Gene

KWMTBOMO10193

Pre Gene Modal

BGIBMGA005613

Annotation

PREDICTED:_transmembrane_protein_104_homolog_[Bombyx_mori]

Location

Bomo_Chr17(-):4190709-4198932      View in EpiBrowser

Full name

Transmembrane protein 104 homolog      

Location in the cell

PlasmaMembrane   Reliability : 4.964

CDS

ATGCCTATAACTGAGACTGGGGATCAATATTCGATATGGGTGGGCTTAATATATATATTCAATTTGATTGTTGGGACTGGCGCTCTGACATTACCTGCAGCATTTTCCAGGGCAGGATGGGCATTAAGCACAATATCATTAGTCTTCTTAGCATTTATGAGTTTCTTGAATGCAACTTATGTGATAGAAACTATGGCATGCGCCAATGCAGTGCTAAAATGGAAGAAACTGCAGTCTATTAAGAGAGAGAGTATCCAAGATAGGGATACTGATGAAGAGACTACCTCACAACAATATGGAGATCTCGAAGAACCCCTTGTTTGTGGTACTTCCATACCTTCAAGATACTACAGTCTGGACCAACGTGTGGAACTTGGAGAAATGGCAAACCTTTTTTTTAGCAAGACTGGAAGGTTGATGTTTTATTGCACTCTCTGTGTATATCTGTATGGAGACCTATCGATATATTCAGCTGCAGTTGCTAAGTCCGTTATGGATGTTGTATGTTCAACAGTCTCTTCGAATGTCACGAACGGCAGAGGTTGGGAGAGCTTGCCGTGTTTCAACGCAACCGATGATCCGATGGCGTACACTCGACTCGATGTGTATAGGGTCTCTCTGCTCACCTTCGTAGCGGTCATGGGGCCCTTCGTCTTCTTCAACGTGCAGAAGACTAAGTACCTGCAGTTGCTGACGTCAGGAATGAGATGGCTCGCATTCACGATAATGATCTCAATGGCGATCCATCTGTTAACGTCCCGAGGGGCTGAAGGCAGACCTCCTACGTTTGACGTGACGGGAATGCCCACATTATTTGGAGCATGTGTGTATTCATTCATGTGCCACCACTCGTTGCCAGGACTCATCAGTCCGATACGAGGCAAGAACGGCTTGGGGCTCCATCTCTCTCTAGATTACGTTCTCATAAGCGTATTCTACCTGTTATTAGCGTTCACTGGCGCTTTCGCCTTTGCCGAACTAAACGATTTGTACACGTTAAATTTTGTGCCGTCGGACAATGAAAACATATTCCTTAAAATTGTCGATTATTTCCTTTCACTGTTCCCGGTTTTCACTCTGTCCACGAGTTTCCCGATTATAGCGATTACATTAAAGAACAATCTGCAGTCTCTATGTTTGGACACGGGTCGCATTGAAAGTTACAATGTTGTCGTTAGAAAATTTTTATTTCCCGTCGTTACGGTAGTTCCTCCGGTACTGTTGACGTATTATTTAGAGGATATCAGTGTGTTGATTGAGTTCACTGGTTCGTATGCGGGAGCCGGTATTCAATATTTGATACCGACGTTTCTCGTTGTGTCCGCCAGGCGGCACTGCGTCGCCCTGCTGGGTTTGGGCGTGGTCAATAAGTATAAGAGTCCGTTCTCGCATGCGGCGTGGGCAGTATTCGTCCTGCTCTGGTCGTGCATGTGTATAATATTGGTCTCCGTGCACATATTAGAAAAGAAATCATGA

Protein

MPITETGDQYSIWVGLIYIFNLIVGTGALTLPAAFSRAGWALSTISLVFLAFMSFLNATYVIETMACANAVLKWKKLQSIKRESIQDRDTDEETTSQQYGDLEEPLVCGTSIPSRYYSLDQRVELGEMANLFFSKTGRLMFYCTLCVYLYGDLSIYSAAVAKSVMDVVCSTVSSNVTNGRGWESLPCFNATDDPMAYTRLDVYRVSLLTFVAVMGPFVFFNVQKTKYLQLLTSGMRWLAFTIMISMAIHLLTSRGAEGRPPTFDVTGMPTLFGACVYSFMCHHSLPGLISPIRGKNGLGLHLSLDYVLISVFYLLLAFTGAFAFAELNDLYTLNFVPSDNENIFLKIVDYFLSLFPVFTLSTSFPIIAITLKNNLQSLCLDTGRIESYNVVVRKFLFPVVTVVPPVLLTYYLEDISVLIEFTGSYAGAGIQYLIPTFLVVSARRHCVALLGLGVVNKYKSPFSHAAWAVFVLLWSCMCIILVSVHILEKKS

Similarity

Belongs to the TMEM104 family.

