SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10272  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007285
Annotation
diapause_associated_protein_2_[Antheraea_pernyi]
Full name
Ommochrome-binding protein      
Alternative Name
YCP
Location in the cell
PlasmaMembrane   Reliability : 2.084
 

Sequence

CDS
ATGAAGCTGATAATATTGATAACTATAATTGCTTTCGTTCACGGAAACCAAGAAGTGGAAGTACTAAAAGATAATGTGCACAATGCATCCCAACTCGTAGTCGACTACCAAACCAACACACTGTTTTTCAGTCACTCTTCTTTGTTCGAAGGGAAAACAGTTCTTAAATCCGCTTACTTGAACCTTAACACTAAAGAGTTCGGAGAAATATCCGGCATCAATTCGGGCGTAGCTACTGCATATGATAGAAGCAAAAACGTTGTGTACCTTGGTGGACAGGATGGGATATATAAATTTAATCACGCAACGAAATCTGCAAAGAATTTGCGTATCACAAATTACAGCATAAGGCAAATGTTTCATAGTCCCACCCACGGTCTTTTCTTCACGACTTTCAATCCTGAAGAAAAAGCGTTTGTCTACTCCTACGGTCAAGTAGGAGATATTGTACCTGAACTGACCGACATCAAAACAAGTTTAATTGCAGACAGCAAAAAATACAATATATATTTTGCTAATTCCGCTGGCATCTTTGTGCTGACAAATATCAATGGAGTCTTGTTCAAAGTACATTTACATGTTATTCCTGTTAATGGATTCGCAAGTGATTTTGACGATAGATTGTACTTTTCAACTCCGAATGCTATTTTTTTCATCAATGAAAATGGCGGAATATTGGAAGAAGTCTTCAGGGTGGAAGAAAGTGAAACTATTTTGGGACTAGCTTTTACCGCAGACGGTAATATGATCTACGCTTTAGATGACAAAATAATGATGAAAAAAAAATAA
Protein
MKLIILITIIAFVHGNQEVEVLKDNVHNASQLVVDYQTNTLFFSHSSLFEGKTVLKSAYLNLNTKEFGEISGINSGVATAYDRSKNVVYLGGQDGIYKFNHATKSAKNLRITNYSIRQMFHSPTHGLFFTTFNPEEKAFVYSYGQVGDIVPELTDIKTSLIADSKKYNIYFANSAGIFVLTNINGVLFKVHLHVIPVNGFASDFDDRLYFSTPNAIFFINENGGILEEVFRVEESETILGLAFTADGNMIYALDDKIMMKKK

Summary

Subunit
Monomer.
Keywords
Direct protein sequencing   Glycoprotein   Signal  
Feature
chain  Ommochrome-binding protein
EMBL
BABH01034621    BABH01034622    JQ003184    AFC35301.1    L00975    GAIX01007995    + More
JAA84565.1    EF083140    ABK22491.1    GDQN01005929    JAT85125.1    AK402000    BAM18622.1    AY819651    AAV68384.1    AY819655    AAV68388.1    AY819652    AAV68385.1    AF169311    AAF89672.1    AY819653    AAV68386.1    JTDY01014199    KOB52046.1    JTDY01001660    KOB73227.1    AY819654    AAV68387.1    AGBW02015065    OWR40643.1    JTDY01002489    KOB71312.1    KOB71311.1    JTDY01011636    KOB54879.1    BABH01026891    JTDY01003236    KOB69904.1    AGBW02013802    OWR42795.1    KZ149928    PZC77477.1    NWSH01001435    PCG71236.1    ODYU01004895    SOQ45238.1    KQ460423    KPJ14850.1    BABH01016630    KZ150180    PZC72520.1    KQ461158    KPJ08078.1    KQ459562    KPI99756.1    KQ459895    KPJ19519.1    KPJ14832.1    AGBW02011018    OWR47363.1    NWSH01001998    PCG69476.1    KQ459386    KPJ01209.1    OWR42797.1    AGBW02007955    OWR54376.1    JTDY01003234    KOB69909.1    KPJ01224.1    KZ149968    PZC76133.1    KPJ14845.1    PZC72519.1    BABH01026888    KPJ01215.1    JTDY01002898    KOB70521.1    AGBW02009212    OWR51334.1    KOB69902.1    KPJ19520.1    NWSH01000114    PCG79413.1    BABH01029428    KQ460615    KPJ13703.1    JTDY01001487    KOB73748.1    NWSH01000023    PCG80650.1    PCG80651.1    DQ333197    ABC60222.1    BABH01030111    KZ150328    PZC71371.1    OWR42794.1    NWSH01000191    PCG78576.1    LZKJ01000150    OBI43266.1    ODYU01012396    SOQ58682.1    KQ459602    KPI93453.1    RBVL01000152    RKO11428.1    NWSH01000476    PCG76128.1    PCG76130.1    CP031089    AXF97232.1   
Pfam
PF00096   zf-C2H2        + More
PF02995   DUF229
PF07690   MFS_1
Interpro
IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR011047   Quinoprotein_ADH-like_supfam       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR011042   6-blade_b-propeller_TolB-like       
IPR017850   Alkaline_phosphatase_core_sf       
IPR004245   DUF229       
IPR001958   Tet-R_TetA/multi-R_MdtG       
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR036574   Scorpion_toxin-like_sf       
SUPFAM
SSF50998   SSF50998        + More
SSF57667   SSF57667       
SSF53649   SSF53649       
SSF103473   SSF103473       
SSF57095   SSF57095       
PDB
4A2M     E-value=0.0820584,     Score=81

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.989886
 
 
Length:
262
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
6.75248
Exp number, first 60 AAs:
0.01018
Total prob of N-in:
0.19777
outside
1  -  262
 
 

Population Genetic Test Statistics

Pi
176.98462
Theta
198.483639
Tajima's D
-0.340933
CLR
78.692741
CSRT
0.278986050697465
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26280517 DDAEFIPIPY 100.00 5e-06
24402669 EFGEISGINSGIATAYDR 100.00 5e-06
28467696 EFGEISGINSGIATAYDR 100.00 5e-06
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