Gene

KWMTBOMO10194  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005589

Annotation

PREDICTED:_protein_Gawky_[Papilio_xuthus]

Location

Bomo_Chr17(+):4202103-4220193      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.908

CDS

ATGCTAGTTTGTATTATACAACATGAGTCTTGTGAGATGCAACTACTGAATGATAAGTCTGCTCATGATATAATGTGCAAAACGAAAACTCGAATGATCAGTGACACAGAAATGTCTCTGAGAACGCACCATGACAATAATGTATCGAAACTTCATGATGAATTGGCCCTTGTGCCACACGTAAAGACATTTACAAATGGTGATCTCACCTTTGAAGCTATGATAGAATTAGCAAATAACGAGAAGAAAATTATAAATACTATGAAAAGCTCAGATCTGGATAGTTGGGGGAACCCATATCGTCTTAGGCTTTGTGGTGGAGGTGAAAGTTCCCTTAATGCTGGCAGTGGCTGGGGTAGTCCTCCAACAGCCAATAATAATGCTGGTAACTGGGGTGGTAGCACCAGTGGTCAAACAAATAACGGAACAAACAATACTCAGCAATGGAATAATACAGCTCAACGTCCGCCTACTTCTCAAGCTGATTTGAACAGCAACAAGGGCAATGGAAACCAATTGCCACCAACCAGTGCTGCATCTGCACAAAATTGGCAAAATTCTCCACCAAACCTGCCGAATTCACAACCTAACAATAATGGAGCACCTGCTAGTAATGGTACAAATAATACAACTAATGGAAATAATGGAATTAATAATGCTAATGGGGGTGTGAATGGTTCAGCTGCTGGCAATGGGACCAATGGTAACAACAACAGCACTTCATCAGCCAAAATTGAACAGTTAAATTCAATGAGAGAGGCATTATTTAGTCAAGACGGTTGGGGAGGTCAACATGTTAATCAAGACACTAATTGGGATGTCCCCGGTTCACCTGAACCCGGTGCAAAAGTTGAACCGACAGCAGCAGGAGGACCTCCTGCATGGAAACCCAATGTTAATAATGGTGCTTTCCTTGGAACTGATCTGTGGGAAGCTAATTTGAGAAATGGTGGACAACCACCTCCACAACCCGCTTCTAAGACACCTTGGGGTCATACTCCGACGACTAATATTGGTGGCACCTGGGGAGAAGATGATGATGTTTCTGATTCTGCTAATGTGTGGACTGGGCCTCCACCACCACAACAGTGGCCAGCTGGTCCACCACAACATTCTCAGCAATGGGGCATGCCAAAGAAAGATGATTGGAATGCTTGGGGTGAACCTCATAGAGGAGCAGATCCAAGATTGGATCCACACAGAGGCTCCGACCCTCGGCAGCAGCCCGTGGATCCTCGTCATGATCTGCGTGGTGGTATTTCGGGTAGACTCAACACTGATATGTGGAGCCAGCATCAACATACAGGACCGAGCAAGATGATGCCAGGCAGTGGTGTCAGTCAATGGGGAACACAGGGACCAAAGGACTCTATCAAATCGAGTGGATGGGAAGAACCTTCGCCACCAGCGGTGCGGCGCACTGGCAGTGGATTTGATGACGGTACGGCGTTGTGGGCTCAACGAACTGGAATGAGTATGGGTCGTGGAGGCCCACAGGGACCGCCCACCCAGTCTCGGATACCGCCTACGCCCACTAAACCTGATGCGGTGTGGGGCTCTCACTCTCAGCGAAATGGTTCTTGGGAAGAGCCGCACGCTCCGGCGTGGCCCGACCGAGATGGGCCAGCTTGGCCGGATGCATCTGGCCCGGGATTATGGCCCGTGCCCAAACCGAAACCGTCCGGCCCTGCAGGTGGCTGGCCTGACGATATTGGAGAGTGGGGTGGGCCCAAACCACCTCAAGGGTCCCTAGCCAAACAGCTTCCAAAAGAAGTCATTTGGAATAGCAAGCAATTCAGATTTCTGGTGGAAATGGGTTTTAAAAAGGAAGAGGCAGAAGTAGCCTTGCGTAGTCGCGACATGAACGCTGAAGAAGCGCTAGAACTGTTAGCAGGCGCACGAGGTGATGGTTGGCGACGCGATGAACATTTTCATCCTGGAGGTGGATTTCAACCTCCTTCCGTTCCCGCGGTATCGCCTGCTGTTGTACAGAAACTGCTCAACCAACCTCCACCGCAGCCAGTGCACCATCAACAATATCCCACCAGTGGTACGGGTAATAGTGGGCAGCCAAGTGCTGCTCAGCTCCGCATGCTAGTCCAACAAATACAAATGGCTGTCTCTGCTGGCTACCTCAATCATCAAATATTGAATCAACCACTGGCGCCTCAAACCCTCGTTTTACTAAACCAACTTCTACAACAGATAAAAGTACTTCAGCAGCTTTTACAGCAAAACTCATTGGCTATGGCGAAAGGGCACTCTTCAGTAGCCCTACAATACTCTGTACAAATTACTAAAGCGAAGCAGCAGATAACTGGGCTACAAAACCAAATAGCAACACAGCAAGCGTTGTACATGAAGCAGCAAAGTGGAGGCGCAGACTTGTTCAAGCAGGGTCATGACCCACTTGGTCCATTACAGAGCAATTTTAATGAAATATCCATCACGAAAGATACACAACCGTCTTTTGGTGGAAGTGGAAATCAGCAGTCTCGCCTAACTCAGTGGAAGTTGCCTTCTCTTGACAAGGAAGGTGAAGGCTCGGAATTTAGCCGTGCCCCCGGTACTGCCAAGTCTGCTACAAGTCCTCAACTTAACCAGCTAGGATTGCAGCCTGATTCGACATGGGGAGTAGGTCGTGGCTCTGAGGGCTGGGGCGACACTACTTCTGATGTGGCCGACGGAAAAGATTGGCCCACCCATACGTCCCACCAGCCTGTCTTTGATCTTGTACCTGAGTTTGAACCTGGAAAACCTTGGAAGGGTAATCAGATGAAGAGCGTCGAAGAAGACCCTGCGATGACACCCGGTTCAGTCGTCCGATCACCATTGTCGCTGACTGCCATCAAGGATACCGACATGCTAGGAGGCAAGAGTTCCCCGCCCGGCGCTGAGCGCAGCCTCTCCTCGTCTACGTGGAGCTACGCGCCGAGCGCTGCCGCCGGCAAGGACGCGTGGGCCGGCAAGCCTCGCGCCGCACCGCCCGGTCTGAACAAGCCGTGGCCCCAGCCGCGCCATCCGATCCCGTCTTGGCAGGCTTCCACTTGGCTCCTTCTCAAGAACCTCACAGCTCAGATTGATGGTTCCACACTCAAGACCCTGTGCGTGCAGCATGGACCTCTTCTGAACTTTCACTTGTACTTAAACCAGGGGTTGGCTTTAGCTCGCTATTCCACTCGCGAAGAAGCTGCCAAGGCTCAGATGGCACTGAACAATTGCGTGTTGTCTAACACGACGATATTCGCGGAGTCTCCCGCGGAGTCGGAGGTGCAGCTGATCCTGCAGCACCTGGGTTCGGGCGGCGGCGGTGCCTGGCGCGGCGGCGGTCAGACCAAGGAATGGGCAGGGTACAACTCGCTGTGGCCCGACCAGCACGACCAGCGGGCGACGCCCTCCAGCCTCAACTCGTTCCTGCCGCCGGACCTGCTCGGCGGAGAGTCCATCTAA

