SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10243  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007315
Annotation
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_7-like_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.509 Nuclear   Reliability : 1.917
 

Sequence

CDS
ATGAATCACACGCCTGCACCTGACAGGCAGCAGCACGACTCCAATGTTAACCAGGTCGTGGAGATGGAGACTCAGGACGTTGAAACAATTACCACTGAAAAAACCTGGAATGAAGAAATGATGAAGGGTCCTAATGGTGAGGTTGTCATGGCTGATGTTATGAAGACACAGGAGACTGCCTCAGCTGAGATGCCCCTCGCCTGTCTTGACGCTGAAATGGAAGACGACGAAGCGCGTTCAGAGGCAACGTTCCGATTCACGGTCCACAACTTTAAGAATTTGAAAGACTCGATGCTGTCGCCGCCGTGCTACGTGCGCAATCTGCCGTGGAAGATAATGGTTATGCCGCGGCAAGCGCCTTCGCCCGATCGGCAACAGCAAAAGTCTCTGGGCTTCTTCCTACAGTGCAACGGGGAAAGTGAATCATCCAGCTGGTCTTGTTATGCGATGGCGGAACTGAGACTCATATCCCACAAGCCGGACACCGAACCTTTCCTAAGGAAAATTCAACATTTATTTTACAGCAAAGAAAACGACTGGGGCTTTTCTCACTTCATGACGTGGAACGACGTGTTAGACCCCGAGAAGGGCTACATTAAAGACGACGCGATCACTCTGGAAGTTCACGTCACCGCCGAAGCACCCCACGGCGTATCTTGGGATTCTAAGAAGCATACAGGATATGTTGGTCTGAAGAATCAAGGTGCAACTTGTTATATGAACTCGTTACTTCAAACACTTTATTTCACGAATCAACTCCGCAAAGCTGTGTACAAGATGCCTACAGAATCGGACGATAGTACTAGATCGGTGGCTTTGGCTTTGCAAAGAGTATTCTACGAGTTACAGTTCTGTGATAAACCAGTTGGTACAAAGAAGTTGACCAAGAGCTTTGGTTGGGAAACCCTTGATTCTTTCATGCAACACGACGTACAAGAGTTCCTTAGGGTTTTATTGGATAAATTAGAAAGTAAAATGAAGGGCACATGCGTGGAGGGCACGGTTCCTCGACTGTTCGAGGGCAAGATGACATCATACATTAAGTGTAAGAACGTTAACGTTTCAAGTACCCGAGTGGAAACATTCTACGATATCCAACTCAATATAAAAGGGAAGAAAAATATCTACGAATCGTTCAAAGATTACATAAGCACAGAAACGCTAGACGGCGAGAATAAGTACGACGCTGGCGAGCACGGTCTCCAGGAAGCCGAGAAAGGCGTCATATTTGCCACGTTCCCGCCCGTGTTACATTTACACTTGATGAGATTCCAATACGATCCCATTACCGACAGTTCGGTCAAGTTTAATGACAGATTTGAATTCTACGAACGTATCAATTTAGATGCATATCTACAGGAGAAACCAGAAACACCGGCTGACTACACCCTCCATGCGGTATTAGTTCACTCGGGAGACAACCACGGGGGGCATTATGTGGTCTTTATCAATCCGAAAGGTGACGGAAAGTGGTGTAAGTTCGACGACGACGTGGTGTCCCGGTGCACGAAACAGGAGGCCATCGAATACAACTACGGCGGTCACGACGAGGACATGACGTTGACCGTTCGCCACTGCACTAACGCCTATATGTTGGTTTATATCAGGGATTCACAGTTGAAGACTGTTCTACAAGAAGTAACACAAGCAGACATACCTACTGAGTTGAGTGAGAGATTAGCTGAAGAGAAGAGAATCGAAACCATTCGTCGCAAAGAGCGGAACGAAGCCCACCTGTATATGAACGTGAATGTAGTATTGGAGGAAGCTTTCGACGGTCATCAAGGGAACGATCTGTACGACCCGGAGCGCGCGCACTACCGCGTGTTCCGCGTCAGGAAGCAGGCCACCGTCTCTGAACTCATGGAGATATTGTCAGAGAACTTTAAGTATCCACTGCAGCAGCTCCGACCCTGGCCATTTAGCGCACGCTCTAATCAGACATGCAGACCGACCTGCCTAGACATTTTTAACGATCAACTCAAGACTGTAGCTGACGTTTCTGAGAACATGAACCCATGGAACATATTCCTCGAGATGCTGCCTCCAGATTCTGGTCTCACATCATTGCCTTGGTTCGATAAGAAGAACGACGTGGTCCTGTTTTTTAAGTATTATGATCCTAAACAGAAGCGCATACACTACTGCGGACACCATTATTTGCCCATCGCAAGCAAACCTGCCGATCTTCTACCTATACTCAATCAACGTGCAGGATTCCCACCAGACACTCCACTAGTTCTGTATGAAGAAATCAAACCAGACTTTGTTGAAAAAATCAGTAATTACAACGAACCTCTAGAAAAGGTATTGGACGAGCTGATGGACGGCGACATCATTGTGTTCGAACGTGCCGACAACCGACACGACGAGCTGGAGCTGCCCACCTGCCAGGACTACTTCAAGTACATCTTCTACAAGGTCGAGGTGCAGTTCGTCGATAAAACGGTGCCCAATGATCCGGGATTCACAATGGAGCTATCGATGCAAATGCGTTATGATCAGATGGCGCGGGCGGTCGGCCAGAGGCTCAACGTGGACCCTTACTTAATACAGTTCTTTAAGTGTCAAAACTACAAGGACACCCCAGGACTACCTTTGAGATACTCATACGACGGAATACTTAAGGACTTATTAGTGTACTGCAAACCAAAATGCCCTAAGAAATTATTCTATCAGATATTATCTATTAAAGTAAACGAATTGGACAACAAGAAGCAATTCAAATGTCTATGGGTTGGTCCAAATTACAAAGAGGATAAAGAATTAATTTTGTATCCAAATAAAGGTGGTAAAGTGTCGGACATTTTAGAAGAGGCAGCTAAAGTAGTCGAGATGTCAACCGAGGGCTCAGGCAGGCTAAGGATCGTGGAGGTGTCGTGTCACAAAGTGCTACCGGGTCCGGACCCCGAGCTCACACTCGACCAGGTCACCATATCGCCGCCCAGACTCTACAGAATAGAGGAGATACCTAGAGACGAACTGAATTTACAAGAGGATGAGATGCTGGTTCCGTGTGCGCATTTCTACAAGCAAGTATACGCGACGTTCGGAATTCCGTTTTACGCGCGTTTCAAACACAACGAACCGTTCGAAGCTGTCAAAGATCGCCTACAGAAGAAACTCGACATACCCGACAAAGAATGGGAAAAGTACAACTTTGCTGTAGTGACAAACGGCAGACCTAATTACATAAGCGAAGGAGCGACAGTGAATATCAACGATTTCAGACTAAGTAGTAATACGAATCTGTCGCACCCAGACGCAACGGCGCGGCCCTGGTTCGGGCTCGAGCACATCAACAAGACGCCGAAGCGATCCCGCGTCAACTACTTGGAGAAGGCCATCAAAATATACAACTGA
Protein
MNHTPAPDRQQHDSNVNQVVEMETQDVETITTEKTWNEEMMKGPNGEVVMADVMKTQETASAEMPLACLDAEMEDDEARSEATFRFTVHNFKNLKDSMLSPPCYVRNLPWKIMVMPRQAPSPDRQQQKSLGFFLQCNGESESSSWSCYAMAELRLISHKPDTEPFLRKIQHLFYSKENDWGFSHFMTWNDVLDPEKGYIKDDAITLEVHVTAEAPHGVSWDSKKHTGYVGLKNQGATCYMNSLLQTLYFTNQLRKAVYKMPTESDDSTRSVALALQRVFYELQFCDKPVGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKLESKMKGTCVEGTVPRLFEGKMTSYIKCKNVNVSSTRVETFYDIQLNIKGKKNIYESFKDYISTETLDGENKYDAGEHGLQEAEKGVIFATFPPVLHLHLMRFQYDPITDSSVKFNDRFEFYERINLDAYLQEKPETPADYTLHAVLVHSGDNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGHDEDMTLTVRHCTNAYMLVYIRDSQLKTVLQEVTQADIPTELSERLAEEKRIETIRRKERNEAHLYMNVNVVLEEAFDGHQGNDLYDPERAHYRVFRVRKQATVSELMEILSENFKYPLQQLRPWPFSARSNQTCRPTCLDIFNDQLKTVADVSENMNPWNIFLEMLPPDSGLTSLPWFDKKNDVVLFFKYYDPKQKRIHYCGHHYLPIASKPADLLPILNQRAGFPPDTPLVLYEEIKPDFVEKISNYNEPLEKVLDELMDGDIIVFERADNRHDELELPTCQDYFKYIFYKVEVQFVDKTVPNDPGFTMELSMQMRYDQMARAVGQRLNVDPYLIQFFKCQNYKDTPGLPLRYSYDGILKDLLVYCKPKCPKKLFYQILSIKVNELDNKKQFKCLWVGPNYKEDKELILYPNKGGKVSDILEEAAKVVEMSTEGSGRLRIVEVSCHKVLPGPDPELTLDQVTISPPRLYRIEEIPRDELNLQEDEMLVPCAHFYKQVYATFGIPFYARFKHNEPFEAVKDRLQKKLDIPDKEWEKYNFAVVTNGRPNYISEGATVNINDFRLSSNTNLSHPDATARPWFGLEHINKTPKRSRVNYLEKAIKIYN

