Gene

KWMTBOMO10269

Annotation

PREDICTED:_uncharacterized_protein_LOC106129568_[Amyelois_transitella]

Location

Bomo_Chr17(+):6336028-6338492      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.537

CDS

ATGCCGATCACCAGGAGCAACAAGGGATCATCGAGGGAACAGCCACTCGAACCTGCGGTTCAAGAATCCAGTCCGGAGGCAACAGAAGCGACGTCGTACGAAACATACGAGAGCTCCGCGACCGGTACGACCCAGAACACAAAACTTGAAGAGGCAACGACGCGGACACGTGGTAAAAATAGACCCGCGTCGAAGAAATCGCTACGACGTAAGGAACTGGCAGCGAGAGCGGAGCTGGCGGAAAAAGAATTGATAGAAGCACAAGCAGCCACCATAGCCGCCAGACTCCGCCTGCAATTGATTCAGGCCGAAAGCGAAGACGACGATGATTCCATTATAGAAGAGCCAAAGGACCGGGAGGACCAGGTCAGGGCCTGGGTCCAGACGTCGGTGGGCAGTATGGACAAGGAGCCCGCAGGCGAGCACATTGAGAACCGTCCCGTCAGCAAGGCCAACATGGAAGAGTGCGGCAACAGGGACCTGGCTAAGGCGATAGTGGAAGCAGTAAGGAGCGCAACGACCAAGGAGCTGCCGCCACAACCCGACTACATGCACCAGTTGCCGACGTTCGAAGGCGACTGCAGGGAGTGGGTGGCCTTCAAGGCTGTCTACGAAGATACCGCTCCACTCTTCTCAAGCGCTCAAAACATGGCGCGGCTGAGAAGAGCGCTGAAGGGACAAGCCAGGGAAGGAGTCCGCAGCCAGCTGTACTCCGAGAGCACACCGGAGGAAGTAATGGAATCACTGCGGCGGTGCTATGGAAGGGCGGACGCTTTAGTCTTAGCGGAGCTAGACCGCATACGAAGGCTTCCAACGATAAGTGACTCCGCCTACGACATTTGCTCACTGGCGAGCAATGTTAACAATACCGTCGCAGCGATCAGGGGACTGCGGAAACCCCAATATTTGATGTCGCCCGAACTGCTGAAGAGCATCGTCGACAAGATGCCGACCATCCTGAGGTTCCGGTGGTACGATCACATTATCGAAAAGACTGAAGGAGACCCGGACCTCAACACGATGTGCGGCTTCCTGAACAAGATGGCGGACCGATGCGGGCCACACGCCGTGGTTGAAGTAGCAACGAAAAGACAACCATCGAGGCGACAGGCGACGCACGCCACAACCGACTGCACCGAGCGTGCAACTTCGGACAGAGCAATGAGGGACAAGCCGGCGTGCCCGCAATGCAAGGATGGACACCCACTATACGACTGTCCGAGGTACAAGGATGCTACGGTGCAGGAACGATGGAGAATGGCAAAGGAGTCGCGCCTGTGTTATAAGTGCCTCGACGGTAAGCACCGGAAGGAAACATGTCAACGACCGCCATGCCGCACGTGCAAGCGCTGGCACCACTACTCGCTACACAACGAGAAGCCGGAGACAGAGCCAGCAGAGAACAGGGAAATCGCGAACAACGTGCGACTTCCCATCAACTGCACACGGATCAGCAGGGCGTACTTGAAGATGGTGCCCGTTGAAGTCTACGGGCCATCGGGATCGACGACGGTGCTGGCCCTGCTGGACGAAGGCTCCACGGTAACTCTCCTGGACTCGAGCGTGGCGAAGCAGATCGGCCTGAAGGGACCCAAGGAGACGCTCCGCCTTGAGACCGTGGGCGGGAAGACCCTAACGAAGAAGGACTCGATGAAGTTTGACATCCGAGTTCGAGGGCTTCACCAGCGGCAGAAGAGGACGATCGTCGGAGCGCGCACAATGGATGACATGAGCCTTGCACCCCAGCGACTAAAGAGGGAAACCATCGAAGGCTACGCGCACCTGAAAAGCCTGGCGGACCAGTTATGTTACGATGAACAATCCCCCCAACTCTTGATCGGGCAGGACAACTGGGGACTCATCGCCGCCAAGACGACGCGCAGGGGCAGGAGGAACCAGCCGGTAGCCTCATTCACCCAATTGGGATGGGTGCTACATGGTCTCGACGGCAACAACGCAAAAGAGGTCAACTTCCTCACCTGCGCCCATGTATCGATGCGCGAAGAGGCCTTGGACAGACTGGTGAAGGAGCACTTCACGATAGAGTCCCACCCAATCGTCCGAGCACGGATATGGAGGCGAAGGCGTTTGACATCTTGTAGAAGGAGGACGACAGTGGTTGGAGACGCGATGACGGCCGCTTCGAAGCTCGGACCTACAATCCCTGTTCGAAGCGTTGTTGCGGTTCCGAAAAAGGCTCGTCATGGTTGTCGCGGACATCAAGGAGAGGTTCCTGCAGATAAGGATCAGGGACGAGGACCGCGACAGCCTGAGATTCCTCTATAG

