SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10281
Pre Gene Modal
BGIBMGA007291
Annotation
hypothetical_protein_KGM_20977_[Danaus_plexippus]
Location
Bomo_Chr17(+):6717009-6727076      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.871
 

Sequence

CDS
ATGACTACGTCTCCTACCAGAACAAAACAGAAATTGTCTTTGCGGAAACGGTTATTCGTAAAAAAGTCTCCTCGAGTCGGTTGCTATGTTGATACAGAATCAAACGATGAATTTTCTCAGTCCACGTCTCGGCCCATATCGCCCGCGGATCCTTTTTTAGCTCAAAGTGCGCAGCATATCGAAACCAGTGTAGAAGCGATAGATAATCAACGAAATGCTAGTGCTGAACCACTTTCCCAGAATAGTAGTCACGGTGTCAGTCACAACCAAAGAGAAGAGGAGATCAACCCTAAATGCTGCCGTACCTTCTTTAGAAGATCTCGACCCAAGAGCTTAGTAGATGGAGGTCATTCCAAAGATGAACAGTGTCCAGATACATCCAGAGGTTGCAGTCCAGTATCGAATTCTATTAATAGTTTAAGTGACCAAACTATTTCTCAAACGAAATCAGACGAAATACCCAAAGCAACTATCAAATTTCCTAAAAGTGATGATTCAAAAAAGAGCTTTGAACATTCTGGTTCATTTGAGGGCATCAAAACAAAAAATAAACTCTTTGTCAAACGTTTATCAGCTGATCATCTGATTTCTACTGAAAGCAAACCACTATTTCGTTCTTCATCTCCCGAGAGTGATAGGAGTAGTTCTCTAGATCGTAAAAGAAGAAGTAAATCAACAATAACCCGGTCTGCTTCTCGTGCGGGTAGCACTGATAGCTTAGCACGTAACTCTTTGCTTGCTGCACAGGTGCTACGCCTCATACCCACACAAGAAGCTCGTGAAAGAAATTACCTTTATGGTAGACTTGCCTCACATTCACTCCTCGGCGCAGCTGAACTAGAACATGTTTTTCCTGATAGAGAAGTCAAGATATTTGTTGGCTCATGGAACATGAATGGGCAAGCACCGCCAAGAGAGTTGGCTGATTTTATATTTCCCGACCAAATTAAACATGTACCAGACGTGTTTGCTATAGGAACTCAAGAGTCATACTCAGAACGTACTGAATGGGAGATAACCATACAGGAGCTTTTGGGACCATCTCATTTGTTACTACATTCATATTATCTAGGTACAATACATCTTGCGATATTCATCCGGAGAGACTTAATCTGGTTCTGCTCTCTGCCCGAAGACGCCAGTTTGTCGGTCCGTCCCGGGACAGCGTTTCGTACGAAGGGCGCCGTAGCGATCTCCTTCGCTCTATTCGGATCGACCTTTCTGTTCGTGACCGCCCATTTGACGGCGCACCAAGAGAAGGTCAAAGAAAGGGTTTCGGATATAAAGAGAATCATCAGAGCTATTGATTTACCGAAGAACTTACCGTGTCGTCACAAGAGTAAAGATGTCACGAATAATTTCGACTACGTGTTTTGGTGTGGGGATCTTAATTTTAGACTGGGCGAGCCGAGAGCAGCGGTGCTGAGATGGATCGAACAAACTCAGTTTCCTTTGCCTCCGTACTTACCTCATGGGCTTTTGCACGCCGACCAACTGACAGCCGTATTAGAGGACGGCGCTGCATTCAGGGACTTCAGAGAGGCCCCGATAACATTTCCTCCTACTTACAAGTACGATCCCGGAAGTCAACAATTCGACACGTCGAGCAAACAGAGGGCGCCAGCGTACACGGACCGGATACTGTATAAATCGAGAACCATGGCCAATAACTCTACCTCGGCCTTTTCAGGTCTTCGTCGCATCAGCGCGGTCCCGGTGTCGTCAGGCGTGAAGTGTCTCGCGTACAACTCTGTGCAGTCGGTGTGCACGAGCGACCACAAACCGGTCTGGGCTTTGTTCTCCACGACGCTGCGTCCCGGCACCGATGTAGTGCCATTAGCTGCTGGCTTATTCAATCGTGAAGTTTACCTGGAAGGTATAAAACGCCGGCGGGCACTCCTCGACCACGCCCCCGGTACGTCAGCCGTTTGCAACGTACAATAA
Protein
MTTSPTRTKQKLSLRKRLFVKKSPRVGCYVDTESNDEFSQSTSRPISPADPFLAQSAQHIETSVEAIDNQRNASAEPLSQNSSHGVSHNQREEEINPKCCRTFFRRSRPKSLVDGGHSKDEQCPDTSRGCSPVSNSINSLSDQTISQTKSDEIPKATIKFPKSDDSKKSFEHSGSFEGIKTKNKLFVKRLSADHLISTESKPLFRSSSPESDRSSSLDRKRRSKSTITRSASRAGSTDSLARNSLLAAQVLRLIPTQEARERNYLYGRLASHSLLGAAELEHVFPDREVKIFVGSWNMNGQAPPRELADFIFPDQIKHVPDVFAIGTQESYSERTEWEITIQELLGPSHLLLHSYYLGTIHLAIFIRRDLIWFCSLPEDASLSVRPGTAFRTKGAVAISFALFGSTFLFVTAHLTAHQEKVKERVSDIKRIIRAIDLPKNLPCRHKSKDVTNNFDYVFWCGDLNFRLGEPRAAVLRWIEQTQFPLPPYLPHGLLHADQLTAVLEDGAAFRDFREAPITFPPTYKYDPGSQQFDTSSKQRAPAYTDRILYKSRTMANNSTSAFSGLRRISAVPVSSGVKCLAYNSVQSVCTSDHKPVWALFSTTLRPGTDVVPLAAGLFNREVYLEGIKRRRALLDHAPGTSAVCNVQ

