Gene

KWMTBOMO10285  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007267

Annotation

NADH_dehydrogenase_[ubiquinone]_1_beta_subcomplex_subunit_10_[Bombyx_mori]

Location

Bomo_Chr17(-):6773044-6779598      View in EpiBrowser

Full name

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10      

Location in the cell

Cytoplasmic   Reliability : 1.132 Nuclear   Reliability : 1.312

CDS

ATGGTACAAGACGGAAATCCTCCTGATGATAATGTGTTTAGAGCATTTTGCAATGCTCTCTACAATACAGTCGATGCTCCGGTAACATGGTTCCGAGAAACTGTTGTCGAACCAAACCAGAAGAAGTACCCTTGGTATCATCAAAACTACCGTCGTGTACCGACTATTGACCAGTGCTACGACGACGACGTCGTTTGCGACTTTGAGGCTAATGCTCAATTTAAACGAGACAGGGCAGTAGACTCTGAGATATTAAGCATTCTTAGGCAACGCTATGAAGATTGCATGATGTATGAGCAACCAGACCATGCAACTAAATGCAGGTCTCTTTGGGACAAGTACAAGTCTGCTGAGGAAGCTTGGTTCATTAAATATGGTGACCTCGGTGCTTATGGTGATGCGCGAAAAGCTTACATGAAGCAGAAGCATCGCATGGTCTGGGAACGACGCAATGGTCCCTTATCAGACCTTACAAAGTGA

Protein

MVQDGNPPDDNVFRAFCNALYNTVDAPVTWFRETVVEPNQKKYPWYHQNYRRVPTIDQCYDDDVVCDFEANAQFKRDRAVDSEILSILRQRYEDCMMYEQPDHATKCRSLWDKYKSAEEAWFIKYGDLGAYGDARKAYMKQKHRMVWERRNGPLSDLTK

Description

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).

Subunit

Complex I is composed of 45 different subunits.

Similarity

Belongs to the complex I NDUFB10 subunit family.

Keywords

Complete proteome   Direct protein sequencing   Electron transport   Membrane   Mitochondrion   Mitochondrion inner membrane   Reference proteome   Respiratory chain   Transport  

Feature

chain  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10

Uniprot

Q1HPL8   S4PWZ7   A0A212EM25   A0A194QX41   A0A194QH76   A0A2H1WLI3   + More
A0A1E1W6L6   A0A2A4JHN4   A0A1A9WKT1   A0A182LUK1   A0A182QR70   B0WCI6   A0A1A9ZDC7   A0A182K359   A0A182MZA3   Q7Q3A0   Q17JZ6   A0A023EHR6   A0A182X1G9   A0A182VC00   A0A182L2L6   A0A182IEE9   A0A023EHN2   A0A1Q3FJ54   T1E870   A0A2M3Z5E6   A0A2M4AAW3   A0A2M4CZ70   A0A182PJQ0   T1PBS2   A0A0K8TNN0   T1E348   A0A1L8EEY8   A0A0L0C689   A0A0M5J1G1   A0A0M4E3X1   A0A1L8E0K2   A0A1B0CKK0   A0A1L8E0F1   A0A1I8PIH3   A0A1B0F9N9   A0A1A9XL36   A0A1B0B7Q3   A0A1A9V9T0   A0A1J1I0F5   B4NXX1   B4INK6   A0AQ35   Q9VQR2   W8BLU7   A0AQ24   B3MP23   A0A3B0JA55   B4MU32   A0A336MMU1   A0A0P4VN49   R4G7W4   A0A034WKY3   Q29MC0   B4G9G5   A0A1W4UU52   A0A0A9YKT9   B4KHH7   B3N326   B4LTX8   B4JBH3   C4N167   A0A0A1XCY9   D6WWB4   A0A023F817   A0A0K8VBB3   A0A0V0G624   A0A069DPK6   A0A2R7X1Q7   A0A1Y1MRR1   A0A1B6DSM6   A0A067RIY0   U5EWT9   N6UB84   J3JZ58   A0A0P4WJ44   A0A3R7MJN5   A0A1W4WUT3   B4Q9K7   A0A1B0DNQ8   A0A0L7R8R0   V9IMC1   A0A2A3EDM5   T1J1T5   E2BMC3   A0A1B6M7K7   A0A3L8DM95   E2AWW2   A0A087ZXL3   A0A0A1CMK0   A0A151JUE8   A0A1B6JN66   A0A026W0K4   A0A195DL42   A0A232EY78  

