SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10231
Pre Gene Modal
BGIBMGA000180
Annotation
PREDICTED:_serine/threonine-protein_kinase/endoribonuclease_IRE1_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.05 Nuclear   Reliability : 1.072 PlasmaMembrane   Reliability : 1.151
 

Sequence

CDS
ATGAAGTTTTTATTATTGATACTATTTCTGCTCGGTTCCTCCGGCTTCGGAACCGTTGTTGATGAAGAGGGAAAGGAAAGCACAGAAATATCCCGTGCTTTGGATGACCGGCCGCTTCTGTTTGCCACGTTAGGAGGCGGTATGGTTGCTGTTGATCCTGTGTCTGGAGACATTATTTGGAAATTAAAAGACGAGCCCGTTGTCAAAGTTCCGAGCCAAGACGCGAACTTGATGCCGCAGTTCCTCCCGGATCCGAGGCATGGATTCCTATACACGTACGGCCCGAGGGGCGACCAGCAAATGTTGAAGAAGCTCCCGTTTACAATACCGGAGCTGGTGGCAAACGCGCCCTGCCGATCTACAGACGGTATTTTGTACACCGGAAAGAAAAGCGATACTTGGTTCATGATTGATCCATTAACCGGCTTTCGTGAGCACGTTTCAGGTTTTGACAAATCGAAAATATTCAAAAGCGACGACGAGAACACTTGCAACTCCGAGAAGAAGAAAGGTATTTACGTGGCGCGTACTGAATACAACATCCTGATGCACGATTCGAAGAATGTAAATCATAAATGGAATGTTACGTTCTTTGATTACACGTCGCTAGCTATGGGCAAGGACATGTTGAATGATTACGGTACAATACATTTCACATCGACGTCGAACGGTCGCGTCATGTCTTTCGACCGGAAGACCGGCGACCTCGTCTGGTCCCACAACTTTGGGACTCCGGTCGTAGCTGCCTACCTCCTGGACAGAGACGGCCTTATCTCCGTCCCTTTCAACTCGATCGGTGACGACACGCTCGATCATATCATGGAGGACGCTAAAACCCTTTCGAACGGGAAAGGACTCAAAAATTCGAATATCGAATTGTACCCGACTTTATACGTCGGTGAGCATAACCACGGTCTATACGCGCTATCGTCGTTAGTCGATAAAAACACGATAACTATATCGACGGGTCATCAGCCCTTGCTCATCGAAGGCCCCTCGACGGAGACACTAAAGACGAACGCGCCGCGCTACGAGCCTATCAAGAACATCCACTACAAACTGAGCGACCTTAACTTGCACGTCTCGGCGCCGTATCTCCTTCTCGGCCACTACAAAGTTCCGGAACTGACGACCTCCTGGATACCCCATTTGCCTAACTCGAACGTTTTGAACCTGAGAGATCCACAAATCGATTCAATAAAACTAATCAACGGAGCAGTACAAGCTCAGACGGAGAATGACGTTGAGAACGAAACGAATTTGAAGTCCAATTCGGTATCAGTTTCGGTTCAGACTGAGGATTTGTTCGAGGGTTTGTCGTTCAGGCCCGATCTGTGGTACAAGCAGGCCCACGTTTGGCTCCACCAGCAGGAGAATAAAGTGCTGAAAGTGGCACTAATTATTCTCGTCGGTTTGGTCATCGCCATGTTCTGGTACTTAAGGCTGCAGGCTCGTGAGTTCCAACAACTATCGCAAGGCGGTTCCCGAAGCTCCACCTCATCTACGTCGTCCCAGGGCGAAGTTACCGGTCAGCTCATGGAAATAGGAGAGGGTGAAATGAAGATCGGAAAGATTACATTCCAGACAGATCAGGTGCTGGGAAAAGGTTGCGAAGGCACCTTCGTTTACAGAGGGACTTTCGATAAACGCGACGTGGCAGTAAAACGATTGCTCCCTGAGTGTTTCACGTTCGCCGACCGCGAGGTGGCGCTGCTGCGGGAGTCGGACGCGCACGCACACGTCGTGCGCTACTACTGTACTGAACGCGATAAGCAGTTCAGGTACATTGCACTAGAGCTATGTTCAGCGACATTGCAGGACTATGTTGAGAAGAAGTTGAACTTCGAGTGCAAGATTGATTCGGTCGAAATACTGAGGCAGGCCACTATGGGCTTATCGCACTTACACTCTATGGATATAGTACATAGGGATGTGAAGCCGCACAACGTTTTGCTGTCGATGCCGAGTGGGACCGGCGAGGTGCGCGCCATGATATCGGACTTCGGCCTGTCCAAGAAGCTGAACATAGGGCGGGTCAGCTTCTCGAGGCGCTCTGGGGTCACCGGCACCGACGGCTGGATAGCGCCGGAGATGATCAACGGCGAACGGACTACGACATCGATCGATATATTTTCGTTGGGCTGCGTGTTCTATTACGTATTGTCAAGAGGACAACATCCATTCGGTGATGTTTTGCGGCGTCAAGCGAACATACTCACCGGGGACTACAATTTGGATCACCTCGACAAAATTCTGCCTGAAGAGGAATTGGTAGTGGTTAAAATATTGATCCGAGCTATGATCTCGGCCAAGCCCAGCGCACGTCCTCCCTGCGAAACGATACTGAAATACCCGATGTTCTGGTGCAAGCAAAGCATTCTGAACTTCTTGCAGGACGTCAGCGATCAAGTGGAGAGTTGTGCGTGCGGTTTTGGGGCGGAGCACACGCTGGAGCGGGGCGGCGCGCGGGTGCTGCGCGGCGACTGGCGCGCGCGCGTGTGCCGCGTGGTGGCGGGCGACCTGCGCACGCGCCGCACGTACCGCGGGGACCGCGTCGCGCACCTGCTGCGGGCCATCCGGAACAAGGTACCGACACCGACCAGACCACATAGTGGTCTTCTTCTTCCGGCTGTTTTGAAGAGTATATACTGGGTGTTAGGATACCGCTTCCGAAAATGA
Protein
MKFLLLILFLLGSSGFGTVVDEEGKESTEISRALDDRPLLFATLGGGMVAVDPVSGDIIWKLKDEPVVKVPSQDANLMPQFLPDPRHGFLYTYGPRGDQQMLKKLPFTIPELVANAPCRSTDGILYTGKKSDTWFMIDPLTGFREHVSGFDKSKIFKSDDENTCNSEKKKGIYVARTEYNILMHDSKNVNHKWNVTFFDYTSLAMGKDMLNDYGTIHFTSTSNGRVMSFDRKTGDLVWSHNFGTPVVAAYLLDRDGLISVPFNSIGDDTLDHIMEDAKTLSNGKGLKNSNIELYPTLYVGEHNHGLYALSSLVDKNTITISTGHQPLLIEGPSTETLKTNAPRYEPIKNIHYKLSDLNLHVSAPYLLLGHYKVPELTTSWIPHLPNSNVLNLRDPQIDSIKLINGAVQAQTENDVENETNLKSNSVSVSVQTEDLFEGLSFRPDLWYKQAHVWLHQQENKVLKVALIILVGLVIAMFWYLRLQAREFQQLSQGGSRSSTSSTSSQGEVTGQLMEIGEGEMKIGKITFQTDQVLGKGCEGTFVYRGTFDKRDVAVKRLLPECFTFADREVALLRESDAHAHVVRYYCTERDKQFRYIALELCSATLQDYVEKKLNFECKIDSVEILRQATMGLSHLHSMDIVHRDVKPHNVLLSMPSGTGEVRAMISDFGLSKKLNIGRVSFSRRSGVTGTDGWIAPEMINGERTTTSIDIFSLGCVFYYVLSRGQHPFGDVLRRQANILTGDYNLDHLDKILPEEELVVVKILIRAMISAKPSARPPCETILKYPMFWCKQSILNFLQDVSDQVESCACGFGAEHTLERGGARVLRGDWRARVCRVVAGDLRTRRTYRGDRVAHLLRAIRNKVPTPTRPHSGLLLPAVLKSIYWVLGYRFRK