Summary

Uniprot
A0A2A4J035   A0A3S2NDK2   A0A2A4IZH2   A0A2H1WLC4   A0A194QH81   A0A194QRM1   + More
A0A212EM29   H9JCP5  
Pubmed
26354079    22118469    19121390   
EMBL
NWSH01004502    PCG65038.1    RSAL01000189    RVE44732.1    PCG65039.1    ODYU01009447    + More
SOQ53883.1    KQ459232    KPJ02801.1    KQ461155    KPJ08137.1    AGBW02013944    OWR42529.1    BABH01034651    BABH01034652    BABH01034653   
Proteomes
UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    UP000005204    + More
PRIDE
H9JCP5   
Pfam
PF03372   Exo_endo_phos
Interpro
IPR005135   Endo/exonuclease/phosphatase        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR000300   IPPc       
SUPFAM
SSF56219   SSF56219       
Gene 3D
3.60.10.10    
ProteinModelPortal
A0A2A4J035   A0A3S2NDK2   A0A2A4IZH2   A0A2H1WLC4   A0A194QH81   A0A194QRM1   + More
A0A212EM29   H9JCP5  
PDB
2XSW     E-value=6.00531e-82,     Score=777

Ontologies

KEGG
101740091    K20278 inositol polyphosphate 5-phosphatase INPP5E [EC:3.1.3.36] | (RefSeq) 72 kDa inositol polyphos
PATHWAY
00562    Inositol phosphate metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04070    Phosphatidylinositol signaling system - Bombyx mori (domestic silkworm)
GO
GO:0016787   GO:0046856   GO:0016021   GO:0016020   GO:0015935   GO:0004812   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

Topology

Length:
647
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
17.48303
Exp number, first 60 AAs:
0
Total prob of N-in:
0.37328
outside
1  -  647
 
 

Population Genetic Test Statistics

Pi
205.54328
Theta
158.648759
Tajima's D
0.840493
CLR
0.021917
CSRT
0.615219239038048
Interpretation
Uncertain
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