Gene

KWMTBOMO10195  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005612

Annotation

PREDICTED:_globin_1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr17(-):4228247-4262522      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.2 Mitochondrial   Reliability : 1.817

CDS

ATGGGCACCTGGTTTAGCTACATGTGGTGGGGTGGGGATCCGGACGTGGTGAACCCGGTCTCCGGGCTCACGAGGAGAGAGATACACGCAGTTCAAAAATCATGGGCCCCCGTCAACGCCAACTCTTTTGCAACCGGCAGTGAACTATTGAGAAGACTATTCAACACGTATCCTGACACCAAAGAATATTTCAAAATGGTCCGGAAGCTTCCCGAGGAGGAGTACTCGCAGAACCCGCAGTTCAAGGCGCACGTCATCAATTTAATGACGTCATTGAATTTGGCCGTCAACAATCTGAATCAACCTGAGATAGTTGCTGCCATGATGACTAAACTTGGTGAATCTCACAGGAGGCGACAGATCAAGGAGAAGAATTTTCATGAGCTAAAAGAAGTTATAGTGAAACTGTTCATAGATGTACTACGTTTGGACGACGCCACACTGTCAGCGTGGGGGAAGACTGTCGAATTCTGGTACAAGCATATATTTGTCACATTGAATAGCCCGGAAGAGACAAGATAA

Protein

MGTWFSYMWWGGDPDVVNPVSGLTRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNLNQPEIVAAMMTKLGESHRRRQIKEKNFHELKEVIVKLFIDVLRLDDATLSAWGKTVEFWYKHIFVTLNSPEETR

Similarity

Belongs to the globin family.

Uniprot

B6ZIV8   B6ZIV9   A0A2A4JGZ8   A0A194QB77   A0A212F1S4   A0A2Z5U8A2   + More
A0A3S2LJK4   A0A194QXE5   A0A194QAW6   A0A212F1Q4   A0A0L7L6B5   A0A212F1Q5   A0A2H1VU60   A0A0L7L6S9   A0A2A4JK54   A0A0C9QI71   A0A2J7RQJ1   K7INA7   A0A232EVI6   A0A0T6B576   D6WV70   A0A067RER1   A0A087UB53   A0A0L7R0V2   Q3MQ26   A0A2P8Y2J0   A0A2J7RQK5   N6TIP6   A0A0L7R0Z8   A0A1Y1LGL8   A0A1Y1LBA0   D6WV71   U4UEU2   V5H2Z2   Q14SN0   V5GLC7   A0A2A3E2S2   A0A067RP63   A0A158NI02   A0A1W7RAG4   A0A1A9UTN0   A0A151WR55   A0A1W7RAG5   A0A336LW33   A0A195AWG8   F4WPU3   A0A1A9ZTC8   A0A0A1WUY3   A0A1B0CM37   A0A026WVZ6   D3TNS5   A0A1A9YK41   A0A1B0BBW2   R4V4K7   A0A195F6J8   A0A195CKP6   A0A1B0G6S1   V5YLS0   A0A2L2XXN4   A0A195EH31   A0A0L0CC47   E2AZW6   A0A2P2I3P9   A0A1A9WJJ0   F2Q9W7   T1GF38   C3YSB9   C3Y525   A0A1D1W7H5   A0A1A9WJJ1   E2C8N8   T1P825   A0A1B6DUK0   A0A1W4VFX7   A0A1B2RVC8   A0A1B6DAX2   A0A1I8PMP2   A0A131YVK2   A0A224ZBU9   A0A1B0G6S0   F2Q9X0   L7LXU0   A0A023FNC3   A0A1E1WXZ2   Q575S4   E9IBK1   A0A154NY93   A0A034WEZ5   A0A1Y3BF01   A0A212D9X3   U5Y3X1   V5YNF6   A0A3S0ZMR8  

Pubmed

19121390    19059317    26354079    22118469    26227816    20075255    + More
28648823    18362917    19820115    24845553    29403074    23537049    28004739    16698031    21347285    21719571    25830018    24508170    30249741    20353571    26561354    26108605    20798317    18563158    27649274    25315136    26830274    28797301    25576852    28503490    16484786    27762356    21282665    25348373   