Summary

Similarity
Belongs to the peptidase C19 family.
EMBL
BABH01041594    BABH01041595    GDQN01009199    JAT81855.1    NWSH01000075    PCG79910.1    + More
PCG79909.1    ODYU01008918    SOQ52915.1    GDQN01000950    JAT90104.1    PCG79911.1    PCG79913.1    PCG79912.1    PCG79914.1    KQ459232    KPJ02726.1    AGBW02009963    OWR49471.1    NEVH01024423    PNF17329.1    GEZM01006600    JAV95692.1    KK852421    KDR24281.1    KQ971363    EFA07762.1    QOIP01000009    RLU18475.1    KQ982130    KYQ59748.1    ADTU01007519    ADTU01007520    ADTU01007521    ADTU01007522    KQ980903    KYN11665.1    LJIG01016292    KRT81039.1    GL887695    EGI70458.1    KQ977185    KYN05049.1    GL448530    EFN84413.1    KQ981905    KYN33399.1    KK107231    EZA55055.1    GBYB01009842    JAG79609.1    JR037624    AEY57878.1    KQ435012    KZC13774.1    PYGN01002425    PSN30510.1    GEBQ01001431    JAT38546.1    KQ976432    KYM87470.1    DS235392    EEB15528.1    GBYB01001636    JAG71403.1    GBGD01000230    JAC88659.1    GDHC01004633    JAQ13996.1    QCYY01001217    ROT79625.1    APGK01039902    APGK01039903    APGK01039904    KB740975    ENN76456.1    GBBI01002923    JAC15789.1    GDHC01018785    JAP99843.1    GFTR01008569    JAW07857.1    GDHC01019830    JAP98798.1    JH431789    GANP01010425    JAB74043.1    GFAA01001898    JAU01537.1    GGLE01002971    MBY07097.1    GFPF01013075    MAA24221.1    GFWV01020929    MAA45657.1    KB632186    ERL89742.1    GBBM01003510    JAC31908.1    GEDV01009033    JAP79524.1    GFAC01004785    JAT94403.1    GFDF01004459    JAV09625.1    GEDV01009032    JAP79525.1    MF680835    ATB19369.1    KK118215    KFM72468.1    NCKU01005814    RWS04141.1    IAAA01008906    LAA01156.1    IAAA01008907    LAA01158.1    NEDP02003741    OWF47975.1    RQTK01000653    RUS76556.1    IACF01003031    LAB68662.1    JH818502    EKC19292.1    CAEY01001959    GBRD01005931    GBRD01005930    GBRD01001389    JAG64432.1    GDIQ01193001    JAK58724.1    GDIQ01222984    GDIQ01139110    GDIQ01094828    GDIQ01031460    JAL12616.1    GDIQ01196596    JAK55129.1    GDIQ01136614    JAL15112.1    GDIQ01077477    JAN17260.1    GDIQ01058540    JAN36197.1    GDIQ01174894    JAK76831.1    GDIQ01231079    JAK20646.1    GL732610    EFX71348.1    GDIP01050837    JAM52878.1    GBRD01008013    GBRD01001394    GBRD01001393    GBRD01001392    GBRD01001391    GBRD01001390    JAG64427.1    GDIQ01005867    JAN88870.1    GDIQ01210334    JAK41391.1    GDIQ01094829    GDIQ01049455    JAN45282.1    GDIQ01193002    JAK58723.1    GDIQ01152014    JAK99711.1    GDIQ01092677    JAL59049.1    KB203566    ESO84027.1    GDIQ01092675    JAL59051.1    MUZQ01000332    OWK52645.1    AKHW03004154    KYO30488.1    KZ506306    PKU40254.1    AMQN01014839    KB311344    ELT89456.1    AGTO01020842    KL888978    KGL76312.1    AADN05000376   
Pfam
PF00443   UCH        + More
PF12436   USP7_ICP0_bdg
PF14533   USP7_C2
PF00917   MATH
PF00160   Pro_isomerase
Interpro
IPR018200   USP_CS        + More
IPR038765   Papain-like_cys_pep_sf       
IPR001394   Peptidase_C19_UCH       
IPR002083   MATH/TRAF_dom       
IPR028889   USP_dom       
IPR008974   TRAF-like       
IPR029346   USP_C       
IPR024729   USP7_ICP0-binding_dom       
IPR000300   IPPc       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR002130   Cyclophilin-type_PPIase_dom       
IPR029000   Cyclophilin-like_dom_sf       
SUPFAM
SSF49599   SSF49599        + More
SSF54001   SSF54001       
SSF56219   SSF56219       
SSF50891   SSF50891       
Gene 3D
PDB
5FWI     E-value=0,     Score=2318

Ontologies

Topology

Length:
1120
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0037
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00009
outside
1  -  1120
 
 

Population Genetic Test Statistics

Pi
250.707418
Theta
186.648595
Tajima's D
1.011323
CLR
0.235401
CSRT
0.668366581670916
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27102218 HTGYVGIK 100.00 2e-09
31250652 GPNGEVVMADVMKTQETASAEMPWCK 100.00 2e-09
31250652 ISNYNEPLEKEDEMLVPCAHFYK 100.00 2e-09
31250652 IETEDEMLVPCAHFYK 95.83 2e-09
31250652 GPNGEVVMADVMKTQETASAEMPTCR 100.00 4e-09
28556443 FQYDPITDSSVK 100.00 4e-07
31250652 YGEAQVQIWR 100.00 5e-05
26822097 KIDIPDKEWEK 100.00 0.004
25044914 QVVTNSSIIK 100.00 0.004
31250652 TQETASAEMPYNFAVVTNGR 100.00 0.006
27102218 TVIQEVTQADIPTEISER 100.00 0.024
28467696 FKGYEWAIGSSDYK 100.00 0.024
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