Gene

KWMTBOMO10251

Annotation

PREDICTED:_uncharacterized_protein_LOC105841690_[Bombyx_mori]

Location

Bomo_Chr17(-):5945640-5946747      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.627 Mitochondrial   Reliability : 1.005

CDS

ATGGCCGTCAGAGTCATCCGCGGGTACCGCACGATTTCCTACGAGGCGGCTTGCGTCCTGGCCGGATCCCCGCCCTGGGACCTAGAGGCGAAAGTACTCGCGTCATTATATCGATGGCGCGAGGAAGAGCGGGCACGGGGCTCGAGGCTGGTGCAGCGGCAGATCGCGCTGCGCCGAGAGGAGCTCCGTCTGGCCTTGGTGGCGGAATGGCGGCAAAGGCTTCTGCGCCCTACCGCCGGCCTCGCAACCGTCGAGGCGATCCGGCCAGTACTCGACGACTGGCTCGGGAGAAGGCACGGATCCCTGTCGTTTAGGGTGACACAGGTGCTGTCGGGGCACGGTTGCTTCGGCAAGTACCTGTGCCGCATAGACAGGGAGCCGGACGCTCGGTGCCACCACTGCGTCCACTGCGGGGAGGACACGGCGCAACACACGCTCGCCGAGTGTGTAGCTTGGGAGGAGCAGCGCCGTGTCCTCACAAATGAAGTAGGAAGCGATCTGTCGCTGCCGGCCGTAGTGCGGAGGATGGTCGGCAGCGCAGAGTCGTGGGACGCGGTGGTGTCCTTCTGCGAGGACGTGATGTCGCAGAAGGAAACTGCAGAACGGGAGAGGGAGATCTCGACTCCCTTTCCCGGCCGCAGAAGGCGCACCGGGCGCAGGACAAGGGCGGACAATGCCCTTTTCCGCCCCCATGAATGGGTCCAGGGGCGAGGGACTTGGGAAAGCCCTCGCCCCCTATTCGATGGACCTGAGACGGAGGCGCATGCGGGTGTCGGCGCGTGCCTCTGA

Protein

MAVRVIRGYRTISYEAACVLAGSPPWDLEAKVLASLYRWREEERARGSRLVQRQIALRREELRLALVAEWRQRLLRPTAGLATVEAIRPVLDDWLGRRHGSLSFRVTQVLSGHGCFGKYLCRIDREPDARCHHCVHCGEDTAQHTLAECVAWEEQRRVLTNEVGSDLSLPAVVRRMVGSAESWDAVVSFCEDVMSQKETAEREREISTPFPGRRRRTGRRTRADNALFRPHEWVQGRGTWESPRPLFDGPETEAHAGVGACL

Cofactor

FAD

Similarity

Belongs to the GMC oxidoreductase family.

Uniprot

A0A2W1B333   A0A2W1BSQ5   Q5KTM7   Q868Q4   Q8MY27   Q8MY31   + More
Q8MY33   A0A2W1BDU5   Q8MY35   A0A0J7KCI1   A0A2H1WNZ5   A0A0J7MZM4   A0A2W1C3J5   A0A0J7N1D9   A0A0J7KJB9   A0A3S2N998   A0A0J7KS67   A0A0J7N7H9   A0A3L8DDS1   A0A2H1VYR8   O01419   A0A0J7KCQ3   A0A3L8DDV9   E2BVR6   A0A3L8D2G3   A0A3L8DIL1   A0A0J7KIW1   A0A194R5D3   A0A0J7NEG9   J9KZ24   A0A0J7KLT9   A0A0J7JZ13   A0A0J7JZF7   A0A0J7KJ07   A0A0J7KQK3   A0A0J7JYN4   A0A3L8DY91   A0A0J7KIY5   A0A0J7KP92   A0A0J7MX22   A0A0J7K4I2   A0A2S2P557   A0A0J7K840   A0A0J7KHX7   A0A0J7KJH4   A0A0J7KIA8   A0A0J7KIM6   A0A0J7KYD2   A0A0J7KFG9   A0A0J7KJG6   A0A0J7KWU5   A0A0J7KMU1   J9KV04  