Summary

EMBL
BABH01040313    BABH01040314    BABH01040315    BABH01040316    BABH01040317    ODYU01011405    + More
SOQ57130.1    RSAL01000200    RVE44453.1    AGBW02008437    OWR53397.1    KQ971358    EFA08613.1    GEZM01062149    GEZM01062148    GEZM01062147    JAV70010.1    KQ435714    KOX79225.1    KQ414615    KOC68783.1    KQ435010    KZC13752.1    NNAY01000124    OXU30749.1    NEVH01015826    PNF26541.1    KK853134    KDR10833.1    GBYB01003858    JAG73625.1    KZ288486    PBC25233.1    KQ760382    OAD60687.1    KQ977231    KYN04749.1    GL888194    EGI65399.1    KQ979038    KYN23486.1    UFQT01000645    SSX26054.1    UFQS01000410    UFQT01000410    SSX03691.1    SSX24056.1    KQ981653    KYN38619.1    ADTU01020633    ADTU01020634    ADTU01020635    ADTU01020636    ADTU01020637    APGK01057050    APGK01057051    KB741277    ENN71262.1    KB631617    ERL84717.1    GL438386    EFN69058.1    GAKP01012953    JAC45999.1    CH477750    EAT36621.1    JRES01000405    KNC31642.1    GDHF01024344    JAI27970.1    GBXI01016499    GBXI01007192    JAC97792.1    JAD07100.1    DS231830    EDS30737.1    CH940652    EDW59628.2    GFDL01008976    JAV26069.1    GL761553    EFZ23129.1    GANO01001406    JAB58465.1    CH954181    EDV48455.1    CH902617    EDV41729.1    CP012526    ALC47341.1    AE014297    ABW08704.1    CM000160    KRK02892.1    KX683314    ARE59261.1    GFDL01010067    JAV24978.1    CH916373    EDV94903.1    OUUW01000008    SPP83706.1    JXUM01056628    JXUM01056629    JXUM01056630    KQ561918    KXJ77167.1    SPP83707.1    JXJN01016586    JXJN01016587    GAMC01008601    JAB97954.1    CH933806    EDW16077.2    SPP83708.1    KQ976395    KYM93114.1    KQ983118    KYQ47270.1    GFDL01008972    JAV26073.1    CM000070    EAL29205.3    CCAG010014772    CH964251    EDW83365.2    DS235346    EEB15029.1    GGFJ01000991    MBW50132.1    GGFJ01000992    MBW50133.1    GGFJ01001372    MBW50513.1    ADMH02000361    ETN66834.1    GGFK01000916    MBW34237.1    GGFK01000902    MBW34223.1    CH479185    EDW38571.1    GGFK01000915    MBW34236.1    GGFM01000851    MBW21602.1    GGFM01006068    MBW26819.1    AXCN02000121    AXCM01003760    CVRI01000056    CRL01658.1    GGFM01001109    MBW21860.1    APCN01002549    CH480840    EDW49436.1    AAAB01008880    EAL40662.4    GEBQ01000680    JAT39297.1    GEDC01030193    GEDC01027232    JAS07105.1    JAS10066.1    GECU01018701    JAS89005.1   
Pfam
PF00069   Pkinase        + More
PF06479   Ribonuc_2-5A
PF00850   Hist_deacetyl
PF02148   zf-UBP
PF01011   PQQ
PF00215   OMPdecase
PF00156   Pribosyltran
Interpro
IPR000719   Prot_kinase_dom        + More
IPR038357   KEN_sf       
IPR018391   PQQ_beta_propeller_repeat       
IPR011009   Kinase-like_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR018997   PUB_domain       
IPR010513   KEN_dom       
IPR008271   Ser/Thr_kinase_AS       
IPR033523   IRE2       
IPR023801   His_deacetylse_dom       
IPR001607   Znf_UBP       
IPR000286   His_deacetylse       
IPR023696   Ureohydrolase_dom_sf       
IPR037138   His_deacetylse_dom_sf       
IPR013083   Znf_RING/FYVE/PHD       
IPR002372   PQQ_repeat       
IPR011044   Quino_amine_DH_bsu       
IPR001754   OMPdeCOase_dom       
IPR029057   PRTase-like       
IPR000836   PRibTrfase_dom       
IPR018089   OMPdecase_AS       
IPR023031   OPRT       
IPR014732   OMPdecase       
IPR011060   RibuloseP-bd_barrel       
IPR013785   Aldolase_TIM       
IPR004467   Or_phspho_trans_dom       
SUPFAM
SSF56112   SSF56112        + More
SSF50998   SSF50998       
SSF52768   SSF52768       
SSF50969   SSF50969       
SSF53271   SSF53271       
SSF51366   SSF51366       
PDB
6HV0     E-value=1.62412e-112,     Score=1042

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.996013
 
 
Length:
892
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
14.07498
Exp number, first 60 AAs:
0.57131
Total prob of N-in:
0.05248
outside
1  -  892
 
 

Population Genetic Test Statistics

Pi
178.357639
Theta
155.440467
Tajima's D
-1.95567
CLR
0.753879
CSRT
0.0168491575421229
Interpretation
Possibly Positive selection
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