EMBL

BABH01020112    AB440198    BAG86628.1    AB440199    BAG86629.1    NWSH01001429    + More
PCG71251.1    KQ459232    KPJ02684.1    AGBW02010829    OWR47671.1    AP017549    BBB06961.1    RSAL01000090    RVE48054.1    KQ461155    KPJ08246.1    KPJ02683.1    OWR47669.1    JTDY01002631    KOB71053.1    OWR47670.1    ODYU01004428    SOQ44286.1    KOB71054.1    NWSH01001128    PCG72465.1    GBYB01012888    GBYB01014428    JAG82655.1    JAG84195.1    NEVH01001336    PNF43093.1    NNAY01002008    OXU22325.1    LJIG01009701    KRT82554.1    KQ971363    EFA09084.2    KK852549    KDR21528.1    KK119064    KFM74592.1    KQ414669    KOC64472.1    AM086629    AM086630    CAJ31108.1    PYGN01001014    PSN38466.1    PNF43098.1    APGK01036285    KB740939    ENN77703.1    KOC64471.1    GEZM01061957    JAV70167.1    GEZM01061956    JAV70168.1    EFA09085.1    KB632061    ERL88430.1    GALX01001253    JAB67213.1    AM158084    AM158085    CAJ43389.1    GALX01003572    JAB64894.1    KZ288419    PBC26000.1    KDR21529.1    ADTU01016131    GFAH01000251    JAV48138.1    KQ982813    KYQ50346.1    GFAH01000250    JAV48139.1    UFQS01000234    UFQT01000234    SSX01757.1    SSX22135.1    KQ976725    KYM76521.1    GL888255    EGI63772.1    GBXI01011615    JAD02677.1    AJWK01018118    KK107078    QOIP01000011    EZA60245.1    RLU16442.1    EZ423077    ADD19353.1    JXJN01011712    KC740974    AGM32798.1    KQ981763    KYN36088.1    KQ977622    KYN01300.1    CCAG010013864    AB872481    BAO18440.1    IAAA01002298    LAA00762.1    KQ978957    KYN27182.1    JRES01000623    KNC29825.1    GL444280    EFN61015.1    IACF01003021    LAB68652.1    FN773090    CBL51551.1    CAQQ02037542    GG666548    EEN57024.1    GG666487    EEN64558.1    BDGG01000017    GAV08188.1    GL453666    EFN75768.1    KA644791    AFP59420.1    GEDC01031622    GEDC01007947    JAS05676.1    JAS29351.1    KU598828    AOC38017.1    GEDC01014459    JAS22839.1    GEDV01005304    JAP83253.1    GFPF01013388    MAA24534.1    FN773093    CBL51554.1    GACK01008444    JAA56590.1    GBBK01001226    JAC23256.1    GFAC01007324    JAT91864.1    AJ635233    CM004482    CAG25618.1    OCT63981.1    GL762111    EFZ22071.1    KQ434782    KZC04551.1    GAKP01004811    JAC54141.1    MUJZ01027179    OTF78604.1    MKHE01000005    OWK14986.1    KF425757    AGZ84229.1    AB872482    BAO18441.1    RQTK01001280    RUS71051.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000283053    UP000053240    + More
UP000037510    UP000235965    UP000002358    UP000215335    UP000007266    UP000027135    UP000054359    UP000053825    UP000245037    UP000019118    UP000030742    UP000242457    UP000005205    UP000078200    UP000075809    UP000078540    UP000007755    UP000092445    UP000092461    UP000053097    UP000279307    UP000092443    UP000092460    UP000078541    UP000078542    UP000092444    UP000078492    UP000037069    UP000000311    UP000091820    UP000015102    UP000001554    UP000186922    UP000008237    UP000095301    UP000192221    UP000095300    UP000186698    UP000076502    UP000271974   

PRIDE

B6ZIV8    B6ZIV9   

Pfam

PF00042   Globin        + More
PF15964   CCCAP

Interpro

IPR012292   Globin/Proto        + More
IPR000971   Globin       
IPR009050   Globin-like_sf       
IPR002336   Erythrocruorin       
IPR001032   Leghaemoglobin       
IPR002335   Myoglobin       
IPR013314   Globin_lamprey/hagfish       
IPR031887   SDCCAG8       

SUPFAM

SSF46458   SSF46458       

Gene 3D

1.10.490.10    

ProteinModelPortal

B6ZIV8   B6ZIV9   A0A2A4JGZ8   A0A194QB77   A0A212F1S4   A0A2Z5U8A2   + More
A0A3S2LJK4   A0A194QXE5   A0A194QAW6   A0A212F1Q4   A0A0L7L6B5   A0A212F1Q5   A0A2H1VU60   A0A0L7L6S9   A0A2A4JK54   A0A0C9QI71   A0A2J7RQJ1   K7INA7   A0A232EVI6   A0A0T6B576   D6WV70   A0A067RER1   A0A087UB53   A0A0L7R0V2   Q3MQ26   A0A2P8Y2J0   A0A2J7RQK5   N6TIP6   A0A0L7R0Z8   A0A1Y1LGL8   A0A1Y1LBA0   D6WV71   U4UEU2   V5H2Z2   Q14SN0   V5GLC7   A0A2A3E2S2   A0A067RP63   A0A158NI02   A0A1W7RAG4   A0A1A9UTN0   A0A151WR55   A0A1W7RAG5   A0A336LW33   A0A195AWG8   F4WPU3   A0A1A9ZTC8   A0A0A1WUY3   A0A1B0CM37   A0A026WVZ6   D3TNS5   A0A1A9YK41   A0A1B0BBW2   R4V4K7   A0A195F6J8   A0A195CKP6   A0A1B0G6S1   V5YLS0   A0A2L2XXN4   A0A195EH31   A0A0L0CC47   E2AZW6   A0A2P2I3P9   A0A1A9WJJ0   F2Q9W7   T1GF38   C3YSB9   C3Y525   A0A1D1W7H5   A0A1A9WJJ1   E2C8N8   T1P825   A0A1B6DUK0   A0A1W4VFX7   A0A1B2RVC8   A0A1B6DAX2   A0A1I8PMP2   A0A131YVK2   A0A224ZBU9   A0A1B0G6S0   F2Q9X0   L7LXU0   A0A023FNC3   A0A1E1WXZ2   Q575S4   E9IBK1   A0A154NY93   A0A034WEZ5   A0A1Y3BF01   A0A212D9X3   U5Y3X1   V5YNF6   A0A3S0ZMR8  

PDB

2G3H     E-value=5.92867e-12,     Score=166

KEGG

100216496    K21894 cytoglobin | (RefSeq) Glob1, gb; globin 1

GO

GO:0019825   GO:0046872   GO:0005344   GO:0020037   GO:0005833   GO:0005576   GO:0005506   GO:0007098   GO:0005813   GO:0043565   GO:0003824   GO:0008152   GO:0004588   GO:0006221   GO:0006402  

PANTHER

PTHR34343  

Length:

173

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01056

Exp number, first 60 AAs:

0.00141

Total prob of N-in:

0.09994

outside

1  -  173

 

 

Pi

195.938269

Theta

149.652321

Tajima's D

0.739738

CLR

0.384703

CSRT

0.592120393980301

Interpretation

Uncertain