Protein

MPITRSNKGSSREQPLEPAVQESSPEATEATSYETYESSATGTTQNTKLEEATTRTRGKNRPASKKSLRRKELAARAELAEKELIEAQAATIAARLRLQLIQAESEDDDDSIIEEPKDREDQVRAWVQTSVGSMDKEPAGEHIENRPVSKANMEECGNRDLAKAIVEAVRSATTKELPPQPDYMHQLPTFEGDCREWVAFKAVYEDTAPLFSSAQNMARLRRALKGQAREGVRSQLYSESTPEEVMESLRRCYGRADALVLAELDRIRRLPTISDSAYDICSLASNVNNTVAAIRGLRKPQYLMSPELLKSIVDKMPTILRFRWYDHIIEKTEGDPDLNTMCGFLNKMADRCGPHAVVEVATKRQPSRRQATHATTDCTERATSDRAMRDKPACPQCKDGHPLYDCPRYKDATVQERWRMAKESRLCYKCLDGKHRKETCQRPPCRTCKRWHHYSLHNEKPETEPAENREIANNVRLPINCTRISRAYLKMVPVEVYGPSGSTTVLALLDEGSTVTLLDSSVAKQIGLKGPKETLRLETVGGKTLTKKDSMKFDIRVRGLHQRQKRTIVGARTMDDMSLAPQRLKRETIEGYAHLKSLADQLCYDEQSPQLLIGQDNWGLIAAKTTRRGRRNQPVASFTQLGWVLHGLDGNNAKEVNFLTCAHVSMREEALDRLVKEHFTIESHPIVRARIWRRRRLTSCRRRTTVVGDAMTAASKLGPTIPVRSVVAVPKKARHGCRGHQGEVPADKDQGRGPRQPEIPL

Uniprot

Q2MGA5   A0A2H1W036   V9GZQ1   A0A3S2N5J7   A0A2A4IX21   H9JNE5   + More
A0A0L7KW57   A0A0L7L0N3   A0A0A9ZAM6   A0A0A9ZJ56   A0A0A9ZFI6   A0A0L7KYG1   A0A0A9ZGM2   A0A0A9ZDG1   A0A182H5B8   A0A182GC70   A0A226DH22   A0A182HDB0   A0A226E2P7   A0A226EEI4   A0A226EDU9   A0A182RWX5   Q76C94   Q76C95   O02006   A0A182HEF9   A0A2M4CKZ8   A0A1L8DIN5   A0A1L8DJ10   A0A226D278   A0A226EKF8   A0A1W7R6D5   A0A1W7R699  

