SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10290
Annotation
hypothetical_protein_RR46_09970_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 1.022 Mitochondrial   Reliability : 1.326 Nuclear   Reliability : 1.32
 

Sequence

CDS
ATGAAGAAATACGGATCCCGCAATGCTTTATATGATAAGCTGCACAAGGGTGGTGTATTAGTTTGCATCGGATTGACATTGTATGGGACTGTTCTACTCACTGATCACTTTTACAAGTACTTCAAGTATGTGCGGCCACAGATACAAGCATCCAAAGCAGCTGCTGAACAAGAGCTTTTGTCAGAAGGTTCTTCAGAGAAAATTATGTAA
Protein
MKKYGSRNALYDKLHKGGVLVCIGLTLYGTVLLTDHFYKYFKYVRPQIQASKAAAEQELLSEGSSEKIM

Summary

EMBL
RSAL01000168    RVE45241.1    ODYU01005610    SOQ46634.1    KQ459232    KPJ02767.1    + More
KQ461155    KPJ08166.1    JTDY01012630    KOB52244.1    AGBW02009056    OWR51788.1    GAIX01006298    JAA86262.1    CP012528    ALC48854.1    NEVH01014835    PNF27602.1    CH916370    EDW00374.1    OUUW01000003    SPP78710.1    GL452770    EFN76858.1    CH480825    EDW43944.1    CH902632    EDV32764.1    CM000162    KRK06139.1    CH940653    EDW62445.1    CH379063    EAL32283.1    CH479205    EDW30772.1    EDX01402.1    CH954183    EDV45584.1    PYGN01001573    PSN33966.1    KK853191    KDR10027.1    KQ981993    KYN30875.1    CH964291    EDW86237.1    AJVK01066748    CH477516    EAT39695.1    CH933810    EDW07721.1    JXUM01027213    GAPW01006805    GAPW01006804    KQ560783    JAC06793.1    JAC06794.1    KXJ80905.1    GAPW01006673    JAC06925.1    GFDF01002056    JAV12028.1    AE014298    KX531393    AAF45745.1    AHN59278.1    ANY27203.1    KK107405    EZA51224.1    BT023692    AAY85092.2    AXCM01012581    KC632414    AGM32228.1    APCN01000403    LBMM01000590    KMQ98006.1    JRES01000955    KNC26793.1    AAAB01008859    EAA44933.4    EGK96888.1    GFDG01002609    JAV16190.1    GANO01004252    JAB55619.1    AJWK01030266    KQ981153    KYN09063.1    GL434853    EFN74425.1    KQ982562    KYQ54951.1    ATLV01016645    KE525099    KFB41504.1    AXCN02000213    GGFL01005983    MBW70161.1    ADMH02001552    ETN62088.1    GGFK01011972    MBW45293.1    GGFJ01011361    MBW60502.1    KQ977041    KYN06153.1    GGFM01008321    MBW29072.1    GAMD01002515    JAA99075.1    KQ976424    KYM88564.1    CVRI01000002    CRK86915.1    KZ288203    PBC33399.1    GDAI01001843    JAI15760.1    LNIX01000004    OXA55437.1    KQ414617    KOC68164.1    GFDL01007714    JAV27331.1    JXJN01005462    GFDL01007713    JAV27332.1    DS232413    EDS41453.1    GFTR01000292    JAW16134.1    CCAG010000155    RQTK01000035    RUS90331.1    KQ434977    KZC12887.1    UZAM01016086    VDP41729.1    KL363639    KL367480    KN538437    KFD45215.1    KFD71765.1    KHJ40488.1    GL732525    EFX89039.1    UFQS01000611    UFQS01004199    UFQT01000611    UFQT01004199    SSX05380.1    SSX35566.1   
Pfam
PF14880   COX14        + More
PF00810   ER_lumen_recept
Interpro
IPR029208   COX14        + More
IPR000133   ER_ret_rcpt       
IPR029068   Glyas_Bleomycin-R_OHBP_Dase       
IPR037523   VOC       
IPR017515   MeMalonyl-CoA_epimerase       
SUPFAM
SSF54593   SSF54593       
Gene 3D

Ontologies

Topology

Length:
69
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.08709
Exp number, first 60 AAs:
19.08709
Total prob of N-in:
0.89053
POSSIBLE N-term signal
sequence
inside
1  -  16
TMhelix
17  -  34
outside
35  -  69
 
 

Population Genetic Test Statistics

Pi
17.673958
Theta
13.666746
Tajima's D
0.933754
CLR
0.083617
CSRT
0.649417529123544
Interpretation
Uncertain
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