SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10257
Pre Gene Modal
BGIBMGA007281
Annotation
hypothetical_protein_RR46_09944_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 4.776
 

Sequence

CDS
ATGATACCACGATGGAGGAAAACTGTATCGAGATTGTTCCTAATTCCCCAGCGGTATGTCTTGGGCATCATGGGTCTGTTGGCTGTGTGCAACGCGTACACCATGCGAGTTTGCCTCAACCTGGCCGTCACTCAAATGGTTAATACAACAAAACACGAAGACGCGCATTTTGATCCTGACGCGTGTCCTGACGACAGCGAAATACTGACCAACGGAACAGTTAGCTTGAAACCGTACGCTATATTCGATTGGTCCGAATCAACGCAAGGCCTGATACTCAGCGGGTTTTACTATGGATACGCTATAACTCATGTCCCTGGAGGATACTTGGCGGAAAAATACGGAGGGAAATGGACTTTGGGAATAGGTCTTCTGAGTACAGCTATCTTCACGCTCATGACGCCCGTAGTTGTGAAAGCTGGGGGAGCTACTTGGCTATTCATTTTGAGAGTATTACAAGGAATGGGTGAGGGTCCAACAATGCCGGCTCTGATGATAGTACTGGCTCGATGGGTTCCACCCCATGAACGATCACGGCAAGGAGCTTTGGTCTTCGGTGGAGCACAAATAGGAAATATATTCGGTTCTTTCATGTCAGGATTCTTGATGGCTGGAGATGGTGATTGGGCTAATGTGTTTTATTTCTTCGGATGCTTTGGTGTACTATGGTTCGTGGCTTGGAGTATACTTTGCTTCAGTACACCAAACACTCACCCGTATATTTCTGAAGAGGAGTTGAATTATCTTAATGAAACAGTAACCAGTGCTGATACAAAAAGCGTCAGAGACCCCGTGCCTTGGAAAGCGATTGTCAGATCAGTGCCTGTTTGGGCATTATTGTTCGCTGCTGTTGGTCACGACTGGGGCTACTACACAATGGTGACAGATTTACCGAAATACATGACAGACGTTCTTAAATTCAATATCGCTACAACTGGAACGCTAACTGCGATTCCGTATCTCGCCATGTGGATAAGCTCATTTATATTTGGATGGGCCTGTGATTTTTGCGTGAAAAAGAATTGGCATTCCATTAAGACCGGCCGGATCATTCATACGACTATAGCTGCGACGGGGCCCGCAATATGTATCATATTGGCTTCATATGCGGGCTGTGACCGTTTTGCCGCCGTCGCCTATTTCATCGCATCTATGGCTCTCATGGGAGGATTCTACAGTGGAATGAAGGTGAATGCTTTAGACTTGGCACCGAATTACGCGGGTTCCTTGACCGCCATGATCAACGGGACGTCAACAATATCGGGAATCATCACGCCGTATCTAATTGGGCTATTAACGCCAGACTCAACCCTGGTACAGTGGCGTGTCGCGTTTTGGGTTTGTTTCGCCGTTCTGGTTGGAACGAACGTCGTGTACATAATTTGGGCTGACGGGAAACGTCAGTGGTGGGATGACGTGCGTCAATACGGTTATCCTGCTGATTGGAAACACGGTCCCCTGAAAATGGCGGACGAAGACAAAGAGAAAAGTAAAAAAGCCGAAGCTAATGATTCCGGGAAGTGA
Protein
MIPRWRKTVSRLFLIPQRYVLGIMGLLAVCNAYTMRVCLNLAVTQMVNTTKHEDAHFDPDACPDDSEILTNGTVSLKPYAIFDWSESTQGLILSGFYYGYAITHVPGGYLAEKYGGKWTLGIGLLSTAIFTLMTPVVVKAGGATWLFILRVLQGMGEGPTMPALMIVLARWVPPHERSRQGALVFGGAQIGNIFGSFMSGFLMAGDGDWANVFYFFGCFGVLWFVAWSILCFSTPNTHPYISEEELNYLNETVTSADTKSVRDPVPWKAIVRSVPVWALLFAAVGHDWGYYTMVTDLPKYMTDVLKFNIATTGTLTAIPYLAMWISSFIFGWACDFCVKKNWHSIKTGRIIHTTIAATGPAICIILASYAGCDRFAAVAYFIASMALMGGFYSGMKVNALDLAPNYAGSLTAMINGTSTISGIITPYLIGLLTPDSTLVQWRVAFWVCFAVLVGTNVVYIIWADGKRQWWDDVRQYGYPADWKHGPLKMADEDKEKSKKAEANDSGK

