SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10273  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007286
Annotation
diapause_associated_protein_2_[Antheraea_pernyi]
Full name
Ommochrome-binding protein      
Alternative Name
YCP
Location in the cell
Extracellular   Reliability : 1.166 PlasmaMembrane   Reliability : 1.407
 

Sequence

CDS
ATGAAGCTGATAATTTTGATAACTATAATTGCTTTCGTTCACGGAAACCAAGAAGTGGAAGTACTAAAAGATAATGTGCACAATCCATCCCAACTCGTAGTCGACTACCAAACCAGCACACTGTTCTTCAGTCACTCTTCTTTGTTCGAAGGGAAAACAGTTCTTAAATCCGTTTACTTGAATCTTAACACTAAAGAGTTCGGAGAAATTTCTGGCATCAATTCGGGTATAGCTACTGCATATGATAGAAGCAAACACGTTGTGTACCTCGGTGGACAGGATGGGATATATACATTTGATTACACAACGAAATCTGCAAAGAATTTGCGTGTGACAAGTTACAGCATCTGGCAAATGTTCCATTGTCCCGTCCACGGCCTCTACTTCACGACTTTCAATCCTGACGAAAAAGCGTTTGTCTATTCTTACGGTCAAGTAGGACCTGTACCTGAACTCACCGACATCAAAACAAGATTGATTGCTGTCGGCCAAAAACACGATATATATTTTGCTAACTCCGCTGGTATATTTGTACTGAAAACTATCGATGGAGTCTTGTATAAAATACATTTAGAAACTTTTATTGTTAATGGATTCGCAAGTGACATTAATGGTAAATTATACTTTTCAACTCCGAATGATATTTTTTACATAAATGAAGATGCAGGCACATTGGATCGAGTCATCAGGGTGCAAGAAGGTGAATCTATTTGGGGTGTAGCTTTTGCCGCGGACGGTAGCATGATTTACGCTTTAGATGACAAAATAGTGATGAAGAAAAAAGACTAA
Protein
MKLIILITIIAFVHGNQEVEVLKDNVHNPSQLVVDYQTSTLFFSHSSLFEGKTVLKSVYLNLNTKEFGEISGINSGIATAYDRSKHVVYLGGQDGIYTFDYTTKSAKNLRVTSYSIWQMFHCPVHGLYFTTFNPDEKAFVYSYGQVGPVPELTDIKTRLIAVGQKHDIYFANSAGIFVLKTIDGVLYKIHLETFIVNGFASDINGKLYFSTPNDIFYINEDAGTLDRVIRVQEGESIWGVAFAADGSMIYALDDKIVMKKKD

Summary

Subunit
Monomer.
Keywords
Direct protein sequencing   Glycoprotein   Signal  
Feature
chain  Ommochrome-binding protein
EMBL
BABH01034622    BABH01034621    JQ003184    AFC35301.1    L00975    GAIX01007995    + More
JAA84565.1    AK402000    BAM18622.1    GDQN01005929    JAT85125.1    JTDY01001660    KOB73227.1    JTDY01014199    KOB52046.1    EF083140    ABK22491.1    AY819655    AAV68388.1    AY819652    AAV68385.1    AF169311    AAF89672.1    AGBW02015065    OWR40643.1    AY819654    AAV68387.1    AY819653    AAV68386.1    AY819651    AAV68384.1    JTDY01002489    KOB71312.1    KOB71311.1    JTDY01011636    KOB54879.1    BABH01026891    JTDY01003236    KOB69904.1    AGBW02013802    OWR42795.1    KQ460423    KPJ14850.1    KPJ14832.1    KQ459386    KPJ01209.1    KPJ01224.1    KZ149928    PZC77477.1    AGBW02011018    OWR47363.1    NWSH01001435    PCG71236.1    NWSH01001998    PCG69476.1    KZ150180    PZC72520.1    ODYU01004895    SOQ45238.1    BABH01016630    AGBW02007955    OWR54376.1    KQ459895    KPJ19519.1    KQ461158    KPJ08078.1    PZC72519.1    NWSH01000114    PCG79413.1    JTDY01002898    KOB70521.1    KQ459562    KPI99756.1    KPJ19520.1    KPJ14845.1    JTDY01001487    KOB73748.1    OWR42797.1    AGBW02009212    OWR51334.1    BABH01029428    JTDY01003234    KOB69909.1    KZ149968    PZC76133.1    KPJ01215.1    NWSH01000191    PCG78576.1    KOB69902.1    KQ459602    KPI93453.1    KQ460615    KPJ13703.1    BABH01030111    ODYU01012396    SOQ58682.1    DQ333197    ABC60222.1    OWR42794.1   
Pfam
PF00096   zf-C2H2        + More
PF02995   DUF229
PF07690   MFS_1
Interpro
IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR017850   Alkaline_phosphatase_core_sf       
IPR004245   DUF229       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR036574   Scorpion_toxin-like_sf       
IPR001958   Tet-R_TetA/multi-R_MdtG       
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR011042   6-blade_b-propeller_TolB-like       
SUPFAM
SSF57667   SSF57667        + More
SSF53649   SSF53649       
SSF50998   SSF50998       
SSF57095   SSF57095       
SSF103473   SSF103473       

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.990375
 
 
Length:
262
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.32261
Exp number, first 60 AAs:
0.00313
Total prob of N-in:
0.04297
outside
1  -  262
 
 

Population Genetic Test Statistics

Pi
318.542177
Theta
163.495648
Tajima's D
2.535024
CLR
0.133858
CSRT
0.948602569871506
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26280517 VTSIIDSGSHSAEAIAAAAASFYKK 96.30 8e-15
24402669 VTSSTNDVIQAK 96.30 8e-15
24402669 SKHIYEEK 95.24 7e-08
26822097 ICIAIK 100.00 9e-06
25860555 IEAAGNYGWSYK 100.00 9e-06
26280517 DGSESVIQQINAFAK 100.00 9e-06
24402669 EFGEHVNIVVGGHSHRPESIQR 100.00 9e-06
28467696 EFFYQGHNYFYSGHVPEIANR 100.00 9e-06
29197581 AFVYSYGQVGPVPEITDIK 100.00 9e-06
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