Gene

KWMTBOMO10261

Pre Gene Modal

BGIBMGA007275

Annotation

PREDICTED:_uncharacterized_protein_LOC106119184_[Papilio_xuthus]

Location

Bomo_Chr17(-):6208484-6259087      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.881

CDS

ATGGAGACGGATAAAATGTCGACGGCCTCATCTGTAGGCGCTGAGAGACGGCCTCTCCTGCAGGCGCTGGTGATTGAGAGACGAATCCTATTTGGCTGCACAGTATTCTCAGGACTGTGCACATTTTTATGGATAACTGCCGTCTGTACTTCAAAATGGGTTCACATAGATGCAGGAAACGGTATTCCCTTACCAGGCAGAGGTGGTTACCTAATGTGGAGTGATTCTGGAGTTTGGGCGATTTGCCGATATGTGTTCCATCCTAATATTACTACGGTTAACCACACCGTGATAACTACACCCAAACCTCAAGATATTGGTAGCTTGACGGGATCGTATTCTACATTATGCACAAATTATCTCTCACAGCCAGTTATGGAGAACGGTAGACCGGCTGATCCAGCCTATGACGTGAATATAGCTAATTATGTTCGCACGATGATATCCTTCGGTATTATCAGTTTGTTCGTGATGGCGATGGGCTGTGGTTTCTCGACGTACACTTTCCGCAACCCTCGGTATATGTTCAAGCGGTTGGCCGCCGGTATCCATTTCATTAGCACATCGTGTACTTTCGTGGTGGTACAGGTGATGATGTCTTCGGTGGATCACATGAAGAAAAACTTGAAGTATGTGTACCCTGAACGAGCCACCCACAACTACCACATCAGTTTCTTTCTTGCCTGGTTCGTGGTTCTCATTAATCTCGCTGCTGCCGGCTCCTTCCTCTGGTACTCAAGGAAGAGAAAAGGCGACAAAGCAGCCACCGATGAACTCGCCATGGCCGACGAACCCACCATCATCGGGCGATGA

Protein

METDKMSTASSVGAERRPLLQALVIERRILFGCTVFSGLCTFLWITAVCTSKWVHIDAGNGIPLPGRGGYLMWSDSGVWAICRYVFHPNITTVNHTVITTPKPQDIGSLTGSYSTLCTNYLSQPVMENGRPADPAYDVNIANYVRTMISFGIISLFVMAMGCGFSTYTFRNPRYMFKRLAAGIHFISTSCTFVVVQVMMSSVDHMKKNLKYVYPERATHNYHISFFLAWFVVLINLAAAGSFLWYSRKRKGDKAATDELAMADEPTIIGR

Uniprot

A0A212FAP2   A0A194QBD7   A0A194QSA0   A0A2A4JT02   A0A3S2NWJ4   A0A1B6G9P5   + More
A0A088AJX4   A0A154P2H6   A0A1B6H8J8   A0A0L7QQW5   A0A1B6KI54   A0A2J7QGI6   A0A067QR52   A0A026WN15   A0A1B6C3M6   A0A023F684   A0A232EXG8   A0A0C9R4R0   A0A1B0CE53  

Pubmed

22118469    26354079    24845553    24508170    30249741    25474469    + More
28648823   

EMBL

AGBW02009440    OWR50802.1    KQ459232    KPJ02744.1    KQ461155    KPJ08194.1    + More
NWSH01000682    PCG74818.1    RSAL01000130    RVE46445.1    GECZ01010613    JAS59156.1    KQ434796    KZC05544.1    GECU01036669    JAS71037.1    KQ414784    KOC61017.1    GEBQ01028882    JAT11095.1    NEVH01014362    PNF27694.1    KK853462    KDR07464.1    KK107148    QOIP01000009    EZA57420.1    RLU18359.1    GEDC01029201    GEDC01017980    GEDC01000350    JAS08097.1    JAS19318.1    JAS36948.1    GBBI01001980    JAC16732.1    NNAY01001747    OXU23035.1    GBYB01002955    JAG72722.1    AJWK01008582    AJWK01008583    AJWK01008584    AJWK01008585   

Proteomes

UP000007151    UP000053268    UP000053240    UP000218220    UP000283053    UP000005203    + More
UP000076502    UP000053825    UP000235965    UP000027135    UP000053097    UP000279307    UP000215335    UP000092461   

Pfam

PF13903   Claudin_2        + More
PF00939   Na_sulph_symp

Interpro

IPR004031   PMP22/EMP/MP20/Claudin        + More
IPR031312   Na/sul_symport_CS       
IPR001898   SLC13A/DASS       

ProteinModelPortal

A0A212FAP2   A0A194QBD7   A0A194QSA0   A0A2A4JT02   A0A3S2NWJ4   A0A1B6G9P5   + More
A0A088AJX4   A0A154P2H6   A0A1B6H8J8   A0A0L7QQW5   A0A1B6KI54   A0A2J7QGI6   A0A067QR52   A0A026WN15   A0A1B6C3M6   A0A023F684   A0A232EXG8   A0A0C9R4R0   A0A1B0CE53  

KEGG

101744647    no KO assigned | (RefSeq) uncharacterized LOC101744647

GO

GO:0016021   GO:0008270   GO:0006412   GO:0005622   GO:0015935   GO:0004812   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

Length:

270

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

87.54534

Exp number, first 60 AAs:

20.63829

Total prob of N-in:

0.97679

POSSIBLE N-term signal

sequence

inside

1  -  28

TMhelix

29  -  48

outside

49  -  145

TMhelix

146  -  168

inside

169  -  179

TMhelix

180  -  202

outside

203  -  221

TMhelix

222  -  244

inside

245  -  270

 

 

Pi

184.122563

Theta

155.687961

Tajima's D

0.489623

CLR

0.733409

CSRT

0.513424328783561

Interpretation

Uncertain