Pubmed

11280994    23622113    22118469    26354079    12364791    14747013    + More
17210077    17510324    24945155    20966253    25315136    26369729    24330624    26108605    17994087    17550304    16951084    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    19126864    26109357    26109356    24495485    18057021    27129103    25348373    15632085    25401762    26823975    19576987    25830018    18362917    19820115    25474469    26334808    28004739    24845553    23537049    22516182    20798317    30249741    24508170    28648823   

EMBL

DQ443384    ABF51473.1    GAIX01005918    JAA86642.1    AGBW02013944    OWR42533.1    + More
KQ461155    KPJ08141.1    KQ459232    KPJ02796.1    ODYU01009447    SOQ53888.1    GDQN01008449    JAT82605.1    NWSH01001441    PCG71228.1    AXCM01003708    AXCM01003709    AXCN02002070    DS231888    EDS43557.1    AAAB01008964    EAA12342.3    CH477229    EAT47004.1    GAPW01005204    JAC08394.1    APCN01005201    GAPW01005203    JAC08395.1    GFDL01007428    JAV27617.1    GAMD01002432    JAA99158.1    GGFM01002985    MBW23736.1    GGFK01004603    MBW37924.1    GGFL01006323    MBW70501.1    KA645560    AFP60189.1    GDAI01001606    JAI15997.1    GALA01000695    JAA94157.1    GFDG01001696    JAV17103.1    JRES01000842    KNC27800.1    CP012523    ALC38968.1    ALC38408.1    GFDF01001875    JAV12209.1    AJWK01016343    GFDF01001874    JAV12210.1    CCAG010005376    JXJN01009699    CVRI01000037    CRK93675.1    CM000157    EDW87542.1    KRJ97203.1    CH676463    EDW44615.1    AM294773    CM002910    CAL26759.1    KMY87896.1    AE014134    AY060865    AY113547    AM294761    AM294763    AM294767    AM294769    AM294772    FM245890    FM245891    FM245892    FM245894    FM245895    FM245896    FM245897    FM245898    AAF51103.1    AAL28413.1    AAM29552.1    AAN10369.1    CAL26747.1    CAL26749.1    CAL26753.1    CAL26755.1    CAL26758.1    CAR93816.1    CAR93817.1    CAR93818.1    CAR93820.1    CAR93821.1    CAR93822.1    CAR93823.1    CAR93824.1    GAMC01004495    JAC02061.1    AM294762    AM294764    AM294765    AM294766    AM294768    AM294770    AM294771    FM245893    CAL26748.1    CAL26750.1    CAL26751.1    CAL26752.1    CAL26754.1    CAL26756.1    CAL26757.1    CAR93819.1    CH902620    EDV31189.1    KPU73258.1    OUUW01000004    SPP79174.1    CH963852    EDW75621.1    UFQT01001740    UFQT01003943    SSX31606.1    SSX35382.1    GDKW01002286    JAI54309.1    ACPB03011663    GAHY01002017    JAA75493.1    GAKP01004509    JAC54443.1    CH379060    EAL33774.3    CH479180    EDW28995.1    GBHO01011358    GBRD01006410    GDHC01005355    JAG32246.1    JAG59411.1    JAQ13274.1    CH933807    EDW11241.1    CH954177    EDV57625.1    KQS70045.1    CH940649    EDW64029.1    KRF81396.1    CH916368    EDW03996.1    EZ048840    ACN69132.1    GBXI01016676    GBXI01005964    JAC97615.1    JAD08328.1    KQ971361    EFA09231.1    GBBI01001307    JAC17405.1    GDHF01021869    GDHF01016504    GDHF01011136    GDHF01001639    JAI30445.1    JAI35810.1    JAI41178.1    JAI50675.1    GECL01003309    JAP02815.1    GBGD01003268    JAC85621.1    KK856086    PTY24825.1    GEZM01023426    JAV88392.1    GEDC01008635    JAS28663.1    KK852478    KDR22988.1    GANO01002817    JAB57054.1    APGK01035705    APGK01035706    KB740928    KB632428    ENN77916.1    ERL95416.1    BT128539    AEE63496.1    GDRN01042869    JAI67011.1    QCYY01000534    ROT84484.1    CM000361    EDX03618.1    AJVK01017678    KQ414631    KOC67229.1    JR052564    AEY61726.1    KZ288288    PBC29329.1    JH431789    GL449185    EFN83152.1    GEBQ01008060    JAT31917.1    QOIP01000006    RLU21446.1    GL443425    EFN62082.1    KM275727    KM275757    AIX97483.1    AIX97513.1    KQ981745    KYN36187.1    GECU01006995    JAT00712.1    KK107503    EZA49570.1    KQ980762    KYN13566.1    NNAY01001707    OXU23168.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000218220    UP000091820    + More
UP000075883    UP000075886    UP000002320    UP000092445    UP000075881    UP000075884    UP000007062    UP000008820    UP000076407    UP000075903    UP000075882    UP000075840    UP000075885    UP000095301    UP000037069    UP000092553    UP000092461    UP000095300    UP000092444    UP000092443    UP000092460    UP000078200    UP000183832    UP000002282    UP000001292    UP000000803    UP000007801    UP000268350    UP000007798    UP000015103    UP000001819    UP000008744    UP000192221    UP000009192    UP000008711    UP000008792    UP000001070    UP000007266    UP000027135    UP000019118    UP000030742    UP000283509    UP000192223    UP000000304    UP000092462    UP000053825    UP000242457    UP000008237    UP000279307    UP000000311    UP000005203    UP000078541    UP000053097    UP000078492    UP000215335   

