SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10201
Pre Gene Modal
BGIBMGA005609
Annotation
Uncharacterized_protein_OBRU01_12558_[Operophtera_brumata]
Location in the cell
Mitochondrial   Reliability : 2.399
 

Sequence

CDS
ATGCTTGGTGGCAGCGGTGGTATCAACGGAATGATTTACTTTAAAGGACACGATTTTGATTTCCAACGATGGTACGACGCTGGGAACAAAGAATGGCATCCAAAAATAGTGAGATATTTTTATAAGAAACTCGAAAGTTTACAGGATGCTTCCCAGTTGCGGAATCCATTTATTAGGAGAAACTATGGCCTCAACGGCAACCTTATCATAAATAGTCTGAACAGTACAAACGAGCATTTAATAGAAAGCGTCATAAATTCCTTTGACGAAATCAGCTTCCGACGAAATTGCGATATAAGTGCTCTAAATGCGTTCGGGTCAGGAAAATTTAAAATTAACGGAAGTAATGGTAGACGAGTAAGCACAGCTAAAGCGTATTTAAACACGATACAGAAACGAAAGAATTTAAAAATTATAACAAATGCTTTTGTTACTAAAATCTTAATAGATTCTGTGACTAAAACTGTTGAAGGAGTAGAAGTAGAAGTACAAGGACAAAAGAAGACATTTTACGCAAATTTAGAAGTGATTTTGAGTGCAGGAACAATTAATACACCTCAAATATTGATGATATCAGGAATAGGTCCCGAAGATCAACTGAGTTCAAAAGGAATTTCATGCAAAGTAGATTCTCCGATGGTTGGGAAGAATCTTCAGGATCACGCTATTGTACCAGTTACAGTTTATGGTGATAAGCCAAAAAAAAAGAAGAGTGAAGCTGAACGTAATTTTGATATAATTAGATATCTATACAACCGCAGTGGCCCTTTAGCATACATTAGCTCTCCAGGCATTGCTGCTTTGTATACCGATGACCCCAATTTACCATATCCTAAATTCCAATCTTTTCTTATCTTATATGAAAAAAATACATCCTCGGTTCGCGAAGCCTTTGAAAAACGCGGTTATAAGCAATCCGTCGTAAATTCTATTTCAAAGCTAAATACTAACCACGCTCTGTATCATTTCGCGATAACACTTTTGCATCCACATTCAAAAGGTTACATTCGGTTACGTTCTAATAATCCTAAAGATCCTCCCCTAATTTACACCAACTATTTTAGCGATCCAAGAGATCTGAGATCATGCGTACGCGGTGTCAAAATGCTAACGAAAATCACAAGAACAACATATTTTAAATCTATAAATGGGTTTCTCGGTCGTATTAATTTGGAGCCGTGTAATGGTTATGAATTGGACAGTGCTGAATATTGGAAATGTATATGTTTGAATCTGGTAACGACTGTATACCATCCGGTTGGTACTTGTAAAATGGGCGTAGAACCAAAGACTTCAGTTGTGAGTAGTCGTTTGAAAGTCTTCGGTGTTGCTAAGCTTCGAATTATAGACGCTAGCGTAATGCCGAATGAAATTAGTGGAAATACAAACGCTGCTTGTGCTATGATCGGAGAAAGAGGAGCTGCAATCGTAAAGGAAGATTACTCAAAGGAAAAGCAGTACTCAATATAA
Protein
MLGGSGGINGMIYFKGHDFDFQRWYDAGNKEWHPKIVRYFYKKLESLQDASQLRNPFIRRNYGLNGNLIINSLNSTNEHLIESVINSFDEISFRRNCDISALNAFGSGKFKINGSNGRRVSTAKAYLNTIQKRKNLKIITNAFVTKILIDSVTKTVEGVEVEVQGQKKTFYANLEVILSAGTINTPQILMISGIGPEDQLSSKGISCKVDSPMVGKNLQDHAIVPVTVYGDKPKKKKSEAERNFDIIRYLYNRSGPLAYISSPGIAALYTDDPNLPYPKFQSFLILYEKNTSSVREAFEKRGYKQSVVNSISKLNTNHALYHFAITLLHPHSKGYIRLRSNNPKDPPLIYTNYFSDPRDLRSCVRGVKMLTKITRTTYFKSINGFLGRINLEPCNGYELDSAEYWKCICLNLVTTVYHPVGTCKMGVEPKTSVVSSRLKVFGVAKLRIIDASVMPNEISGNTNAACAMIGERGAAIVKEDYSKEKQYSI

Summary

Cofactor
FAD
Similarity
Belongs to the GMC oxidoreductase family.
EMBL
BABH01020059    JTDY01002039    KOB72263.1    NWSH01001107    PCG72578.1    ODYU01008368    + More
SOQ51896.1    PCG72577.1    NWSH01004383    PCG65171.1    BABH01042896    ODYU01002217    SOQ39416.1    ODYU01010827    SOQ56167.1    ODYU01001942    SOQ38842.1    KQ459232    KPJ02687.1    ODYU01002218    SOQ39418.1    KPJ02689.1    SOQ39415.1    NWSH01000521    PCG75884.1    KQ461155    KPJ08244.1    AK401606    BAM18228.1    NWSH01004668    PCG64789.1    KQ460044    KPJ18321.1    KPJ02554.1    KZ150306    PZC71499.1    ODYU01012241    SOQ58442.1    BABH01039828    AGBW02008849    OWR52369.1    BABH01003799    AXCN02000040    AXCM01001593    GFDF01002042    JAV12042.1    ODYU01000155    SOQ34448.1    GFDF01002041    JAV12043.1    KQ971348    EFA05531.1    JTDY01000066    KOB79079.1    GAPW01000526    JAC13072.1    GFDL01007123    JAV27922.1    KY618825    AQW43011.1    JTDY01007102    KOB65457.1    AAAB01008844    EAA06000.3    CH477290    EAT44639.1    JTDY01002835    KOB70627.1    KY938814    ASA46455.1    KQ978473    KYM93710.1    KQ461194    KPJ06879.1    ADMH02002107    ETN58958.1    KQ459603    KPI92960.1    GBYB01012653    JAG82420.1    CH916370    EDW00251.1    JTDY01008426    KOB64574.1    DS231960    EDS29162.1    DS235784    EEB16968.1    GANO01001829    JAB58042.1    EAT44642.1    GAPW01000947    JAC12651.1    BABH01003798    ETN58959.1    KK107261    EZA53937.1    JXUM01024562    KQ560694    KXJ81238.1    APCN01003121    QOIP01000012    RLU16172.1    KF717661    AIO02863.1    KF717664    AIO02866.1    GEDC01017950    JAS19348.1    KQ976532    KYM81561.1    EGK96367.1    EGK96368.1    GFDL01002031    JAV33014.1    AJVK01016891    AJWK01014080    KQ981296    KYN43080.1    EDS29163.1    GL763984    EFZ18935.1    DS231832    EDS31767.1    KF717658    AIO02860.1    KF717656    KF717657    KF717660    KF717667    AIO02858.1    AIO02859.1    AIO02862.1    AIO02869.1    GGFK01006898    MBW40219.1    UFQS01000011    UFQT01000011    SSW97203.1    SSX17589.1    PYGN01000053    PSN56054.1    ADTU01026685    KQ980314    KYN16692.1    GL438237    EFN69238.1    APGK01055703    APGK01055704    KB741269    ENN71448.1    GL438191    EFN69423.1    KQ434869    KZC09326.1    GGFK01006251    MBW39572.1    LBMM01005695    KMQ91287.1    GGFK01006105    MBW39426.1    KA646603    AFP61232.1    ATLV01017518    ATLV01017519    ATLV01017520    ATLV01017521    KE525172    KFB42232.1    KF717655    AIO02857.1   
Pfam
PF05199   GMC_oxred_C        + More
PF00732   GMC_oxred_N
Interpro
IPR007867   GMC_OxRtase_C        + More
IPR012132   GMC_OxRdtase       
IPR000172   GMC_OxRdtase_N       
IPR036188   FAD/NAD-bd_sf       
IPR027424   Glucose_Oxidase_domain_2       
SUPFAM
SSF51905   SSF51905       
Gene 3D
PDB
5OC1     E-value=3.82487e-36,     Score=381

Ontologies

Topology

Length:
489
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01083
Exp number, first 60 AAs:
0.00016
Total prob of N-in:
0.00082
outside
1  -  489
 
 

Population Genetic Test Statistics

Pi
196.400557
Theta
199.192218
Tajima's D
0.116247
CLR
0.001252
CSRT
0.396030198490075
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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