Gene

KWMTBOMO10278

Pre Gene Modal

BGIBMGA007290

Annotation

PREDICTED:_uncharacterized_protein_LOC101739820?_partial_[Bombyx_mori]

Location

Bomo_Chr17(+):6701459-6705745      View in EpiBrowser

Full name

Chloride channel protein      

Location in the cell

PlasmaMembrane   Reliability : 4.052

CDS

ATGCTACAGAGAAATAGTAGTGAAGGTATTTTTATACAATCAATGGATGATATAATGGATTATGATAAGTTAAAATTTGAGCATCAAGAACATCAGATTTTATTATTGGTGGATTTGAGATGCCTGAATCAGAGTAAGAATATGGCAAAGATAACTGATTATCTACAATCCGGTGCACCGTTTCGATGGATCTTTATTAGTAACACTGAAATCGAAAACCTCATTCCACCAGAAAACACAATAATGAGAATGAACATTTTACCGAATACCGAAGCTTTATTTATTCAAAGAACAGATAATAGATGCTACGAAATCAGTATGGTTTACAAAATCGGAACCGAGACTGCATGGAAAACAGAAAAGTACGCTTATTGGAATATGAGTGGAGGTTTTCAGAAAAATACCAACATTAATGAAGTTATAGCTGTAAGGAGACGTGATTTGGAAGGATACGAGATAAAAATTTGTTACGTTTTGACGGACAACGATAGTATTCATCATTTGAGTGATGAAGTGAATGATCATATTGATACGATAACTAAGGTCAATTTCCCAAGCACCAACCATCTGTTAGACTTTCTGAATGCTGAACGAAAATATGTTTTTGTTAATACGTGGGGCTATCGAATTAACGGCACTTGGAATGGACTAACTGGATTTTTGGTAAACGGCGATGTTGAAATTGGAGGGTCACCGATGTTTTTCACTGCAGAACGTACAGCGGTCGTAGATTTCATTTCGAGCCCTACACCAACTCGCTCGAAATTTGTATTTCAACAACCAAAGTTGTCGTATGAAAATAATTTATTTTTACTTTCATTTCGTACAGCCGTCTGGTATAGCACTCTAGCGTTAATCTCCTTAATATTCACAATGTTGCTGGCCGTTACAGCTTGGGAATGGAAGAAGATGTCCCAAATCAAAACGAGAGACATCGATGCTGGCGTACTTAGGCCGAGCGTTACAGATGTTACCATGCTAGTTTTTGGTGCTACTTGCCAACAAGGAAGTACCGTTGAATTAAAAGGTTCGCTCGGTCGTGTCGTAATGTTAATTCTTTTCCTGACCCTTATGTTCCTGTACACTTCATATTCAGCAAATATCGTTGCTTTACTTCAGTCCAGTTCATCCCAAATTAAAACACTGGAAGACCTTTTGCATTCCCGATTGAAATTCGGTGTACACGACACAGTTTTCAATAGATATTACTTTTCAACTGCAGATGAACCTGTTAGGAAAGCAATATATGAAAAGAAAATTGCACCCCCAGGTGTTGCACCTCAGTTTATGTCTATGGAAGAAGGTGTTAAGAAGATGCGTAAGGGTCTGTTCGCATTCCATATGGAAACAGGAGTTGGATATAAATTCGTTGGAAAATATTTCAAAGAAAGCGAAAAATGTGGCTTAAAGGAAATACAATACTTACAAGTCATAGATCCGTGGTTAGCTGTCCGCAAGAACACACCGTACAAGGAAATGTTCAAAATTGGGTAA

Protein

MLQRNSSEGIFIQSMDDIMDYDKLKFEHQEHQILLLVDLRCLNQSKNMAKITDYLQSGAPFRWIFISNTEIENLIPPENTIMRMNILPNTEALFIQRTDNRCYEISMVYKIGTETAWKTEKYAYWNMSGGFQKNTNINEVIAVRRRDLEGYEIKICYVLTDNDSIHHLSDEVNDHIDTITKVNFPSTNHLLDFLNAERKYVFVNTWGYRINGTWNGLTGFLVNGDVEIGGSPMFFTAERTAVVDFISSPTPTRSKFVFQQPKLSYENNLFLLSFRTAVWYSTLALISLIFTMLLAVTAWEWKKMSQIKTRDIDAGVLRPSVTDVTMLVFGATCQQGSTVELKGSLGRVVMLILFLTLMFLYTSYSANIVALLQSSSSQIKTLEDLLHSRLKFGVHDTVFNRYYFSTADEPVRKAIYEKKIAPPGVAPQFMSMEEGVKKMRKGLFAFHMETGVGYKFVGKYFKESEKCGLKEIQYLQVIDPWLAVRKNTPYKEMFKIG

Similarity

Belongs to the chloride channel (TC 2.A.49) family.

