SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10249
Pre Gene Modal
BGIBMGA007312
Annotation
vitelline_membrane_associated_protein_P30_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.708 PlasmaMembrane   Reliability : 1.104
 

Sequence

CDS
ATGGAACTGCTCTGTAAGGTTGTGCTGTTGTGTGTGTCAGTAAAACTGATAGATTGCGTGACAGGCGATCCATTTCAAGTGAATATGGGTTATCAGCCGATACAGGGGCGAACTTCGAACACTTTCCCGGTCATGGCTCAGTTTCCGACCTACAGGAATTTCATACCAAAGGAGACAAATCAACCTTTGTTACATATCGCAAATGGACCCAACACAAATTCAAACGCTATGCCAGAGAACAGGCAAACAAGTGGCAACGAGCTGACCTTTGACGACTTTTTGGATACATGGGACGATCACTTTCTGGATGATCGTGAACAGTTTCGCGCGGCGGCTGGTCGAGATGAACAAACGTATCCATATCCAAACCCACCTGCATACGGCTACCCGTCTGGACATAATTATGGACCTTCGAAGCCGACAGCCTATACACATCCAGCGAATTCAGCCACACCGAAAATCTCTTTATTGAAGCCAGACCTTACAGAACTAGTAAGACCTGTTACCTCAAAAGTGATAAGCAAAGTGAACGGCTTGCTTGGTTTTATATTGGCATTATTATCAGGAACCGTTCCACAAGGTCTCCAATTACAAGGGATGAAAGATTTGCTCATAAACGGCGTCCTACAACCCTTGTTGGCTGCGAAGATTGGTATAAAATCTTTGATTGCAAAATTAATAGTTCCAGTTATAGCTTTGATATTGATTAACGTGGAAGTACTCGTCACTGTTTGGTGGTTGTGGGAGGAATGTCCACAGAGTCCACCACCCGCTCAAGAGACCCAAACTAAACCTCCTCAGTATAACTCATATAGATAG
Protein
MELLCKVVLLCVSVKLIDCVTGDPFQVNMGYQPIQGRTSNTFPVMAQFPTYRNFIPKETNQPLLHIANGPNTNSNAMPENRQTSGNELTFDDFLDTWDDHFLDDREQFRAAAGRDEQTYPYPNPPAYGYPSGHNYGPSKPTAYTHPANSATPKISLLKPDLTELVRPVTSKVISKVNGLLGFILALLSGTVPQGLQLQGMKDLLINGVLQPLLAAKIGIKSLIAKLIVPVIALILINVEVLVTVWWLWEECPQSPPPAQETQTKPPQYNSYR

Summary

Ontologies

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.942939
 
 
Length:
272
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
30.8703
Exp number, first 60 AAs:
0.02647
Total prob of N-in:
0.52758
inside
1  -  225
TMhelix
226  -  248
outside
249  -  272
 
 

Population Genetic Test Statistics

Pi
49.586356
Theta
52.175891
Tajima's D
-0.261765
CLR
1.859821
CSRT
0.294435278236088
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号