Gene
KWMTBOMO10267
Pre Gene Modal
BGIBMGA007273
Annotation
Voltage-dependent_calcium_channel_gamma-5_subunit_[Papilio_machaon]
Location in the cell
PlasmaMembrane Reliability : 4.821
Sequence
CDS
ATGTGGGGCGGCGGTGCGCAGTGCGTGCACGCGTCGTTGCCTAGGGGTGCGCGAGCTCAACCCGCGCCTACACTCAGCGGCGCGATCGCCAGCCGCCGCCCGCCCAGACCCACACCCCCTTCTCCAACACTCGTCGCCCAGATAGATTCCTCAGTGGCCTGCCTCTGGCTACTCACTCCTCTCTCGGCTGGGACTGCGGTTGTAGCGGTCCTCGTTGCGGTATCGACGAACAACTGGCTCCACACACAAGAAAATATGCTCAACCCTTCCTTCAACGGAACAGGCAAATACGATTTGGTTGCGAAACAAACAGTTTCTGGACTCTGGCGACTTTGCCATACTGACCCTGGGAGTACAATATTCCGTTGTAAGGATATCCCGTACTTCCCATTATCTCAGTACATGCCTGACACCAGCGATTCGACAAATGCAATTCCATATGTGGTGACCCGTTCGGCTGCTCCTTTGTTGCTTGCGGTATTCACGCAAGCTGTGGGCGCGTTGTGTTGCGTCCTCGGGCACTGTGTCAAGGGACGTAGGCTTTGCACCTTCATCGCCGGAGTTATGTTCATCATTTCAGGTTTAATAATGTTGACCGGAATAATTATGTACATATCGGTTTTTAAATCGCAATTAGGACACAAACTACGATACATGACATTCTTCGATGCACCCAGAATGTCTTACAGCTACGGGTATTCGTTCGGGCTATACATTGGCGGTTTTGTCGCAGCAGAGTTGGCCGGGACATCAGCGATATTTTTGTTTCTTCAGTGGTATCAAAAAGACTGGGTAACAGAGCTCACGGAAAAGGCAAAGGCTGATTGTCGTGCTTGGGATAGAGAGTATGCATTCTCAGAATTCAGAGAACGTGACTCTACAATTTTAGAAAGACGCATGATGAAGAGAGACACGTATCCTCCGTCGGGTTCGTCAGCGGCTACACCGCGTGAAGGCCGCCGCTTCATATTTGATGGCGACGAGCTCCCTCACTGTTCTATACATAAGAATAGAAGAACTAATTTAAGTTCAGCATCGCTGAAGGACTTATCGTCGTCTACCTTATACGGGTTCCCTGCAGCACCACGACCGACAGCCTGCGATAATTATTTCGAAGAATTTAAAGAAGTACCGCAGAGTGCCAATACTTTAAGTGGGTTGCGAAGCGTATCGATATTCCAATCTCAAGCGTCTGTAGCCAGCGGGAGATTTTTGGATACATCTGCTGTAGAGCCACCACCATCTCAGGAGGAAGAACTAGTGACTTTTGGAGTTGGCGCAAGAAATAACAATGGCTTGGACGAACAACAGGCTATGCGTCTTGATCGTGGCGTACACGACCGTGCTGTTGGCACCGATCCCTATCGTAGGACAACGCCCAAATATCAATGGTGTGCATACACCCTGATGTTGATGGCTATATTTTGGGTAACGGAATGTATCCCACTACCGGTGACATCATTTTTGCCGATTCTTATCTTTCCTATGTCTGGCGTCATGGATACTGCTAAAACGTGCCGCTGCTATATGAATGACACTATTATAATGTTTCTTGGGAGCATGATGCTGGCTGCTGCTGTCGAGCAATCTGGACTTCATAAACGATTGGCACTTTGGACCATAAGAGCTATTGGCTTATCGCATTACAAATTGTTATTTGCAATTTCATTCATTACTATGTTCGTCTCGATGTGGATAACCAACACAGCTGCTACAACGATGATGGTCCCAATCAATAGTGCCTTATTAAAAGTTTTTGAAGACGTAAGCATAATTAATTACAAAATAACATCAACATGA
Protein
MWGGGAQCVHASLPRGARAQPAPTLSGAIASRRPPRPTPPSPTLVAQIDSSVACLWLLTPLSAGTAVVAVLVAVSTNNWLHTQENMLNPSFNGTGKYDLVAKQTVSGLWRLCHTDPGSTIFRCKDIPYFPLSQYMPDTSDSTNAIPYVVTRSAAPLLLAVFTQAVGALCCVLGHCVKGRRLCTFIAGVMFIISGLIMLTGIIMYISVFKSQLGHKLRYMTFFDAPRMSYSYGYSFGLYIGGFVAAELAGTSAIFLFLQWYQKDWVTELTEKAKADCRAWDREYAFSEFRERDSTILERRMMKRDTYPPSGSSAATPREGRRFIFDGDELPHCSIHKNRRTNLSSASLKDLSSSTLYGFPAAPRPTACDNYFEEFKEVPQSANTLSGLRSVSIFQSQASVASGRFLDTSAVEPPPSQEEELVTFGVGARNNNGLDEQQAMRLDRGVHDRAVGTDPYRRTTPKYQWCAYTLMLMAIFWVTECIPLPVTSFLPILIFPMSGVMDTAKTCRCYMNDTIIMFLGSMMLAAAVEQSGLHKRLALWTIRAIGLSHYKLLFAISFITMFVSMWITNTAATTMMVPINSALLKVFEDVSIINYKITST
Summary
Uniprot
EMBL
Proteomes
PRIDE
ProteinModelPortal
PDB
6O9G
E-value=8.33284e-11,
Score=163
Ontologies
GO
Topology
Length:
599
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
156.07315
Exp number, first 60 AAs:
7.77622
Total prob of N-in:
0.91170
inside
1 - 51
TMhelix
52 - 74
outside
75 - 153
TMhelix
154 - 176
inside
177 - 182
TMhelix
183 - 205
outside
206 - 234
TMhelix
235 - 257
inside
258 - 470
TMhelix
471 - 493
outside
494 - 512
TMhelix
513 - 532
inside
533 - 544
TMhelix
545 - 567
outside
568 - 599
Population Genetic Test Statistics
Pi
203.32807
Theta
179.099696
Tajima's D
0.086626
CLR
0.030013
CSRT
0.394530273486326
Interpretation
Uncertain
