Gene

KWMTBOMO10202

Pre Gene Modal

BGIBMGA005608

Annotation

PREDICTED:_glucose_dehydrogenase_[FAD?_quinone]-like_[Plutella_xylostella]

Location

Bomo_Chr17(-):4701896-4714403      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.618

CDS

ATGCTCGGTGGGAGCAGCGGTATAAATGGAATGATTTACATTAAGGGAAACTTTAAAGATTACAAAAGATGGTATGATGCAGGAAATGAGGAATGGCATCCGAACGTTGTAGAAAAATATTTTATAAAAGCAGAAAATCTTCAAGATACTGAACTATTAAAATCCGCTGAGGTTAGAAAAAATTACGGAACAAGAGGGCCTCTAATAATAAATTCATTTAACGTAACATCAAGGCGCATTGCCGATAAAATAATAGAAGCTTGGGATGAGATTGGATTCAAAAAAGTTTTGGATGTTAGTAATCTTAACAACTTACGGGGATCTGGAAGGTTTAGGGCATCTGCTGCTAGTGGTACAAGAGAAAGTACGGCTAAAGCATATTTAAATCCAATAAAAAACAGAAAAAACCTTTTCATTGTTAAGAATGCTCTTGTTACCAAGGTTTTAATAAACAATAAAACTAAGGAGGTATTTGGGGTATCTGTAGAAATTCATGGAAAAAAATTCACTTTTTATGCAAACAAGGAAGTCATTTTAAGTGCAGGTTCAATTAATACACCGCAGCTGCTGATGTTGTCTGGAGTTGGACCGCGGGAACATCTTATTTCAAAGAATATTTTTTGTAAAGTAAACTCTCGCATGGTTGGTGAAAATTTACAAGATCATGGTATAGTACTTGTTCCTGTATTTGGTAAAGAGCCGGAAGACCAAACGACAGCAGAAAAAAGTTTTGCTGCCATACAATATCTTTACAATCGTGAAGGGTACTTAGGTGGTAAAAGTACCCCGGACGTTTCAGCATTTTATTCAGAATGTGCCAACCAAACATATCCACAATTTCAAAGCGTTCCTCTTCTTTTCGGTAAAAATTCGTCATCAGTGCGTGAATTTTACAACACTATCAAAGTGAAACCTTCAGTGATAGAATCAATAGTGAAACAAAACATTAACAATGCTTTGTATATTTTTCGATTTATTTTGTTACATCCTTTTTCTAAAGGAAACATTAAGTTGCGTTCAAATGATCCAAAACAATATCCGATTATTTACGCTAATTATTTTAAAGATCCAAGGGACTTAGATGCAGCCGTAGTCGGAATTAAAATGCTGACTAAAATCGTGAATACTAAATATTTCAAATCGATTGGTGGATTTTTAGGCAGAATAGACTGGCCTCCTTGTAATAAATTCGTACTCGACACCAATGAATATTGGAGATGCATAGCTTTGAATTTTATCACCACCGTGTATCATCCAACAGGTACTACGAGAATGGGACGTAATATAAACGTGTCTGTTGTCGACAGCAGACTAAGAGTTCATGGCCTTAAAAAACTTCGCATAATAGACGCAGGTGTAATGCCATTTACAGTCAGTGCAAATACCAACGCTCCAAGTGTGATGGTGGGTGAAAGAGGAGCAGATTTGGTTAAAGAAGATTACAGAAAGTGTCCTTCAGGACGATGTCCATGTTAA

Protein

MLGGSSGINGMIYIKGNFKDYKRWYDAGNEEWHPNVVEKYFIKAENLQDTELLKSAEVRKNYGTRGPLIINSFNVTSRRIADKIIEAWDEIGFKKVLDVSNLNNLRGSGRFRASAASGTRESTAKAYLNPIKNRKNLFIVKNALVTKVLINNKTKEVFGVSVEIHGKKFTFYANKEVILSAGSINTPQLLMLSGVGPREHLISKNIFCKVNSRMVGENLQDHGIVLVPVFGKEPEDQTTAEKSFAAIQYLYNREGYLGGKSTPDVSAFYSECANQTYPQFQSVPLLFGKNSSSVREFYNTIKVKPSVIESIVKQNINNALYIFRFILLHPFSKGNIKLRSNDPKQYPIIYANYFKDPRDLDAAVVGIKMLTKIVNTKYFKSIGGFLGRIDWPPCNKFVLDTNEYWRCIALNFITTVYHPTGTTRMGRNINVSVVDSRLRVHGLKKLRIIDAGVMPFTVSANTNAPSVMVGERGADLVKEDYRKCPSGRCPC

Cofactor

FAD

Similarity

Belongs to the GMC oxidoreductase family.

