SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10265
Pre Gene Modal
BGIBMGA007284
Annotation
hypothetical_protein_RR48_12930_[Papilio_machaon]
Location in the cell
PlasmaMembrane   Reliability : 1.582
 

Sequence

CDS
ATGGCTGTTGAACCTAAGGCAAAGGTTTTCCGGAGCCATCCATGGCCGTCTAAGGTGTATGTTGGTGCGCTAGGCGTTGGTGTTGGTTGTTCGTTTGGTTACATGTTCCCTTTTATGTATACACCTGCTTACTTTTGTCACTACACTGGGAAAGTTCCAGTTAAAAAAATGGCTAAATATTCTATAGGTAGTGTTATTATCAGTCTGATCGTGTTATGGTTGGCATTGGTCTATTGGGCACCGTATTTATGGGATCCCACTGACAAGGGTATAACGCCTGTAGCCACGGCCACTGTTTCTCCATCTGGAAATGGAACTACCCACGCAGGAGCAGGACCAGCAGCAAAGCCGACACCACCTCCTCCGGGACCAGCAAAACCGCCAGCGAAGAAACCGTAA
Protein
MAVEPKAKVFRSHPWPSKVYVGALGVGVGCSFGYMFPFMYTPAYFCHYTGKVPVKKMAKYSIGSVIISLIVLWLALVYWAPYLWDPTDKGITPVATATVSPSGNGTTHAGAGPAAKPTPPPPGPAKPPAKKP

Summary

Pfam
PF00939   Na_sulph_symp
Interpro
IPR001898   SLC13A/DASS       

Ontologies

Topology

Length:
132
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
44.39921
Exp number, first 60 AAs:
22.69146
Total prob of N-in:
0.34629
POSSIBLE N-term signal
sequence
outside
1  -  19
TMhelix
20  -  42
inside
43  -  61
TMhelix
62  -  84
outside
85  -  132
 
 

Population Genetic Test Statistics

Pi
307.353359
Theta
180.973876
Tajima's D
2.246223
CLR
0
CSRT
0.916104194790261
Interpretation
Uncertain
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