Uniprot

A0A386H9K5   A0A1W5LAS2   A0A0F7QIG2   A0A2D0WKS5   A0A0S1TQ33   A0A223HCX7   + More
A0A3S2L3E3   A0A1B3B728   A0A146JYY8   A0A1Q1PP98   A0A2H1VST4   H9A5R2   A0A345BF14   A0A0K8TUD4   A0A223HDB2   E5FIB0   A0A212FEZ5   A0A140G9H5   A0A2A4IYY8   A0A2K8GL75   A0A076E9E7   A0A194QBG6   A0A194QT07   A0A0U3C6J1   A0A0S3J2Z8   A0A1B3B7C4   A0A182XCS1   A0A182RN63   A0A182PN91   A0A182HM47   A0A223HCY5   A0A0F7QIG0   A0A345BF17   A0A2A4IZW1   A0A182NM91   A0A223HDB5   A0A182M3R5   A0A1Q1PP97   A0A182Y0V0   A0A139WJQ1   A0A182GL17   Q178H7   A0A182TLZ3   A0A1S4FBU2   H9A5R6   F5HLW5   A0A1J0KKU9   Q7Q771   A0A1J1IJ30   A0A1W6L166   D6X2Y3   A0A182FFC7   A0A0C5DMP4   U4UF86   N6U3W0   A0A1V1WBQ2   A0A182KER7   A0A2D0WKS7   A0A2K8GL72   A0A182J1B5   A0A2P9JY95   A0A084W2V2   A0A2H1VRQ6   A0A1J0KKK8   A0A310SDV6   A0A1B1FKH3   A0A146JVT1   A0A0E3Y709   A0A2H4ZBE9   A0A0K8TUC6   A0A067R2S3   A0A140G9H6   A0A0U5APN7   A0A067QZN3   A0A2P8YXS4   Q16HB2   A0A2P8YXT7   A0A1B3P5F9   A0A2P8YXT1   A0A2P8XXS9   A0A182GF22   A0A182QH81   A0A232FEK6   A0A140G9H3   A0A1J0KL22   A0A1Q1PP74   A0A182FF56   A0A2J7QJP5   A0A2J7QJP1  

Pubmed

25803580    26812239    28150741    22363688    27006164    29727827    + More
26017144    21091811    22118469    27004525    29375398    24998398    26354079    26657286    26626891    27171401    25244985    18362917    19820115    26483478    17510324    12364791    27836740    25665775    23537049    24438588    25856077    29133804    24845553    26760975    29403074    27538507    28648823   

EMBL

MG546648    AYD42271.1    KT991368    ANA75034.2    LC017794    BAR64808.1    + More
KY019179    ARB05668.1    KR912013    ALM24940.1    KY283576    AST36236.1    RSAL01000189    RVE44730.1    KT588085    AOE47995.1    GEDO01000005    JAP88621.1    KY325456    AQM73617.1    ODYU01004051    SOQ43532.1    JN836712    AFC91752.1    MG820667    AXF48838.1    GCVX01000138    JAI18092.1    KY283705    AST36364.1    HM562974    ADR64685.1    AGBW02008878    OWR52312.1    KU702627    AMM70654.1    NWSH01004502    PCG65035.1    KY225535    ARO70547.1    KF487731    AII01129.1    KQ459232    KPJ02802.1    KQ461155    KPJ08135.1    KP975110    ALT31629.1    KT381535    ALR72541.1    KU291857    AOE48107.1    APCN01004347    KY283575    AST36235.1    LC017789    BAR64803.1    MG820670    AXF48841.1    PCG65036.1    KY283704    AST36363.1    AXCM01010715    KY325455    AQM73616.1    KQ971338    KYB28047.1    JXUM01071488    KQ562666    KXJ75363.1    CH477363    EAT42606.1    JN836716    AFC91756.2    AAAB01008960    EGK97276.1    KX298830    APC94347.1    EAA11187.5    CVRI01000054    CRL00245.1    KX609444    KB465935    ARN17851.1    RLZ02208.1    KQ971372    EFA10663.2    KP296776    AJO62240.1    KB632161    ERL89256.1    APGK01043551    APGK01043552    APGK01043553    KB741015    ENN75306.1    GENK01000124    JAV45789.1    KY019178    ARB05667.1    KY225540    ARO70552.1    KY817085    AVH87301.1    ATLV01019703    KE525278    KFB44546.1    SOQ43533.1    KX290685    APC94256.1    GGOB01000048    MCH29444.1    KT268301    ANQ46495.1    GEDO01000004    JAP88622.1    KM251708    AKC58589.1    MF975509    AUF73085.1    GCVX01000136    JAI18094.1    KK852952    KDR13328.1    KU702628    AMM70655.1    FX982942    BAU20268.1    KK852854    KDR14986.1    PYGN01000296    PSN49053.1    CH478187    EAT33629.1    PSN49052.1    KX655899    AOG12848.1    PSN49051.1    PYGN01001184    PSN36819.1    JXUM01059078    JXUM01059079    JXUM01059080    JXUM01059081    JXUM01059082    KQ562034    KXJ76850.1    AXCN02000940    NNAY01000335    OXU29125.1    KU702625    AMM70652.1    KX298831    APC94348.1    KY325454    AQM73615.1    NEVH01013550    PNF28810.1    PNF28811.1   