Protein

MLVCIIQHESCEMQLLNDKSAHDIMCKTKTRMISDTEMSLRTHHDNNVSKLHDELALVPHVKTFTNGDLTFEAMIELANNEKKIINTMKSSDLDSWGNPYRLRLCGGGESSLNAGSGWGSPPTANNNAGNWGGSTSGQTNNGTNNTQQWNNTAQRPPTSQADLNSNKGNGNQLPPTSAASAQNWQNSPPNLPNSQPNNNGAPASNGTNNTTNGNNGINNANGGVNGSAAGNGTNGNNNSTSSAKIEQLNSMREALFSQDGWGGQHVNQDTNWDVPGSPEPGAKVEPTAAGGPPAWKPNVNNGAFLGTDLWEANLRNGGQPPPQPASKTPWGHTPTTNIGGTWGEDDDVSDSANVWTGPPPPQQWPAGPPQHSQQWGMPKKDDWNAWGEPHRGADPRLDPHRGSDPRQQPVDPRHDLRGGISGRLNTDMWSQHQHTGPSKMMPGSGVSQWGTQGPKDSIKSSGWEEPSPPAVRRTGSGFDDGTALWAQRTGMSMGRGGPQGPPTQSRIPPTPTKPDAVWGSHSQRNGSWEEPHAPAWPDRDGPAWPDASGPGLWPVPKPKPSGPAGGWPDDIGEWGGPKPPQGSLAKQLPKEVIWNSKQFRFLVEMGFKKEEAEVALRSRDMNAEEALELLAGARGDGWRRDEHFHPGGGFQPPSVPAVSPAVVQKLLNQPPPQPVHHQQYPTSGTGNSGQPSAAQLRMLVQQIQMAVSAGYLNHQILNQPLAPQTLVLLNQLLQQIKVLQQLLQQNSLAMAKGHSSVALQYSVQITKAKQQITGLQNQIATQQALYMKQQSGGADLFKQGHDPLGPLQSNFNEISITKDTQPSFGGSGNQQSRLTQWKLPSLDKEGEGSEFSRAPGTAKSATSPQLNQLGLQPDSTWGVGRGSEGWGDTTSDVADGKDWPTHTSHQPVFDLVPEFEPGKPWKGNQMKSVEEDPAMTPGSVVRSPLSLTAIKDTDMLGGKSSPPGAERSLSSSTWSYAPSAAAGKDAWAGKPRAAPPGLNKPWPQPRHPIPSWQASTWLLLKNLTAQIDGSTLKTLCVQHGPLLNFHLYLNQGLALARYSTREEAAKAQMALNNCVLSNTTIFAESPAESEVQLILQHLGSGGGGAWRGGGQTKEWAGYNSLWPDQHDQRATPSSLNSFLPPDLLGGESI

Uniprot

H9J7U7   A0A2H1WL85   A0A2A4JIM0   A0A194QGV9   A0A3S2PD89   A0A194QTB8   + More
A0A212F1R2   A0A0L7LS64   A0A1Y1L2T3   A0A026WZP9   A0A1Y1KWW3   A0A3L8D2Z5   E2BXV2   F4WH23   A0A195EV01   A0A1L8DDF8   E9INX2   A0A195BUR5   A0A1L8DD30   A0A195E3D3   A0A151WZJ1   E2A5A4   A0A2D1QUL9   A0A1B6MBX1   A0A1B6L7N2   A0A154PP42   V9IG17   A0A1B6DB77   A0A1B6JSU7   A0A2S2QUT8   A0A1Y1KX06   A0A1Y1KWZ9   A0A146KKT5   A0A0M9A006   V5I899   Q172C8   A0A158NTB7   E0VSP6   A0A1L8DBL3   A0A182GW21   A0A1L8DBI2   A0A310SGQ2   A0A336KFR3   A0A336LYR7   Q172C7   A0A1Q3FAP1   A0A0P6K143   A0A1Q3FAE7   A0A2S2RA09   A0A0A9WXW6   A0A0A9WQE3   A0A0A9WE62   A0A0A9Y428  

Pubmed

19121390    26354079    22118469    26227816    28004739    24508170    + More
30249741    20798317    21719571    21282665    26823975    17510324    21347285    20566863    26483478    26999592    25401762   