Keywords

Complete proteome   Glycoprotein   Membrane   Reference proteome   Transmembrane   Transmembrane helix  

Feature

chain  Transmembrane protein 104 homolog

Uniprot

H9J7X1   A0A2H1WLN8   A0A2A4JI46   A0A194QCH0   A0A212F1T6   A0A2Z5U7P0   + More
A0A194QXF0   A0A023ETA1   A0A182HDD4   A0A0L7QNB3   M9PD31   Q9VPF8   A0A182VRF4   A0A182K4B4   A0A182XW16   A0A151JNK6   Q0IGE5   A0A158NV73   E2BJ04   A0A182S9U9   U5EYG0   B4QRZ2   B4PF84   A0A151K1G9   B4IUG2   A0A182PE15   B0XHE2   F4WEV8   A0A182LUY9   A0A1W4W6T7   A0A182HZW7   B3NIL8   E2AFQ6   B4IAA6   A0A182XGF9   A0A182VBV0   Q7PYT6   A0A182TSD9   K7J5G5   A0A1Q3F561   A0A026WMZ1   A0A182QB65   A0A195CUP9   A0A232FLP5   A0A182N6B4   A0A151X9U8   A0A182RT66   A0A087ZZF4   A0A182IMK4   B3M995   W5J5W2   A0A2M4APJ0   A0A182F7Z8   A0A2A3EM52   A0A2M4BK33   B0XHE4   A0A2M4BK58   A0A3B0JZ43   Q2LYK0   B4HBU6   D6WGR5   A0A1Y1N8E0   T1P912   A0A1I8MY39   A0A1I8MY26   A0A1I8NQ41   A0A1I8NQ37   A0A0L0CDM1   A0A067RWK9   B4MXR5   B4MF29   A0A310SAC3   D0Z7D1   A0A0T6BCW2   A0A2J7PLX5   J3JZF2   N6TNU0   A0A1S3HNE6   A0A131Y596   A0A1W4WYM3   A0A1L8DEM4   A0A3Q2XM93   A0A3B5QMX8   A0A1S3HPU1   A0A3Q3K974   A0A3Q4GUL4   A0A2U9CTF6   A0A3Q1J7M4   A0A3P8QIT1   A0A3P9ATD4   A0A3P9L8U3   A0A3Q2XA18   A0A3B4FSQ3   A0A3Q3MP50   A0A3B3C558   A0A3P9HL30   A0A3B4VMT7   I3JSZ8   H2L5J0   A0A3B3VP50  

Pubmed

19121390    26354079    22118469    24945155    26483478    10731132    + More
12537568    12537572    12537573    12537574    16110336    17569856    17569867    12537569    25244985    17510324    21347285    20798317    17994087    22936249    17550304    21719571    12364791    14747013    17210077    20075255    24508170    30249741    28648823    20920257    23761445    15632085    18362917    19820115    28004739    25315136    26108605    24845553    22516182    23537049    23542700    25186727    17554307    29451363   

EMBL

BABH01020114    BABH01020115    ODYU01009425    SOQ53842.1    NWSH01001429    PCG71254.1    + More
KQ459232    KPJ02680.1    AGBW02010829    OWR47673.1    AP017548    BBB06958.1    KQ461155    KPJ08251.1    GAPW01001075    JAC12523.1    JXUM01001649    JXUM01001650    KQ414855    KOC60132.1    AE014296    AGB94802.1    AY118576    KQ978820    KYN28145.1    CH477192    EAT48593.1    ADTU01026935    GL448543    EFN84349.1    GANO01000380    JAB59491.1    CM000363    CM002912    EDX11238.1    KMZ00785.1    CM000159    EDW95170.1    KQ981189    KYN45236.1    CH891902    EDX00026.1    DS233146    EDS28355.1    GL888111    EGI67275.1    AXCM01003940    APCN01002017    CH954178    EDV52514.1    GL439124    EFN67735.1    CH480826    EDW44219.1    AAAB01008987    EAA01001.5    GFDL01012437    JAV22608.1    KK107167    QOIP01000010    EZA56474.1    RLU17999.1    AXCN02000281    KQ977279    KYN04385.1    NNAY01000065    OXU31378.1    KQ982365    KYQ57142.1    CH902618    EDV40079.2    ADMH02002036    ETN59832.1    GGFK01009368    MBW42689.1    KZ288212    PBC32798.1    GGFJ01004295    MBW53436.1    EDS28357.1    GGFJ01004296    MBW53437.1    OUUW01000012    SPP87347.1    CH379069    EAL29862.1    CH479267    EDW39540.1    KQ971327    EEZ99619.1    GEZM01010252    JAV94123.1    KA645187    AFP59816.1    JRES01000536    KNC30312.1    KK852421    KDR24294.1    CH963876    EDW76834.1    CH940665    EDW71130.2    KQ779356    OAD51991.1    CM000831    ACY70515.1    LJIG01001748    KRT85192.1    NEVH01024423    PNF17331.1    BT128634    AEE63591.1    APGK01057450    APGK01057451    KB741280    KB632033    ENN70910.1    ERL88214.1    GEFM01002134    JAP73662.1    GFDF01009196    JAV04888.1    CP026261    AWP19403.1    AERX01008320    AERX01008321    AERX01008322    AERX01008323   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000069940    + More
UP000053825    UP000000803    UP000075920    UP000075881    UP000076408    UP000078492    UP000008820    UP000005205    UP000008237    UP000075901    UP000000304    UP000002282    UP000078541    UP000075885    UP000002320    UP000007755    UP000075883    UP000192221    UP000075840    UP000008711    UP000000311    UP000001292    UP000076407    UP000075903    UP000007062    UP000075902    UP000002358    UP000053097    UP000279307    UP000075886    UP000078542    UP000215335    UP000075884    UP000075809    UP000075900    UP000005203    UP000075880    UP000007801    UP000000673    UP000069272    UP000242457    UP000268350    UP000001819    UP000008744    UP000007266    UP000095301    UP000095300    UP000037069    UP000027135    UP000007798    UP000008792    UP000235965    UP000019118    UP000030742    UP000085678    UP000192223    UP000264820    UP000002852    UP000261600    UP000261580    UP000246464    UP000265040    UP000265100    UP000265160    UP000265180    UP000264840    UP000261460    UP000261640    UP000261560    UP000265200    UP000261420    UP000005207    UP000001038    UP000261500   