Uniprot

H9J7W7   A0A0L7L9T7   A0A2A4JKJ5   A0A2H1WG27   A0A2A4JLJ2   A0A2A4IZI4   + More
A0A2A4JW72   A0A2H1WT25   H9JYB9   A0A2H1VF08   A0A2H1VF04   A0A2H1VEJ4   A0A194QB47   A0A194QB82   A0A2H1VF60   A0A194QSF0   A0A2A4IYS9   A0A212FF54   A0A2W1B5P9   A0A2H1WZL6   A0A194QAU5   A0A0N1IJ07   A0A0L7L582   H9J861   A0A1B0GIG3   A0A1L8E0M0   A0A1L8E037   A0A0C9QE18   A0A1L8E0E7   A0A1L8DZX6   H9JTY8   A0A182SDY4   A0A182Q3I8   A0A182R5V7   A0A194PSS7   A0A2H1V0S8   A0A1Y9H2C4   A0A182MUT2   A0A2J7PXQ0   E2ABB7   F4WRC9   A0A3S2P1X7   A0A182JHR5   K7J277   A0A1B0DMM3   A0A1Q3FK91   A0A182UDY6   I4DNK7   H9JTY7   A0A1I8N6K3   A0A1L8E0T8   A0A1B6F402   B0WJG6   A0A195BBJ1   T1PFB8   A0A1B6MBY6   Q7QFX9   A0A158NUQ9   A0A151WNR9   A0A182FZT4   A0A2K8FTL4   E0VUB2   A0A0A9W6I4   A0A0N0PE61   W5J6D5   A0A1B6HJF4   E0VUA7   H9JLQ9   A0A1B6LHN9   A0A154PBS2   E0VUA8   A0A151IVV0   A0A2A4K4K5   A0A2H8TE31   A0A151J2Y2   A0A023EVK5   E2AAW1   A0A084VW89   A0A1Q3FZM7   A0A146LFQ3   A0A2J7PXM0   A0A2K8FTP1   A0A2P8ZHS7   A0A2J7RBH7   A0A151I6R9   H9JI92   A0A084VW88   A0A2P8YRH6   A0A194QNE6   A0A1Y9H2C5   F4WRC7   A0A154NWQ8   A0A0L7KNL7   A0A2W1BWE7   A0A151I6R6   A0A310SP23   A0A2J7Q2K0  

Pubmed

19121390    26227816    26354079    22118469    28756777    20798317    + More
21719571    20075255    22651552    25315136    12364791    14747013    17210077    21347285    20566863    25401762    20920257    23761445    24945155    24438588    26823975    29403074   

EMBL

BABH01020059    JTDY01002039    KOB72263.1    NWSH01001107    PCG72577.1    ODYU01008368    + More
SOQ51896.1    PCG72578.1    NWSH01004383    PCG65171.1    NWSH01000521    PCG75884.1    ODYU01010827    SOQ56167.1    BABH01042896    ODYU01002217    SOQ39415.1    ODYU01002218    SOQ39418.1    ODYU01001942    SOQ38842.1    KQ459232    KPJ02687.1    KPJ02689.1    SOQ39416.1    KQ461155    KPJ08244.1    NWSH01004668    PCG64789.1    AGBW02008849    OWR52369.1    KZ150306    PZC71499.1    ODYU01012241    SOQ58442.1    KPJ02554.1    KQ460044    KPJ18321.1    JTDY01002835    KOB70627.1    BABH01039828    AJWK01014080    GFDF01002039    JAV12045.1    GFDF01002040    JAV12044.1    GBYB01012653    JAG82420.1    GFDF01002042    JAV12042.1    GFDF01002041    JAV12043.1    BABH01003799    AXCN02000040    KQ459595    KPI96023.1    ODYU01000155    SOQ34448.1    AXCM01001593    NEVH01020853    PNF21103.1    GL438237    EFN69238.1    GL888284    EGI63346.1    RSAL01000051    RVE50264.1    AAZX01008181    AJVK01016891    GFDL01007123    JAV27922.1    AK402986    BAM19497.1    BABH01003798    GFDF01001902    JAV12182.1    GECZ01024829    JAS44940.1    DS231960    EDS29162.1    KQ976532    KYM81564.1    KA646603    AFP61232.1    GEBQ01006583    JAT33394.1    AAAB01008844    EAA06000.3    ADTU01026683    KQ982905    KYQ49514.1    KY618825    AQW43011.1    DS235784    EEB16968.1    GBHO01040588    JAG03016.1    KPJ18306.1    ADMH02002107    ETN58958.1    GECU01032991    JAS74715.1    EEB16963.1    BABH01005224    BABH01005225    BABH01005226    GEBQ01016745    JAT23232.1    KQ434869    KZC09325.1    EEB16964.1    KQ980881    KYN11981.1    NWSH01000190    PCG78592.1    GFXV01000539    MBW12344.1    KQ980314    KYN16689.1    GAPW01000526    JAC13072.1    GL438191    EFN69424.1    ATLV01017521    KE525172    KFB42233.1    GFDL01002031    JAV33014.1    GDHC01012817    JAQ05812.1    PNF21089.1    KY618826    AQW43012.1    PYGN01000053    PSN56054.1    NEVH01005904    PNF38171.1    KQ978473    KYM93715.1    BABH01022249    ATLV01017518    ATLV01017519    ATLV01017520    KFB42232.1    PYGN01000411    PSN46845.1    KQ461194    KPJ06879.1    EGI63344.1    KQ434773    KZC04023.1    JTDY01008426    KOB64574.1    KZ149916    PZC77944.1    KYM93713.1    KQ759784    OAD62862.1    NEVH01019370    PNF22812.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053268    UP000053240    UP000007151    + More
UP000092461    UP000075901    UP000075886    UP000075884    UP000075883    UP000235965    UP000000311    UP000007755    UP000283053    UP000075880    UP000002358    UP000092462    UP000075902    UP000095301    UP000002320    UP000078540    UP000007062    UP000005205    UP000075809    UP000069272    UP000009046    UP000000673    UP000076502    UP000078492    UP000030765    UP000245037    UP000078542   

