Gene

KWMTBOMO10211

Annotation

ribosomal_protein_L29_[Bombyx_mori]

Location

Bomo_Chr17(-):5025958-5027537      View in EpiBrowser

Full name

60S ribosomal protein L29      

Location in the cell

Nuclear   Reliability : 2.514

CDS

ATGGCAAAGTCAAAGAATCATACAAATCATAACCAAAACCGCAAAGCTCACAGAAATGGTATCAAAAAGCCAAGGAAGACCAGGCACGAATCCACCCTTGGCATGGATCCAAAATTTTTAAGGAATCAAAGGTTTTGCAAGAAGGGTAACCTGAAGCCAGCCAAGCAACTCGCGAGGGCGGCTGAGAGAAAAGCTACCCGAGAAGCAAAGGCCAAGAAATGA

Protein

MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATREAKAKK

Similarity

Belongs to the eukaryotic ribosomal protein eL29 family.

Uniprot

Q5UAQ9   G0ZEH9   A0A2A4JS32   Q95V37   A0A2A4AQK4   A0A194QRT8   + More
I4DJ49   E7DZ61   D1LYQ1   Q6F462   A0A1B6HMY9   A0A3L8DRF2   A0A2A3EIX0   A0A088ACQ3   A0A154PLE3   A0A151IAJ1   E2APH7   A0A151X8X8   F4W992   A0A195B509   A0A0J7KUJ8   A0A158P0Z1   A2IAE5   A0A0L7K4Q9   E2BYE2   A0A0V0G3S6   A0A2S0DSS8   R4WCL3   A0A2J7PT32   A0A069DNP0   G1K0B8   A0A2P8YJ89   Q56FK4   A0A232FG56   K7IV47   A0A2R7W9L8   A0A1W4WTQ2   A0A067QKI3   Q4GXB8   J3JTG2   Q4GXB6   A0A0P4VLI8   D1M840   Q4GXB7   A0A0K8TPR2   A0A1I8M4X7   A0A109NI18   A0A0L0BLG9   A0A1L8ECA3   A0A1L8DSJ8   A0A261Y037   A0A2P8Z1W2   A8CAG1   A0A1L8ECB1   A2I402   T1E8B0   A0A2M3YXK7   A0A2M3ZZV8   A0A2M4C576   A0A200PWF2   A0A200R257   W5JUZ9   A0A2I4DE26   A0A0A0KCX6   A0A1S3C7U0   R7UHZ6   Q9MAW5   A0A2I4F1X6  

Pubmed

14668217    26354079    22651552    30249741    20798317    21719571    + More
21347285    17437641    26227816    29190301    23691247    26334808    21736942    29403074    28648823    20075255    24845553    22516182    23537049    27129103    26369729    25315136    26108605    28876195    17760985    28552780    20920257    23761445    27145194    19881527    19495411    20565788    22047402    22753475    23254933   

EMBL

AY769299    AAV34841.1    JF265057    AEL28888.1    NWSH01000679    PCG74845.1    + More
AF429975    ODYU01011923    AAL26577.1    SOQ57944.1    NWMT01000131    PCC99222.1    KQ461155    KPJ08233.1    AK401317    KQ459232    BAM17939.1    KPJ02699.1    HQ424764    ADT80708.1    GU084325    ACY95358.1    AB180428    BAD26672.1    GECU01031667    JAS76039.1    QOIP01000005    RLU23014.1    KZ288234    PBC31424.1    KQ434960    KZC12672.1    KQ978223    KYM96260.1    GL441542    EFN64676.1    KQ982402    KYQ56835.1    GL888002    EGI69274.1    KQ976598    KYM79588.1    LBMM01002990    KMQ94102.1    ADTU01001034    EF179459    ABM55465.1    JTDY01010426    KOB58207.1    GL451439    EFN79291.1    GECL01003387    JAP02737.1    KY809875    ATI09799.1    AK416968    BAN20183.1    NEVH01021921    PNF19484.1    GBGD01003687    JAC85202.1    ACPB03000489    JO494999    JO495014    GAHY01001754    AEL79229.1    JAA75756.1    PYGN01000555    PSN44317.1    AY961496    AAX62398.1    NNAY01000245    OXU29746.1    AAZX01001202    KK854496    PTY16367.1    KK853244    KDR09435.1    AM049105    CAJ17405.1    APGK01019263    BT126518    KB740098    KB632331    AEE61482.1    ENN81375.1    ERL92613.1    AM049107    CAJ17407.1    GDKW01001319    JAI55276.1    GU120464    ACY71314.1    AM049106    CAJ17406.1    GDAI01001239    JAI16364.1    KC507353    AHB12476.1    JRES01001695    KNC20886.1    GFDG01002428    JAV16371.1    GFDF01004789    JAV09295.1    MVBO01000060    OZJ03966.1    PYGN01000237    PSN50486.1    AJVK01033650    AJVK01035956    EU045353    ABV44750.1    GFDG01002429    JAV16370.1    EF070505    ABM55571.1    GAMD01002928    JAA98662.1    GGFM01000240    MBW20991.1    GGFK01000785    MBW34106.1    GGFJ01011346    MBW60487.1    MVGT01003949    OVA02549.1    MVGT01000481    OVA16807.1    ADMH02000378    ETN66775.1    CM002927    KGN47388.1    AMQN01007762    AMQN01007763    KB301320    ELU05713.1    AB042860    BAA96072.1   