Summary

EMBL
NWSH01000970    PCG73349.1    BABH01034602    KQ459232    KPJ02741.1    RSAL01000130    + More
RVE46449.1    KQ461155    KPJ08197.1    ODYU01004960    SOQ45356.1    AGBW02009440    OWR50799.1    NWSH01000682    PCG74815.1    AB264687    BAG30762.1    KPJ02742.1    KPJ08196.1    AGBW02009266    OWR51223.1    KPJ08198.1    RVE46451.1    BABH01034604    KPJ02739.1    PCG73347.1    PCG73348.1    BABH01034596    OWR51222.1    KPJ02740.1    KPJ08134.1    RSAL01000189    RVE44729.1    KPJ02803.1    ODYU01010612    SOQ55840.1    NWSH01003662    PCG65964.1    BABH01034647    AGBW02008878    OWR52311.1    GALX01004487    JAB63979.1    KQ971362    EFA08924.2    GEZM01088379    JAV58231.1    KYB25747.1    NEVH01020858    PNF21048.1    GEZM01058093    JAV71913.1    JTDY01000017    KOB79399.1    LJIG01022894    KRT78184.1    GGFJ01004472    MBW53613.1    GGFM01001173    MBW21924.1    GGFK01010022    MBW43343.1    GGFK01009753    MBW43074.1    GAMD01000950    JAB00641.1    GGFJ01004473    MBW53614.1    GGFL01004975    MBW69153.1    AXCN02000700    AAAB01008964    APCN01005199    KK853134    KDR10840.1    CH477223    EAT47235.1    GFDF01009257    JAV04827.1    GAPW01001089    JAC12509.1    GAPW01001090    JAC12508.1    GFDL01014561    JAV20484.1    GFDL01014832    JAV20213.1    GFDL01014539    JAV20506.1    UFQS01000047    UFQT01000047    SSW98548.1    SSX18934.1    ATLV01023802    KE525346    KFB49621.1    GDHF01020879    GDHF01009648    JAI31435.1    JAI42666.1    GAMC01021217    GAMC01021215    JAB85338.1    APGK01057054    APGK01057055    APGK01057056    APGK01057057    APGK01057058    APGK01057059    KB741277    ENN71267.1    CH963920    EDW77796.1    CH902620    EDV31721.1    OUUW01000006    SPP81431.1    JXUM01029060    KQ560841    KXJ80654.1    GBXI01005361    JAD08931.1    CH933807    EDW11515.1    GFDL01014836    JAV20209.1    DS232015    EDS31939.1    CH940649    EDW64509.1    ACPB03000198    CH379059    EAL34227.2    CH479187    EDW39857.1    GDKW01002574    JAI54021.1    KQ980713    KYN14370.1    CH916372    EDV99308.1    QOIP01000005    RLU23056.1    EAA12474.3    GBYB01006080    JAG75847.1    NNAY01000124    OXU30740.1    ENN71266.1    CM000157    EDW88140.1    KB631617    ERL84714.1   
Pfam
PF07690   MFS_1
Interpro
IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR005829   Sugar_transporter_CS       
SUPFAM
SSF103473   SSF103473       
PDB
6E9N     E-value=6.31807e-15,     Score=198

Ontologies

Topology

Length:
507
Number of predicted TMHs:
12
Exp number of AAs in TMHs:
252.98874
Exp number, first 60 AAs:
21.42269
Total prob of N-in:
0.89928
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  88
TMhelix
89  -  111
inside
112  -  117
TMhelix
118  -  137
outside
138  -  146
TMhelix
147  -  169
inside
170  -  181
TMhelix
182  -  204
outside
205  -  208
TMhelix
209  -  231
inside
232  -  269
TMhelix
270  -  292
outside
293  -  306
TMhelix
307  -  329
inside
330  -  349
TMhelix
350  -  372
outside
373  -  375
TMhelix
376  -  393
inside
394  -  405
TMhelix
406  -  428
outside
429  -  442
TMhelix
443  -  462
inside
463  -  507
 
 

Population Genetic Test Statistics

Pi
171.406642
Theta
148.996561
Tajima's D
-1.323303
CLR
0.52635
CSRT
0.0854957252137393
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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