PRIDE

H9J7X1    M9PD31    Q9VPF8   

Pfam

PF01490   Aa_trans

Interpro

IPR013057   AA_transpt_TM       

ProteinModelPortal

H9J7X1   A0A2H1WLN8   A0A2A4JI46   A0A194QCH0   A0A212F1T6   A0A2Z5U7P0   + More
A0A194QXF0   A0A023ETA1   A0A182HDD4   A0A0L7QNB3   M9PD31   Q9VPF8   A0A182VRF4   A0A182K4B4   A0A182XW16   A0A151JNK6   Q0IGE5   A0A158NV73   E2BJ04   A0A182S9U9   U5EYG0   B4QRZ2   B4PF84   A0A151K1G9   B4IUG2   A0A182PE15   B0XHE2   F4WEV8   A0A182LUY9   A0A1W4W6T7   A0A182HZW7   B3NIL8   E2AFQ6   B4IAA6   A0A182XGF9   A0A182VBV0   Q7PYT6   A0A182TSD9   K7J5G5   A0A1Q3F561   A0A026WMZ1   A0A182QB65   A0A195CUP9   A0A232FLP5   A0A182N6B4   A0A151X9U8   A0A182RT66   A0A087ZZF4   A0A182IMK4   B3M995   W5J5W2   A0A2M4APJ0   A0A182F7Z8   A0A2A3EM52   A0A2M4BK33   B0XHE4   A0A2M4BK58   A0A3B0JZ43   Q2LYK0   B4HBU6   D6WGR5   A0A1Y1N8E0   T1P912   A0A1I8MY39   A0A1I8MY26   A0A1I8NQ41   A0A1I8NQ37   A0A0L0CDM1   A0A067RWK9   B4MXR5   B4MF29   A0A310SAC3   D0Z7D1   A0A0T6BCW2   A0A2J7PLX5   J3JZF2   N6TNU0   A0A1S3HNE6   A0A131Y596   A0A1W4WYM3   A0A1L8DEM4   A0A3Q2XM93   A0A3B5QMX8   A0A1S3HPU1   A0A3Q3K974   A0A3Q4GUL4   A0A2U9CTF6   A0A3Q1J7M4   A0A3P8QIT1   A0A3P9ATD4   A0A3P9L8U3   A0A3Q2XA18   A0A3B4FSQ3   A0A3Q3MP50   A0A3B3C558   A0A3P9HL30   A0A3B4VMT7   I3JSZ8   H2L5J0   A0A3B3VP50  

KEGG

101739207    no KO assigned | (RefSeq) transmembrane protein 104 homolog

GO

GO:0016021  

Subcellular location

Membrane  

Length:

491

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

233.71686

Exp number, first 60 AAs:

41.65455

Total prob of N-in:

0.99898

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  49

TMhelix

50  -  72

inside

73  -  138

TMhelix

139  -  161

outside

162  -  199

TMhelix

200  -  222

inside

223  -  234

TMhelix

235  -  252

outside

253  -  266

TMhelix

267  -  289

inside

290  -  301

TMhelix

302  -  324

outside

325  -  346

TMhelix

347  -  369

inside

370  -  389

TMhelix

390  -  412

outside

413  -  464

TMhelix

465  -  487

inside

488  -  491

 

 

Pi

241.297962

Theta

144.312789

Tajima's D

1.000301

CLR

0.163202

CSRT

0.658767061646918

Interpretation

Uncertain