Silkworm Genome Informatics Database

Gene

KWMTBOMO10205

Pre Gene Modal

BGIBMGA005607

Annotation

PREDICTED:_uncharacterized_protein_LOC106119200_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr17(-):4817777-4847347 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.286

CDS

ATGTATGGTTTATCGGTAGTGTTGGCGGTTTTCCTGGTGTTCGCGGGCCCTTCCTGCACCGGCTCAGATAATTTAGCGCTGCTGATTGACACTCTCAAGACAGTTCATCGAACGGTGTGTGATGATGAGCAAGTGTCCTTGGCCTGTCCCACAGGAACGTCTATCAGCATTCAAGTCGCACAGTACGGGAATGCTGCGCCGAAAGACCAGGGTTGTGTGGCGGAGACTACGCTGATAGGCACGGAAGGGGAGAAGAAATGCAAATGGCCAAACTCAATGCAGTATTCGCTTCTACAAACTGTGGTTCAGGAGTGCCAGAAGAAGTCCCAGTGCATCTTCAGTACGACGCTGAAGCCAGGACTAGCGGATCCCTGTCCCTCTGCGAGGAAATATGTTGAAATGGCATACAAATGTCGGCCTTTTGAATTTCGGAGCCGCACGGTATGCGAGAATGAGGTTGTGAAGCTGAGCTGCAACCGTAACTCGAGGATCGCGATATTTGACGCCAAGTATGGAAGAACACCGTATGAGACGATATCTTGTCCACAAGCACAGGGTCTGCCAGACGAAAAATGCTCGGCGCCGTATACTGTTGAGAAGGTAATGCAGATATGTCTCGGGCGGAGAAGATGTCAAATCGTCGTAAACGCAAGGAATTTTGAATCTACTTGCAAACCGCATACGACACCTTATCTCAAAATCGTTTATGCTTGTGTGCCTTTAGGTGTTCTGAATGAACGCTATGAGAGCGCAATGGAAAGAGACGAAATCGACGAAGACAATGTTCAAAATGGAAATCTGTTTGATGAATCTGAAGAGGCTGGAGAAAAATTCAGTGAACCCGGCACCGGGTCGGCAGTACAACTACCCGCTGGAGAACCGACCATTGATCTGGACAAAATTGAGGAAACTACAGTACGTGCTACTAAAATCCCCCTACAAAAAGGACCAGATACAATATTGAACCCGAACATTTTTATGTATACAGGCTTAACAGTCACTATTATTGTTATATGCATACTCATATTTATTGGTTTCTACTGTTATAAAACGAGAAAAGAAAAAAACAATTCAAAAAACGGCAATATGTTTTCGACTGAAGCACCCAATGTGTTCAGCGACATTGCCTCGGACGAGGACAACGACGTTGACGTCAGTCATATATCTGGAACCTTCTACGATCCGTTGCATCCAGACATGATGGTGTATAGAGATGGTGTAACCAGAAACACTATACGAGCTATGAGACCACTCTCCACAGTATATCCATGTGCAGGCGTTAGTATGTATGGTAATATGGACACTATGCCTTCCCAATCTAGAAACATAGATGCTAGATTCACTAGAAGTAGATGTAAAGAGGAACAAAGTACACCTGAATTGCTCAGCCCGAGATGTCTCGGAACTGATTCCAATTCCCAATTTTATTACGGGTGGCGACAAGAGCTATGA

Protein

MYGLSVVLAVFLVFAGPSCTGSDNLALLIDTLKTVHRTVCDDEQVSLACPTGTSISIQVAQYGNAAPKDQGCVAETTLIGTEGEKKCKWPNSMQYSLLQTVVQECQKKSQCIFSTTLKPGLADPCPSARKYVEMAYKCRPFEFRSRTVCENEVVKLSCNRNSRIAIFDAKYGRTPYETISCPQAQGLPDEKCSAPYTVEKVMQICLGRRRCQIVVNARNFESTCKPHTTPYLKIVYACVPLGVLNERYESAMERDEIDEDNVQNGNLFDESEEAGEKFSEPGTGSAVQLPAGEPTIDLDKIEETTVRATKIPLQKGPDTILNPNIFMYTGLTVTIIVICILIFIGFYCYKTRKEKNNSKNGNMFSTEAPNVFSDIASDEDNDVDVSHISGTFYDPLHPDMMVYRDGVTRNTIRAMRPLSTVYPCAGVSMYGNMDTMPSQSRNIDARFTRSRCKEEQSTPELLSPRCLGTDSNSQFYYGWRQEL

Uniprot

A0A2A4JVK7 A0A2A4JXC7 A0A2H1VDG0 A0A3S2LYM4 A0A194QB52 A0A212EN37 + More
A0A194QSE5 A0A2A4JVS6 A0A1Y1NAX1 A0A1Y1NC36 A0A194QXE0 A0A2A3EDE0 A0A0P5S7S5 A0A0P5CJD4 A0A164X6N9 A0A0P5H0W3 A0A0P5JNA8 A0A0P4Y7S0

Pubmed

26354079 22118469 28004739

EMBL

NWSH01000490 PCG76041.1 PCG76042.1 ODYU01001960 SOQ38878.1 RSAL01000110 + More
RVE47158.1 KQ459232 KPJ02692.1 AGBW02013741 OWR42896.1 KQ461155 KPJ08239.1 NWSH01000521 PCG75886.1 GEZM01010838 JAV93785.1 GEZM01010837 JAV93786.1 KPJ08241.1 KZ288275 PBC29728.1 GDIQ01100086 JAL51640.1 GDIP01170575 JAJ52827.1 LRGB01001005 KZS13921.1 GDIQ01239741 JAK11984.1 GDIQ01222343 JAK29382.1 GDIP01232332 JAI91069.1

Proteomes

UP000218220 UP000283053 UP000053268 UP000007151 UP000053240 UP000242457 + More
UP000076858

Pfam

PF02140 Gal_Lectin

Interpro

IPR000922 Lectin_gal-bd_dom

ProteinModelPortal

A0A2A4JVK7 A0A2A4JXC7 A0A2H1VDG0 A0A3S2LYM4 A0A194QB52 A0A212EN37 + More
A0A194QSE5 A0A2A4JVS6 A0A1Y1NAX1 A0A1Y1NC36 A0A194QXE0 A0A2A3EDE0 A0A0P5S7S5 A0A0P5CJD4 A0A164X6N9 A0A0P5H0W3 A0A0P5JNA8 A0A0P4Y7S0

PDB

5H4S E-value=1.31438e-10, Score=160

KEGG

101738829 no KO assigned | (RefSeq) uncharacterized LOC101738829

GO

GO:0030246 GO:0016021 GO:0050660 GO:0016491 GO:0003824 GO:0008152 GO:0004588 GO:0006221 GO:0006402 GO:0046872

SignalP

Position: 1 - 21, Likelihood: 0.996324

Length:

483

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

30.99868

Exp number, first 60 AAs:

7.59718000000001

Total prob of N-in:

0.34065

outside

1 - 324

TMhelix

325 - 347

inside

348 - 483

Pi

211.286723

Theta

169.944722

Tajima's D

0.71146

CLR

0.398596

CSRT

0.573821308934553

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics