Gene

KWMTBOMO10213  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005602

Annotation

PREDICTED:_myrosinase_1-like_[Bombyx_mori]

Location

Bomo_Chr17(-):5036060-5042307      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.104

CDS

ATGAAAGCTCTTGTGGTGTTTTTTTGTCTCAGTTTAGCAATGAGATACAGCACTTGCGTACCTAAGCAAAGGAGAACCTTTCCTGAAGACTTTATATTCGGCGTTTCAACAGCGTCTTATCAAATTGAAGGTGCCTGGAATTTAGACGGAAAAGGAGAAAACATTTGGGATTATCTCACCCACAATCATGTTGAAGCAATAGCAGATCTTAGTAATGGTGATATTGCTGCCGACTCATACCATAATTATTTAAGAGACGTGGAAATGTTGAGAGAATTGGGCGTTAATGCTTATCGTTTCTCGTTATCATGGTCGAGGATACTCCCAACCGGCTTTGCCAACTATATCAATAAAGCGGCAATCGATTACTACAATAATTTGATAAATGAACTTCTCAAATATAACATTAAACCGGTGGTCACTTTGTATCATTGGGACTTACCACAGAAACTTCAAGAATTAGGAGGTTTCGGAAATCCATTGATCGCGGATTGGTTCGAAGATTATGCCCGCGTAGCCTTCCAATATTTCGGCGACAGAGTAAAATTTTGGATTACTATTAATGAGCCGAAAGAGATATGCCTGGACGGATATGGAAGTACGGCTAAAGCCCCTATGTTAAATGAATCAGGGATCGGAGAGTACATTTGCGCTAAGAATCTGATCATAGCACACGCCAAAGCCTATCATGCGTACAGTAATGACTTTAAAGCCACGCAGGGAGGAGTATGTGGCATAACGTTTAGTGTCAGTTCTGCTCAACCACTTACGAGCTCTGAAGAAGATGCAATTGCACTTGAAATACACAACCAGGGTGAATGGGCTATATATTCCGATCCGATTTATTCAAAGGAAGGTGGTTTTCCCAAGGAGTTTTCTGAACGAATTGCATTAAAAAGCTTGCAGCAAGGGTACCCTAGATCTCGATTACCTGCGTACACCGAAGAAGAAAAAGACTTTGTTCGCGGTACAAGCGATTTCTTTGGTGTGAATCATTACAGCGGCTCTCTCGTGTCTGCAGTTACTTCTAACAATTTTGTAGTCCCGTCATTCAATGATGATGTAGGTGTCAGTTATTATACGCCCGAGGAATGGCCTCGATCAGTGTCTAGTTGGCTTACGCAAATGCCGAATAGCTTGAATATAACTCTTACGCGTTTGAGGGACAGATATGACAATCCTGAAATTTATATTACTGAGAACGGATGGTCGACGTATCAAGGACTAAATGACGACACTAGAGTCAATTATATGAGAGCCGCTTGGGAGAGTGCGTTGGATGCGCTTGATGCCGGAATTAATTTGAAGGGGTACATGGCCTGGAGCCTAATGGACAATTTTGAATGGAGGGAAGGATATAGTGAAAGGTTCGGTTTGTATGAAGTGGATTTCGAAGATCCGGCCCGCACTCGTACTCCAAGAAAATCCGCTTTTGTCTACAAACAACTGATTAGTACAAGAGAAGTTGATCACGACTATGATCCTGACTATCAGTCTATTATGACCATCAACGACTCGTGA

Protein

MKALVVFFCLSLAMRYSTCVPKQRRTFPEDFIFGVSTASYQIEGAWNLDGKGENIWDYLTHNHVEAIADLSNGDIAADSYHNYLRDVEMLRELGVNAYRFSLSWSRILPTGFANYINKAAIDYYNNLINELLKYNIKPVVTLYHWDLPQKLQELGGFGNPLIADWFEDYARVAFQYFGDRVKFWITINEPKEICLDGYGSTAKAPMLNESGIGEYICAKNLIIAHAKAYHAYSNDFKATQGGVCGITFSVSSAQPLTSSEEDAIALEIHNQGEWAIYSDPIYSKEGGFPKEFSERIALKSLQQGYPRSRLPAYTEEEKDFVRGTSDFFGVNHYSGSLVSAVTSNNFVVPSFNDDVGVSYYTPEEWPRSVSSWLTQMPNSLNITLTRLRDRYDNPEIYITENGWSTYQGLNDDTRVNYMRAAWESALDALDAGINLKGYMAWSLMDNFEWREGYSERFGLYEVDFEDPARTRTPRKSAFVYKQLISTREVDHDYDPDYQSIMTINDS

Similarity

Belongs to the glycosyl hydrolase 1 family.
Belongs to the histone H3 family.

Uniprot

H9J7W0   A0A194RQF8   A0A194PJU3   A0A2A4JS29   H9JMQ9   A0A2H1VWN4   + More
A0A2H1W426   A0A2A4JNT8   A0A2W1BPZ1   A0A2A4JPU6   A0A2H1WY61   A0A2H1VWZ6   A0A2A4JNV2   A0A2A4JQ50   A0A2W1BQ65   A0A2W1BA28   O61594   A0A194PRE4   A0A2A4JPN8   A0A212F3B1   A0A2H1VWQ1   A0A2H1W4S5   A0A0L7LHZ4   A0A2W1BVA2   A0A1W1EGN8   G9F9G8   A0A194R360   A0A194PMT2   G9F9G9   A0A212EPH6   A0A2H1VF65   A0A194RQP8   A0A194R3H6   A0A194R3H3   A0A3S2PE71   A0A194PPG4   A0A2A4JPS5   A0A194R365   A0A194R8P7   A0A194PU18   A0A194PMT8   A0A194PPG9   A0A194R4S7   G9F9I3   A0A212FKW0   A0A194PNR8   A0A212F3B9   A0A212FF93   A0A212FF90   A0A212EXF5   A0A212FBG8   A0A194PNS3   A0A3S2NZ22   H9JXB3   H9JLY5   G9F9H3   A0A0L7LEZ3   A0A194R400   Q5TQY8   A0A1Y9GKT0   A0A1Y9IRY8   A0A182U0B4   H9JLY4   A0A182YP84   A0A1Y9IW73   B0WNN7   A0A194PMG8   A0A212F3C5   A0A182QI13   A0A194R3Z4   A0A182LL23   A0A182HAK9   A0A182G2R0   A0A2M3ZET6   A0A182HAK7   A0A212EXF2   Q16WF2   A0A1S4G3W5   A0A0L7KVS3   A0A1Y9J100   Q16ET6   W5JN46   A0A2W1BGQ3   A0A1Q3FR87   A0A084VCJ7   A0A1J1IDZ4   A0A2M4BKN2   Q7Q5I1   A0A182J417   A0A1Y9GLV6   A0A1A9UP13   A0A1L8DR18   A0A1Y9J0B2   Q16WF4   A0A1L8DQS5   A0A1L8DQN1   A0A1B0C2P0   A0A1Y9GKS9   A0A1Y9J0G9   A0NES8  

Pubmed

19121390    26354079    28756777    11342030    15511222    27936116    + More
22118469    26227816    28680679    12364791    14747013    17210077    25244985    20966253    26483478    17510324    20920257    23761445    24438588   

EMBL

BABH01020023    BABH01020024    KQ459875    KPJ19634.1    KQ459601    KPI93701.1    + More
NWSH01000679    PCG74847.1    BABH01016738    ODYU01004903    SOQ45257.1    ODYU01006201    SOQ47841.1    NWSH01000883    PCG73725.1    KZ149936    PZC77129.1    PCG73728.1    ODYU01011923    SOQ57942.1    SOQ45256.1    PCG73727.1    PCG73724.1    PZC77128.1    KZ150738    PZC70347.1    AF052729    AAC06038.1    KPI93700.1    PCG73726.1    AGBW02010585    OWR48225.1    SOQ45255.1    ODYU01006202    SOQ47842.1    JTDY01001063    KOB74989.1    PZC77127.1    LT635663    SGZ49382.1    JN033713    AEW46866.1    KQ460779    KPJ12243.1    KQ459598    KPI94627.1    JN033714    AEW46867.1    AGBW02013459    OWR43376.1    ODYU01001971    SOQ38904.1    KPJ19635.1    KPJ12247.1    KPJ12242.1    RSAL01000077    RVE48784.1    KPI94624.1    NWSH01000819    PCG74065.1    KPJ12248.1    KPJ12246.1    KPI94630.1    KPI94632.1    KPI94629.1    KPJ12245.1    JN033728    AEW46881.1    AGBW02007954    OWR54377.1    KPI94628.1    OWR48226.1    AGBW02008847    OWR52397.1    OWR52398.1    AGBW02011758    OWR46180.1    AGBW02009344    OWR51063.1    KPI94633.1    RSAL01000019    RVE52748.1    BABH01035726    BABH01005438    JN033718    AEW46871.1    JTDY01001400    KOB73970.1    KPJ12249.1    AAAB01008960    EAL40075.2    APCN01002262    BABH01005437    DS232013    EDS31873.1    KPI94631.1    OWR48224.1    AXCN02000455    KPJ12244.1    JXUM01031354    KQ560919    KXJ80350.1    JXUM01040976    KQ561266    KXJ79155.1    GGFM01006254    MBW27005.1    JXUM01031352    KXJ80348.1    OWR46178.1    CH477568    EAT38910.1    JTDY01005139    KOB67338.1    CH478582    EAT32750.1    ADMH02000892    ETN64738.1    KZ150146    PZC72895.1    GFDL01004884    JAV30161.1    ATLV01010792    KE524614    KFB35691.1    CVRI01000047    CRK98477.1    GGFJ01004382    MBW53523.1    EAA11668.3    GFDF01005304    JAV08780.1    EAT38908.1    GFDF01005305    JAV08779.1    GFDF01005306    JAV08778.1    JXJN01024604    JXJN01024605    JXJN01024606    EAU76599.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000007151    UP000037510    + More
UP000283053    UP000007062    UP000075840    UP000075903    UP000075902    UP000076408    UP000075920    UP000002320    UP000075886    UP000075882    UP000069940    UP000249989    UP000008820    UP000076407    UP000000673    UP000030765    UP000183832    UP000075880    UP000078200    UP000092460   

PRIDE

H9J7W0    H9JMQ9    H9JXB3    H9JLY5    H9JLY4   

Pfam

PF00232   Glyco_hydro_1        + More
PF00335   Tetraspanin
PF02953   zf-Tim10_DDP
PF00125   Histone

Interpro

IPR033132   Glyco_hydro_1_N_CS        + More
IPR017853   Glycoside_hydrolase_SF       
IPR001360   Glyco_hydro_1       
IPR018499   Tetraspanin/Peripherin       
IPR018120   Glyco_hydro_1_AS       
IPR035427   Tim10-like_dom_sf       
IPR004217   Tim10-like       
IPR000164   Histone_H3/CENP-A       
IPR007125   Histone_H2A/H2B/H3       
IPR009072   Histone-fold       

SUPFAM

SSF51445   SSF51445        + More
SSF144122   SSF144122       
SSF47113   SSF47113       

Gene 3D

1.10.20.10    

ProteinModelPortal

H9J7W0   A0A194RQF8   A0A194PJU3   A0A2A4JS29   H9JMQ9   A0A2H1VWN4   + More
A0A2H1W426   A0A2A4JNT8   A0A2W1BPZ1   A0A2A4JPU6   A0A2H1WY61   A0A2H1VWZ6   A0A2A4JNV2   A0A2A4JQ50   A0A2W1BQ65   A0A2W1BA28   O61594   A0A194PRE4   A0A2A4JPN8   A0A212F3B1   A0A2H1VWQ1   A0A2H1W4S5   A0A0L7LHZ4   A0A2W1BVA2   A0A1W1EGN8   G9F9G8   A0A194R360   A0A194PMT2   G9F9G9   A0A212EPH6   A0A2H1VF65   A0A194RQP8   A0A194R3H6   A0A194R3H3   A0A3S2PE71   A0A194PPG4   A0A2A4JPS5   A0A194R365   A0A194R8P7   A0A194PU18   A0A194PMT8   A0A194PPG9   A0A194R4S7   G9F9I3   A0A212FKW0   A0A194PNR8   A0A212F3B9   A0A212FF93   A0A212FF90   A0A212EXF5   A0A212FBG8   A0A194PNS3   A0A3S2NZ22   H9JXB3   H9JLY5   G9F9H3   A0A0L7LEZ3   A0A194R400   Q5TQY8   A0A1Y9GKT0   A0A1Y9IRY8   A0A182U0B4   H9JLY4   A0A182YP84   A0A1Y9IW73   B0WNN7   A0A194PMG8   A0A212F3C5   A0A182QI13   A0A194R3Z4   A0A182LL23   A0A182HAK9   A0A182G2R0   A0A2M3ZET6   A0A182HAK7   A0A212EXF2   Q16WF2   A0A1S4G3W5   A0A0L7KVS3   A0A1Y9J100   Q16ET6   W5JN46   A0A2W1BGQ3   A0A1Q3FR87   A0A084VCJ7   A0A1J1IDZ4   A0A2M4BKN2   Q7Q5I1   A0A182J417   A0A1Y9GLV6   A0A1A9UP13   A0A1L8DR18   A0A1Y9J0B2   Q16WF4   A0A1L8DQS5   A0A1L8DQN1   A0A1B0C2P0   A0A1Y9GKS9   A0A1Y9J0G9   A0NES8  

PDB

5CG0     E-value=0,     Score=1702

KEGG

101738689    no KO assigned | (RefSeq) myrosinase 1-like

GO

GO:0005975   GO:0004553   GO:0016021   GO:0008152   GO:0016798   GO:0008422   GO:0005739   GO:0005634   GO:0046872   GO:0003677   GO:0000786   GO:0015031   GO:0046982   GO:0006614   GO:0008312   GO:0030942   GO:0005515   GO:0006221   GO:0006402   GO:0003824  

PANTHER

PTHR10353  

Subcellular location

Chromosome  
Nucleus  

SignalP

Position:   1 - 19,         Likelihood:  0.975439

 

 

Length:

506

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01608

Exp number, first 60 AAs:

0.01347

Total prob of N-in:

0.00128

outside

1  -  506

 

 

Pi

265.040844

Theta

212.758079

Tajima's D

0.605856

CLR

0.049244

CSRT

0.538973051347433

Interpretation

Uncertain