Proteomes

UP000218220    UP000243750    UP000053240    UP000053268    UP000279307    UP000242457    + More
UP000005203    UP000076502    UP000078542    UP000000311    UP000075809    UP000007755    UP000078540    UP000036403    UP000005205    UP000037510    UP000008237    UP000235965    UP000015103    UP000245037    UP000215335    UP000002358    UP000192223    UP000027135    UP000019118    UP000030742    UP000095301    UP000037069    UP000092462    UP000195402    UP000000673    UP000235220    UP000029981    UP000089565    UP000014760   

PRIDE

Q5UAQ9   

Pfam

PF01779   Ribosomal_L29e

Interpro

IPR002673   Ribosomal_L29e       

ProteinModelPortal

Q5UAQ9   G0ZEH9   A0A2A4JS32   Q95V37   A0A2A4AQK4   A0A194QRT8   + More
I4DJ49   E7DZ61   D1LYQ1   Q6F462   A0A1B6HMY9   A0A3L8DRF2   A0A2A3EIX0   A0A088ACQ3   A0A154PLE3   A0A151IAJ1   E2APH7   A0A151X8X8   F4W992   A0A195B509   A0A0J7KUJ8   A0A158P0Z1   A2IAE5   A0A0L7K4Q9   E2BYE2   A0A0V0G3S6   A0A2S0DSS8   R4WCL3   A0A2J7PT32   A0A069DNP0   G1K0B8   A0A2P8YJ89   Q56FK4   A0A232FG56   K7IV47   A0A2R7W9L8   A0A1W4WTQ2   A0A067QKI3   Q4GXB8   J3JTG2   Q4GXB6   A0A0P4VLI8   D1M840   Q4GXB7   A0A0K8TPR2   A0A1I8M4X7   A0A109NI18   A0A0L0BLG9   A0A1L8ECA3   A0A1L8DSJ8   A0A261Y037   A0A2P8Z1W2   A8CAG1   A0A1L8ECB1   A2I402   T1E8B0   A0A2M3YXK7   A0A2M3ZZV8   A0A2M4C576   A0A200PWF2   A0A200R257   W5JUZ9   A0A2I4DE26   A0A0A0KCX6   A0A1S3C7U0   R7UHZ6   Q9MAW5   A0A2I4F1X6  

PDB

6IP8     E-value=3.78913e-08,     Score=131

KEGG

693065    K02905 large subunit ribosomal protein L29e | (RefSeq) RpL29; ribosomal protein L29

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0006412   GO:0003735   GO:0005622   GO:0008152   GO:0004588   GO:0006221   GO:0006402   GO:0046872   GO:0003824  

PANTHER

PTHR12884  

Length:

73

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.84836

inside

1  -  73

 

 

Pi

137.849311

Theta

118.138895

Tajima's D

-0.36351

CLR

6.008322

CSRT

0.276486175691215

Interpretation

Uncertain