EMBL

BABH01020113    BABH01020114    ODYU01009425    SOQ53841.1    NWSH01001429    PCG71252.1    + More
KQ459232    KPJ02681.1    RSAL01000090    RVE48055.1    KQ461155    KPJ08250.1    AGBW02010829    OWR47672.1    JTDY01000201    KOB78318.1    GEZM01071301    GEZM01071297    JAV65896.1    KK107061    EZA61318.1    GEZM01071302    GEZM01071299    JAV65889.1    QOIP01000014    RLU14760.1    GL451314    EFN79509.1    GL888148    EGI66502.1    KQ981954    KYN32090.1    GFDF01009714    JAV04370.1    GL764397    EFZ17765.1    KQ976409    KYM90936.1    GFDF01009713    JAV04371.1    KQ979701    KYN19586.1    KQ982636    KYQ53320.1    GL436894    EFN71385.1    KY285068    ATP16171.1    GEBQ01006560    JAT33417.1    GEBQ01020248    GEBQ01009088    JAT19729.1    JAT30889.1    KQ434996    KZC13224.1    JR045641    AEY60020.1    GEDC01014443    JAS22855.1    GECU01005435    JAT02272.1    GGMS01012302    MBY81505.1    GEZM01071300    JAV65892.1    GEZM01071298    JAV65894.1    GDHC01021428    JAP97200.1    KQ435784    KOX74580.1    GALX01005055    JAB63411.1    CH477441    EAT40858.2    ADTU01025736    ADTU01025737    DS235755    EEB16402.1    GFDF01010262    JAV03822.1    JXUM01092344    KQ563981    KXJ72981.1    GFDF01010261    JAV03823.1    KQ761343    OAD57857.1    UFQS01000315    UFQT01000315    SSX02752.1    SSX23124.1    SSX02753.1    SSX23125.1    EAT40859.1    GFDL01010482    JAV24563.1    GDUN01000151    JAN95768.1    GFDL01010504    JAV24541.1    GGMS01017307    MBY86510.1    GBHO01033939    JAG09665.1    GBHO01033988    JAG09616.1    GBHO01036857    JAG06747.1    GBHO01017736    JAG25868.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000053240    UP000007151    + More
UP000037510    UP000053097    UP000279307    UP000008237    UP000007755    UP000078541    UP000078540    UP000078492    UP000075809    UP000000311    UP000076502    UP000053105    UP000008820    UP000005205    UP000009046    UP000069940    UP000249989   

PRIDE

H9J7U7   

Pfam

PF16608   TNRC6-PABC_bdg        + More
PF12938   M_domain
PF00627   UBA
PF00076   RRM_1

Interpro

IPR035979   RBD_domain_sf        + More
IPR032226   TNRC6_PABC-bd       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR026805   GW182_M_dom       
IPR033503   GW182       
IPR015940   UBA       
IPR009060   UBA-like_sf       
IPR041971   Gawky_UBA       
IPR000504   RRM_dom       

SUPFAM

SSF54928   SSF54928        + More
SSF46934   SSF46934       

Gene 3D

3.30.70.330    

CDD

cd14284  UBA_GAWKY

ProteinModelPortal

H9J7U7   A0A2H1WL85   A0A2A4JIM0   A0A194QGV9   A0A3S2PD89   A0A194QTB8   + More
A0A212F1R2   A0A0L7LS64   A0A1Y1L2T3   A0A026WZP9   A0A1Y1KWW3   A0A3L8D2Z5   E2BXV2   F4WH23   A0A195EV01   A0A1L8DDF8   E9INX2   A0A195BUR5   A0A1L8DD30   A0A195E3D3   A0A151WZJ1   E2A5A4   A0A2D1QUL9   A0A1B6MBX1   A0A1B6L7N2   A0A154PP42   V9IG17   A0A1B6DB77   A0A1B6JSU7   A0A2S2QUT8   A0A1Y1KX06   A0A1Y1KWZ9   A0A146KKT5   A0A0M9A006   V5I899   Q172C8   A0A158NTB7   E0VSP6   A0A1L8DBL3   A0A182GW21   A0A1L8DBI2   A0A310SGQ2   A0A336KFR3   A0A336LYR7   Q172C7   A0A1Q3FAP1   A0A0P6K143   A0A1Q3FAE7   A0A2S2RA09   A0A0A9WXW6   A0A0A9WQE3   A0A0A9WE62   A0A0A9Y428  

PDB

2WBR     E-value=2.98816e-32,     Score=351

KEGG

101739809    K18412 trinucleotide repeat-containing gene 6 protein | (RefSeq) protein Gawky

GO

GO:0035278   GO:0003676   GO:0003723   GO:0016021   GO:0005515   GO:0000166   GO:0043565   GO:0003824   GO:0008152   GO:0004588   GO:0006221   GO:0006402   GO:0046872  

PANTHER

PTHR13020:SF25  

Length:

1149

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00215

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00000

outside

1  -  1149

 

 

Pi

185.373162

Theta

179.626837

Tajima's D

-0.994787

CLR

0.569452

CSRT

0.137543122843858

Interpretation

Uncertain