Silkworm Genome Informatics Database

Gene

KWMTBOMO10264

Pre Gene Modal

BGIBMGA007284

Annotation

Protein_I'm_not_dead_yet?_partial_[Papilio_machaon]

Location

Bomo_Chr17(+):6284038-6286415 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.011

CDS

ATGGGCTGGGCTGCTTTTAGTAAAGAAAAAGGGGCACCAGAAATACCGGGCTTGAAAGACGCTACTGTTGCTGCCTTATTTGTAATTGCTTTACATATACTACCGAAAAGCTTTGGATTTGTTAAGCTCTTAATTGCTGAAAAGAGAAGTGAACTGCCACCGAACAAACCAGAATCAGCCATACTTTGGTGGCGATTTGTCGATAAAAATTTGAACTACGGCTACATGTTTCTCATTGGTAAGAACATTGTTTTACTGCGTTTTTTTTCTTATTATATAAAACTACGTTTATTTTCAAATGTATAA

Protein

MGWAAFSKEKGAPEIPGLKDATVAALFVIALHILPKSFGFVKLLIAEKRSELPPNKPESAILWWRFVDKNLNYGYMFLIGKNIVLLRFFSYYIKLRLFSNV

Uniprot

H9JCN8 A0A2A4J283 A0A2H1VD61 A0A194QT61 A0A212FAN5 A0A3S2L5W4 + More
A0A182GSH2 Q16UM0 B0WCP2 A0A1S4FNY7 A0A1Q3FKR1 A0A1Q3FKP1

Pubmed

19121390 26354079 22118469 26483478 17510324

EMBL

BABH01034612 NWSH01003522 PCG66175.1 ODYU01001889 SOQ38731.1 KQ461155 + More
KPJ08190.1 AGBW02009440 OWR50805.1 RSAL01000130 RVE46443.1 JXUM01002648 KQ560143 KXJ84196.1 CH477618 EAT38223.1 DS231889 EDS43693.1 GFDL01006979 JAV28066.1 GFDL01006917 JAV28128.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000007151 UP000283053 UP000069940 + More
UP000249989 UP000008820 UP000002320

PRIDE

H9JCN8

Pfam

PF00939   Na_sulph_symp        + More
PF03600   CitMHS
PF00086   Thyroglobulin_1

Interpro

IPR001898   SLC13A/DASS        + More
IPR004680   Cit_transptr-like_dom
IPR031312   Na/sul_symport_CS
IPR000716   Thyroglobulin_1
IPR036857   Thyroglobulin_1_sf

SUPFAM

SSF57610 SSF57610

Gene 3D

4.10.800.10

CDD

cd00191 TY

ProteinModelPortal

H9JCN8 A0A2A4J283 A0A2H1VD61 A0A194QT61 A0A212FAN5 A0A3S2L5W4 + More
A0A182GSH2 Q16UM0 B0WCP2 A0A1S4FNY7 A0A1Q3FKR1 A0A1Q3FKP1

KEGG

101745076 K14445 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 | (RefSeq

GO

GO:0006814 GO:0005215 GO:0016021 GO:0055085

Length:

101

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

37.93905

Exp number, first 60 AAs:

16.96264

Total prob of N-in:

0.31027

POSSIBLE N-term signal

sequence

outside

1 - 22

TMhelix

23 - 45

inside

46 - 70

TMhelix

71 - 93

outside

94 - 101

Pi

163.315996

Theta

127.111001

Tajima's D

0.804459

CLR

1.150407

CSRT

0.6037198140093

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics