SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10287
Pre Gene Modal
BGIBMGA007294
Annotation
hypothetical_protein_RR48_12910_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 1.216 Mitochondrial   Reliability : 1.22 PlasmaMembrane   Reliability : 1.146
 

Sequence

CDS
ATGTACAACGAGTCCCTGAGCGCTCCGGTCGGGTGTCTGCTCGACTACTACAGGAAACAGGGCCTTATCACTCTGTTGCCTTGGAAACTGCCGATTGTATCCAAAGCTGAAATTCGGACGGAAGGTCAGTTCGCGGCGTTCAACGACTGCCTGTACCGGTCGATGTCGTCAGCGGGATGGCTGCTCGTCATAGACGTGGACGAAGTCGTGTTGCCGCACCGCGAGCGCACGCTCCTGGCGCTGCTGACGTCACTCCGAGCCTCTTATAATCCACCATCGAAGGCACCATCCGCCTTTCTGTTCCGGAATGCATTCTTCTATTTGCGCTGGGAGGACGACAAGGAGGCGACGGCGCCGCTTACGACGGCTCGCAAGACGCGCCGCTGGGCGACGCCGCACGCGCTCAAAAACCGCAGCAAGTACGCGCTCCGGCCGCGCGACGCCGTCGAGCTCGGGAACCACTTCCTGTGGGAGCTCGCGCCGGGGGCCAGCTCCGTCGGCGTGCCCACCGACAGGGCCTTGCTCCACCACTATAGGATCGCATGCGAATTCGGCGGCATGAACTGTCTGACGGTCCCGTCCACCGTGGACCGAACCGCGCACCGGTGGACCGACGAGCTCCAACAGAGGATAAACACCGAGAGGAAAAGCTTAACCATCGCCTGCCCTACGTAA
Protein
MYNESLSAPVGCLLDYYRKQGLITLLPWKLPIVSKAEIRTEGQFAAFNDCLYRSMSSAGWLLVIDVDEVVLPHRERTLLALLTSLRASYNPPSKAPSAFLFRNAFFYLRWEDDKEATAPLTTARKTRRWATPHALKNRSKYALRPRDAVELGNHFLWELAPGASSVGVPTDRALLHHYRIACEFGGMNCLTVPSTVDRTAHRWTDELQQRINTERKSLTIACPT

Summary

Similarity
Belongs to the mitochondrial carrier (TC 2.A.29) family.
EMBL
BABH01034658    GAIX01009492    JAA83068.1    RSAL01000168    RVE45244.1    KQ461155    + More
KPJ08171.1    KQ459232    KPJ02764.1    NWSH01001964    PCG69553.1    AGBW02010353    OWR48650.1    ODYU01010334    SOQ55364.1    GDQN01008406    JAT82648.1    KI209223    ERL95998.1    KI210211    ERL96193.1    APGK01056523    APGK01056524    APGK01056525    KB741277    ENN71067.1    KQ971357    EFA07701.1    JTDY01001189    KOB74600.1    GBRD01009419    JAG56405.1    PYGN01001528    PSN34263.1    ACPB03024204    NEVH01019962    PNF22202.1    LBMM01002228    KMQ95103.1    KQ435912    KOX68887.1    GALX01002813    JAB65653.1    GL452471    EFN77152.1    DS235756    EEB16432.1    KQ981724    KYN37234.1    KQ980662    KYN14718.1    KQ982877    KYQ49706.1    ADTU01014492    GL888147    EGI66551.1    KQ760116    OAD61936.1    KQ414665    KOC65149.1    KQ976750    KYN08643.1    KK107167    QOIP01000010    EZA56465.1    RLU18004.1    GL765555    EFZ16113.1    KQ976514    KYM82272.1    GL442519    EFN63372.1    MWRG01004607    PRD30390.1    KZ288400    PBC26295.1    GEDC01022264    JAS15034.1    JH431835    GFXV01007559    MBW19364.1    IAAA01024131    IAAA01024132    LAA07579.1    LJIG01009231    KRT83494.1    GBYB01011665    GBYB01011666    JAG81432.1    JAG81433.1    ABLF02029442    ABLF02029452    QCYY01001764    ROT75502.1    CH477334    EAT43262.1    JXUM01073095    JXUM01073096    JXUM01073097    KQ562757    KXJ75186.1    KK118113    KFM72270.1    AAAB01008980    EAA14595.4    APCN01001621    ADMH02000334    ETN66920.1    GECU01015169    JAS92537.1    AJWK01020041    GECZ01020612    JAS49157.1    AXCN02001976    GEBQ01013658    GEBQ01004913    JAT26319.1    JAT35064.1    AXCM01001131    ATLV01017751    KE525185    KFB42425.1    LJIJ01000473    ODM97098.1    DS232291    EDS39210.1    GFDF01001560    JAV12524.1    GL732541    EFX81935.1    AJVK01014079    AJVK01014080    GDIP01162638    JAJ60764.1    GDIP01132272    JAL71442.1    GDIQ01202357    JAK49368.1    KK122373    KFM82603.1    LNIX01000002    OXA60765.1    LRGB01002121    KZS09014.1    GBYB01008565    JAG78332.1    GDIQ01150705    JAL01021.1    GDIP01194927    JAJ28475.1    CH963857    EDW76118.2    GDIP01158630    JAJ64772.1    GDIQ01131677    JAL20049.1    GDIP01040295    JAM63420.1    GDIQ01051355    JAN43382.1    GDIQ01163923    JAK87802.1    GDIQ01009010    JAN85727.1    GDIP01243056    JAI80345.1    GDIP01137286    JAL66428.1   
Pfam
PF01697   Glyco_transf_92        + More
PF00153   Mito_carr
Interpro
IPR008166   Glyco_transf_92        + More
IPR023395   Mt_carrier_dom_sf       
IPR018108   Mitochondrial_sb/sol_carrier       
SUPFAM
SSF103506   SSF103506       
Gene 3D

Ontologies

Topology

Length:
224
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00542
Exp number, first 60 AAs:
0.00264
Total prob of N-in:
0.03160
outside
1  -  224
 
 

Population Genetic Test Statistics

Pi
145.880697
Theta
138.166436
Tajima's D
0.105582
CLR
104.756113
CSRT
0.401029948502575
Interpretation
Uncertain
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