PRIDE

H9J7W7    H9JYB9    H9J861    H9JTY8    H9JTY7    H9JLQ9    + More
H9JI92   

Pfam

PF05199   GMC_oxred_C        + More
PF00732   GMC_oxred_N

Interpro

IPR007867   GMC_OxRtase_C        + More
IPR012132   GMC_OxRdtase       
IPR000172   GMC_OxRdtase_N       
IPR036188   FAD/NAD-bd_sf       

SUPFAM

SSF51905   SSF51905       

Gene 3D

3.50.50.60    

ProteinModelPortal

H9J7W7   A0A0L7L9T7   A0A2A4JKJ5   A0A2H1WG27   A0A2A4JLJ2   A0A2A4IZI4   + More
A0A2A4JW72   A0A2H1WT25   H9JYB9   A0A2H1VF08   A0A2H1VF04   A0A2H1VEJ4   A0A194QB47   A0A194QB82   A0A2H1VF60   A0A194QSF0   A0A2A4IYS9   A0A212FF54   A0A2W1B5P9   A0A2H1WZL6   A0A194QAU5   A0A0N1IJ07   A0A0L7L582   H9J861   A0A1B0GIG3   A0A1L8E0M0   A0A1L8E037   A0A0C9QE18   A0A1L8E0E7   A0A1L8DZX6   H9JTY8   A0A182SDY4   A0A182Q3I8   A0A182R5V7   A0A194PSS7   A0A2H1V0S8   A0A1Y9H2C4   A0A182MUT2   A0A2J7PXQ0   E2ABB7   F4WRC9   A0A3S2P1X7   A0A182JHR5   K7J277   A0A1B0DMM3   A0A1Q3FK91   A0A182UDY6   I4DNK7   H9JTY7   A0A1I8N6K3   A0A1L8E0T8   A0A1B6F402   B0WJG6   A0A195BBJ1   T1PFB8   A0A1B6MBY6   Q7QFX9   A0A158NUQ9   A0A151WNR9   A0A182FZT4   A0A2K8FTL4   E0VUB2   A0A0A9W6I4   A0A0N0PE61   W5J6D5   A0A1B6HJF4   E0VUA7   H9JLQ9   A0A1B6LHN9   A0A154PBS2   E0VUA8   A0A151IVV0   A0A2A4K4K5   A0A2H8TE31   A0A151J2Y2   A0A023EVK5   E2AAW1   A0A084VW89   A0A1Q3FZM7   A0A146LFQ3   A0A2J7PXM0   A0A2K8FTP1   A0A2P8ZHS7   A0A2J7RBH7   A0A151I6R9   H9JI92   A0A084VW88   A0A2P8YRH6   A0A194QNE6   A0A1Y9H2C5   F4WRC7   A0A154NWQ8   A0A0L7KNL7   A0A2W1BWE7   A0A151I6R6   A0A310SP23   A0A2J7Q2K0  

PDB

5OC1     E-value=2.21694e-36,     Score=383

KEGG

101739248    K00108 choline dehydrogenase [EC:1.1.99.1] | (RefSeq) glucose dehydrogenase [FAD, quinone]-like

PATHWAY

00260    Glycine, serine and threonine metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0050660   GO:0016614   GO:0016021   GO:0016829   GO:0004344   GO:0016491   GO:0003824   GO:0008152   GO:0004588   GO:0006221   GO:0006402   GO:0046872   GO:0055114  

Length:

491

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01785

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00056

outside

1  -  491

 

 

Pi

29.383991

Theta

210.641827

Tajima's D

1.907188

CLR

0

CSRT

0.865206739663017

Interpretation

Uncertain