Proteomes

UP000283053    UP000007151    UP000218220    UP000053268    UP000053240    UP000076407    + More
UP000075900    UP000075885    UP000075840    UP000075884    UP000075883    UP000076408    UP000007266    UP000069940    UP000249989    UP000008820    UP000075902    UP000007062    UP000183832    UP000069272    UP000030742    UP000019118    UP000075881    UP000075880    UP000030765    UP000027135    UP000245037    UP000075886    UP000215335    UP000235965   

Pfam

PF00060   Lig_chan        + More
PF10613   Lig_chan-Glu_bd
PF02949   7tm_6
PF13639   zf-RING_2
PF00654   Voltage_CLC
PF00571   CBS
PF00497   SBP_bac_3

Interpro

IPR001320   Iontro_rcpt        + More
IPR019594   Glu/Gly-bd       
IPR004117   7tm6_olfct_rcpt       
IPR001841   Znf_RING       
IPR013083   Znf_RING/FYVE/PHD       
IPR000644   CBS_dom       
IPR001807   Cl-channel_volt-gated       
IPR014743   Cl-channel_core       
IPR001638   Solute-binding_3/MltF_N       

SUPFAM

SSF81340   SSF81340       

Gene 3D

3.30.40.10     1.10.3080.10    

ProteinModelPortal

A0A386H9K5   A0A1W5LAS2   A0A0F7QIG2   A0A2D0WKS5   A0A0S1TQ33   A0A223HCX7   + More
A0A3S2L3E3   A0A1B3B728   A0A146JYY8   A0A1Q1PP98   A0A2H1VST4   H9A5R2   A0A345BF14   A0A0K8TUD4   A0A223HDB2   E5FIB0   A0A212FEZ5   A0A140G9H5   A0A2A4IYY8   A0A2K8GL75   A0A076E9E7   A0A194QBG6   A0A194QT07   A0A0U3C6J1   A0A0S3J2Z8   A0A1B3B7C4   A0A182XCS1   A0A182RN63   A0A182PN91   A0A182HM47   A0A223HCY5   A0A0F7QIG0   A0A345BF17   A0A2A4IZW1   A0A182NM91   A0A223HDB5   A0A182M3R5   A0A1Q1PP97   A0A182Y0V0   A0A139WJQ1   A0A182GL17   Q178H7   A0A182TLZ3   A0A1S4FBU2   H9A5R6   F5HLW5   A0A1J0KKU9   Q7Q771   A0A1J1IJ30   A0A1W6L166   D6X2Y3   A0A182FFC7   A0A0C5DMP4   U4UF86   N6U3W0   A0A1V1WBQ2   A0A182KER7   A0A2D0WKS7   A0A2K8GL72   A0A182J1B5   A0A2P9JY95   A0A084W2V2   A0A2H1VRQ6   A0A1J0KKK8   A0A310SDV6   A0A1B1FKH3   A0A146JVT1   A0A0E3Y709   A0A2H4ZBE9   A0A0K8TUC6   A0A067R2S3   A0A140G9H6   A0A0U5APN7   A0A067QZN3   A0A2P8YXS4   Q16HB2   A0A2P8YXT7   A0A1B3P5F9   A0A2P8YXT1   A0A2P8XXS9   A0A182GF22   A0A182QH81   A0A232FEK6   A0A140G9H3   A0A1J0KL22   A0A1Q1PP74   A0A182FF56   A0A2J7QJP5   A0A2J7QJP1  

PDB

6NJN     E-value=2.15828e-10,     Score=159

KEGG

101739820    K05313 glutamate receptor, ionotropic, invertebrate | (RefSeq) uncharacterized LOC101739820

GO

GO:0016020   GO:0004970   GO:0016021   GO:0050911   GO:0004984   GO:0005886   GO:0005549   GO:0004971   GO:0032281   GO:0005247   GO:0015935   GO:0004812   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

Subcellular location

Membrane  

Length:

497

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

47.2024600000001

Exp number, first 60 AAs:

0.00014

Total prob of N-in:

0.08649

outside

1  -  276

TMhelix

277  -  299

inside

300  -  347

TMhelix

348  -  370

outside

371  -  497

 

 

Pi

185.54107

Theta

164.231534

Tajima's D

0.470488

CLR

0.252065

CSRT

0.509424528773561

Interpretation

Uncertain