PRIDE

Q1HPL8    A0AQ24   

Pfam

PF10249   NDUFB10        + More
PF05456   eIF_4EBP
PF00634   BRCA2

Interpro

IPR019377   NADH_UbQ_OxRdtase_su10        + More
IPR039993   NDUFB10       
IPR008606   EIF4EBP       
IPR002093   BRCA2_repeat       
IPR020163   Complex_I_NDUFS6       

ProteinModelPortal

Q1HPL8   S4PWZ7   A0A212EM25   A0A194QX41   A0A194QH76   A0A2H1WLI3   + More
A0A1E1W6L6   A0A2A4JHN4   A0A1A9WKT1   A0A182LUK1   A0A182QR70   B0WCI6   A0A1A9ZDC7   A0A182K359   A0A182MZA3   Q7Q3A0   Q17JZ6   A0A023EHR6   A0A182X1G9   A0A182VC00   A0A182L2L6   A0A182IEE9   A0A023EHN2   A0A1Q3FJ54   T1E870   A0A2M3Z5E6   A0A2M4AAW3   A0A2M4CZ70   A0A182PJQ0   T1PBS2   A0A0K8TNN0   T1E348   A0A1L8EEY8   A0A0L0C689   A0A0M5J1G1   A0A0M4E3X1   A0A1L8E0K2   A0A1B0CKK0   A0A1L8E0F1   A0A1I8PIH3   A0A1B0F9N9   A0A1A9XL36   A0A1B0B7Q3   A0A1A9V9T0   A0A1J1I0F5   B4NXX1   B4INK6   A0AQ35   Q9VQR2   W8BLU7   A0AQ24   B3MP23   A0A3B0JA55   B4MU32   A0A336MMU1   A0A0P4VN49   R4G7W4   A0A034WKY3   Q29MC0   B4G9G5   A0A1W4UU52   A0A0A9YKT9   B4KHH7   B3N326   B4LTX8   B4JBH3   C4N167   A0A0A1XCY9   D6WWB4   A0A023F817   A0A0K8VBB3   A0A0V0G624   A0A069DPK6   A0A2R7X1Q7   A0A1Y1MRR1   A0A1B6DSM6   A0A067RIY0   U5EWT9   N6UB84   J3JZ58   A0A0P4WJ44   A0A3R7MJN5   A0A1W4WUT3   B4Q9K7   A0A1B0DNQ8   A0A0L7R8R0   V9IMC1   A0A2A3EDM5   T1J1T5   E2BMC3   A0A1B6M7K7   A0A3L8DM95   E2AWW2   A0A087ZXL3   A0A0A1CMK0   A0A151JUE8   A0A1B6JN66   A0A026W0K4   A0A195DL42   A0A232EY78  

PDB

5LNK     E-value=1.07763e-20,     Score=241

KEGG

733018    K03966 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10 | (RefSeq) NADH dehydrogenase (u

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0070469   GO:0005743   GO:0055114   GO:0005747   GO:0045947   GO:0008190   GO:0003743   GO:0005739   GO:0003954   GO:0006120   GO:0008137  

PANTHER

PTHR13094  

Subcellular location

Mitochondrion inner membrane  

Length:

159

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03287

Exp number, first 60 AAs:

0.03248

Total prob of N-in:

0.08896

outside

1  -  159

 

 

Pi

27.096339

Theta

39.734007

Tajima's D

-0.8329

CLR

116.550675

CSRT

0.166741662916854

Interpretation

Uncertain