Pubmed

8389039    19121390    26227816    25401762    26483478    8925473    + More

EMBL

AF530470    AAQ09229.1    ODYU01005530    SOQ46470.1    L09635    AAA75005.1    + More
RSAL01000375    RVE42106.1    NWSH01005440    PCG64209.1    BABH01019236    JTDY01005167    KOB67301.1    JTDY01003744    KOB69058.1    GBHO01002130    JAG41474.1    GBHO01000309    JAG43295.1    GBHO01000310    JAG43294.1    JTDY01004423    KOB68175.1    GBHO01000308    JAG43296.1    GBHO01000307    JAG43297.1    JXUM01111221    KQ565482    KXJ70922.1    JXUM01053894    KQ561796    KXJ77517.1    LNIX01000019    OXA44855.1    JXUM01034199    KQ561015    KXJ80028.1    LNIX01000007    OXA52015.1    LNIX01000004    OXA55241.1    OXA55408.1    AB110069    BAD01590.1    BAD01589.1    D83207    BAA57030.1    JXUM01005879    KQ560203    KXJ83865.1    GGFL01001727    MBW65905.1    GFDF01007772    JAV06312.1    GFDF01007760    JAV06324.1    LNIX01000039    OXA39263.1    LNIX01000003    OXA57597.1    GEHC01000921    JAV46724.1    GEHC01000956    JAV46689.1   

Proteomes

UP000283053    UP000218220    UP000005204    UP000037510    UP000069940    UP000249989    + More
UP000198287    UP000075900   

PRIDE

V9GZQ1    H9JNE5   

Pfam

PF03564   DUF1759        + More
PF05380   Peptidase_A17
PF00665   rve
PF18701   DUF5641
PF00628   PHD
PF00078   RVT_1
PF01565   FAD_binding_4
PF17921   Integrase_H2C2
PF09129   Chol_subst-bind
PF05585   DUF1758

Interpro

IPR040676   DUF5641        + More
IPR036397   RNaseH_sf       
IPR005312   DUF1759       
IPR001584   Integrase_cat-core       
IPR008042   Retrotrans_Pao       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR001841   Znf_RING       
IPR019786   Zinc_finger_PHD-type_CS       
IPR000477   RT_dom       
IPR019787   Znf_PHD-finger       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR011011   Znf_FYVE_PHD       
IPR006094   Oxid_FAD_bind_N       
IPR016166   FAD-bd_PCMH       
IPR016164   FAD-linked_Oxase-like_C       
IPR041588   Integrase_H2C2       
IPR016170   Cytok_DH_C_sf       
IPR015213   Cholesterol_OX_subst-bd       
IPR036318   FAD-bd_PCMH-like_sf       
IPR016169   FAD-bd_PCMH_sub2       
IPR016167   FAD-bd_PCMH_sub1       
IPR008737   Peptidase_asp_put       

SUPFAM

SSF53098   SSF53098        + More
SSF57903   SSF57903       
SSF56176   SSF56176       
SSF55103   SSF55103       

Gene 3D

3.30.420.10     3.30.40.10     3.30.43.10     3.30.465.10     3.40.462.10    

ProteinModelPortal

Q2MGA5   A0A2H1W036   V9GZQ1   A0A3S2N5J7   A0A2A4IX21   H9JNE5   + More
A0A0L7KW57   A0A0L7L0N3   A0A0A9ZAM6   A0A0A9ZJ56   A0A0A9ZFI6   A0A0L7KYG1   A0A0A9ZGM2   A0A0A9ZDG1   A0A182H5B8   A0A182GC70   A0A226DH22   A0A182HDB0   A0A226E2P7   A0A226EEI4   A0A226EDU9   A0A182RWX5   Q76C94   Q76C95   O02006   A0A182HEF9   A0A2M4CKZ8   A0A1L8DIN5   A0A1L8DJ10   A0A226D278   A0A226EKF8   A0A1W7R6D5   A0A1W7R699  

KEGG

101747137    no KO assigned | (RefSeq) uncharacterized LOC101747137

GO

GO:0015074   GO:0003676   GO:0008270   GO:0003964   GO:0046872   GO:0071949   GO:0016491   GO:0071564   GO:0016021  

Length:

761

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00602

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00016

outside

1  -  761

 

 

Pi

177.486752

Theta

138.69884

Tajima's D

0.631989

CLR

253.2628

CSRT

0.551372431378431

Interpretation

Uncertain