Pubmed

28756777    12644555    30249741    9092665    20798317    26354079    + More

EMBL

KZ150386    PZC71062.1    KZ149950    PZC76665.1    AB126050    BAD86650.1    + More
AB090825    BAC57926.1    AB078935    BAC06462.1    AB078931    BAC06456.1    AB078930    BAC06454.1    KZ150308    PZC71477.1    AB078929    BAC06452.1    LBMM01009501    KMQ88083.1    ODYU01009945    SOQ54696.1    LBMM01012957    LBMM01012956    KMQ85900.1    KMQ85901.1    KZ149896    PZC78733.1    LBMM01012027    KMQ86470.1    LBMM01006538    KMQ90523.1    RSAL01000481    RVE41577.1    LBMM01003679    KMQ93242.1    LBMM01008861    KMQ88580.1    QOIP01000009    RLU18544.1    ODYU01005282    SOQ45985.1    D85594    BAA19776.1    LBMM01009494    KMQ88097.1    QOIP01000010    RLU18098.1    GL450953    EFN80213.1    QOIP01000031    RLU14697.1    QOIP01000007    RLU20280.1    LBMM01006725    KMQ90373.1    KQ460685    KPJ12887.1    LBMM01006110    KMQ90925.1    ABLF02006132    LBMM01005733    KMQ91252.1    LBMM01019839    KMQ83438.1    LBMM01019838    KMQ83439.1    LBMM01006662    KMQ90413.1    LBMM01004272    KMQ92618.1    LBMM01020326    KMQ83308.1    QOIP01000002    RLU25407.1    LBMM01006954    KMQ90166.1    LBMM01004697    KMQ92167.1    LBMM01014909    KMQ85000.1    LBMM01014294    KMQ85237.1    GGMR01011974    MBY24593.1    LBMM01011877    KMQ86578.1    LBMM01007088    KMQ90053.1    LBMM01006657    KMQ90417.1    LBMM01007162    KMQ89979.1    LBMM01007036    KMQ90099.1    LBMM01002052    KMQ95336.1    LBMM01008349    KMQ88951.1    LBMM01006671    KMQ90407.1    LBMM01002480    KMQ94776.1    LBMM01005216    KMQ91703.1    ABLF02004674    ABLF02004675    ABLF02004676    ABLF02011637   

Proteomes

UP000036403    UP000283053    UP000279307    UP000008237    UP000053240    UP000007819    + More

PRIDE

Q5KTM7    Q868Q4    O01419   

Pfam

PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF01553   Acyltransferase
PF07776   zf-AD
PF00096   zf-C2H2
PF00732   GMC_oxred_N
PF03372   Exo_endo_phos
PF17919   RT_RNaseH_2

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR002123   Plipid/glycerol_acylTrfase       
IPR012934   Znf_AD       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR036188   FAD/NAD-bd_sf       
IPR012132   GMC_OxRdtase       
IPR000172   GMC_OxRdtase_N       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR041577   RT_RNaseH_2       

SUPFAM

SSF56219   SSF56219        + More
SSF57667   SSF57667       
SSF51905   SSF51905       
SSF57756   SSF57756       

Gene 3D

3.60.10.10     3.50.50.60    

ProteinModelPortal

A0A2W1B333   A0A2W1BSQ5   Q5KTM7   Q868Q4   Q8MY27   Q8MY31   + More
Q8MY33   A0A2W1BDU5   Q8MY35   A0A0J7KCI1   A0A2H1WNZ5   A0A0J7MZM4   A0A2W1C3J5   A0A0J7N1D9   A0A0J7KJB9   A0A3S2N998   A0A0J7KS67   A0A0J7N7H9   A0A3L8DDS1   A0A2H1VYR8   O01419   A0A0J7KCQ3   A0A3L8DDV9   E2BVR6   A0A3L8D2G3   A0A3L8DIL1   A0A0J7KIW1   A0A194R5D3   A0A0J7NEG9   J9KZ24   A0A0J7KLT9   A0A0J7JZ13   A0A0J7JZF7   A0A0J7KJ07   A0A0J7KQK3   A0A0J7JYN4   A0A3L8DY91   A0A0J7KIY5   A0A0J7KP92   A0A0J7MX22   A0A0J7K4I2   A0A2S2P557   A0A0J7K840   A0A0J7KHX7   A0A0J7KJH4   A0A0J7KIA8   A0A0J7KIM6   A0A0J7KYD2   A0A0J7KFG9   A0A0J7KJG6   A0A0J7KWU5   A0A0J7KMU1   J9KV04  

KEGG

105842725    no KO assigned | (RefSeq) uncharacterized LOC105842725

GO

GO:0003964   GO:0016746   GO:0016021   GO:0050660   GO:0016614   GO:0008270   GO:0003676  

Length:

262

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01068

Exp number, first 60 AAs:

0.00916

Total prob of N-in:

0.14972

outside

1  -  262

 

 

Pi

52.296978

Theta

69.149678

Tajima's D

-0.875134

CLR

41.241366

CSRT

0.163441827908605

Interpretation

Uncertain