Pre Gene Modal
BGIBMGA005587
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_E2/E3_hybrid_ubiquitin-protein_ligase_UBE2O_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.874
Sequence
CDS
ATGGCGGGGCAAAATCCAGGATCACCGACCGACTTTCAATATTTTTATGAAGATGAAGTTTATAAAATCAACAACCGGGGCCAAGTGGTTTTCGGCCTAGTGCTCGAGAACTATGAAGCTAACTCCAGTGACCAAGAGAGCGACATTGAAACACCTATACAAAAAGGAGAAATTCGTGTTGTATGGCATCCTTCCGGCACAGAACGCGTTATATCTGAGAAATCGGTGGGTCTGGCAGACAGGTCCCTTATGCCAGGTGATGTGGTTCGTCGCCTCATCGCTGGCAAGGATACCCAGAGGGGATATTGCCGCGACATTGTAATGACGGCCGCCTTGCAGATCGTGGGCACGAAACACGTGATCCCCAGTGTAGCAAGTGAAAGACTTCAGCCTCTTGAAGAATTTTCCCCTGATTTAGCAGTTTGTCTTGATTCATGGGTTGGCACTTCTAAGGCCGTCCACAGTAAACTACGTTTAGTATCCTCCGATGGATCACGTCTCGAGTATTCAGACCTAGACACGTGCCCTCTCGAGGACTACTCCATGCGACGTCGACGCTCCACGCCGTACTCTTCGTCTGAATATTATCCTGGACAAGTGGTTTACGGGCCTCTGGGTTCTTTGGATAACGCCAACTGGTTGCACATGACTAAGGAAATGAAGGCTGCTAGAAAACATAAGATGCATGATCATAAGTTTACTGTGGAAGCGGTTGTCACGGAGAGTGTGAGTGTGCACTGGCAGTGTCGTGCCCTTTGTACTCATCCAACAGAGACTGGAGCTCCTCAACAACCGAAGTTCTTCGTGGAAGGAGACGACCTGAAAAACTTGAAATTGCTAAATGTGTTCGAGCCGTGTACATTACAAGTAGGAGACCGAAACTTCCTGACAATTACCACAGAAGATACATTTGTTGGTAAAAAGCAATGGAGGAAACAGCAGAGTAAAATCTACAGGAACCAACGTAAACAGACTCGTCCAGTAAAGAAATCGTCCAAATCGGAAACTAATTCTAGTGAACACGTGCCTTCGCGGCCCAAGAAACGAGCCTCATCGCACAGGAAACTGAAGCCTGCCGATAATGAAATGGAAGTAGACATGACGGAGGAGAAACTTGAAAACTTAGACGAGGTCCTCAAGGCGGACCCGAGCTGTCCCAGCATCAAGATAGAGCCCATCGGCGACGTCTCACTACCCATGGCCAGCAGTCAAGAAGACACTGCTACCGAGGAGAAGAACGACTCTGGAATAAGTGGGCTAAGTAAATCCCACGTCCGCAGCCCGGAGCCGGCCAAGGAGCACGGCTCGCTGCTGAACGGCGACAGCAAGTCCGACGTGGCCCTCAACGATGATGACTCCGAGAACTGGGAGAACACCAGCAGCGACGGCAGCGATACGGACAGCGGCGCCACGTGGTCGTCTCGCTGCTCGTCCGCGGCGTCGCGCGGCGGCAAGCGCTCCCCGCAGCTGGCGGTGCGGCTGCTGCGCGGCAAGCGGCTCAAGCGGACCGTGCGGCGCGCGCCCCCCGCCCCGCCCCCGAAGCACAACGACCGCGTCGTCGTGGAGACGCTGCACACCACCAGCCGGGCCAACGTCGTCTGGCAGGATGGTACAATTGAAATGGGCATTCCTTCGACTCAGCTGTACCCTATCCACCACCTCGATGGCCAGGAGTGTTTCCCGGGAGACTTCGTAGTTAGTGGCGCCGCTAACATCGAGGAGAACCAACAGCTAAAACACCGAGAGTACGGCGTGGTCCAGCGCGTGGACCACCACGGCCGCACTGCCATCGTGCACTGGTACCGCACGTACACGAGCGCTGACGAACCTGTTCCACAAATGCTGTACGAGAGTGAAGTGAGCGTGTACGACTTGAAGGACCATCCGGACTTCCAGTACCGGCCCGGGACCGTGGTCATACGCGTCGCCAACTTCACCGGGGAAGACGCCAACTGCACTGCGGGACAGGTCATTGATAACTTTCCTACTGGTCGAGTGAAGGTGTGGTGGGTCGATGGTCACATCAGCATGTGCTGGCCACAGGATCTATACAAGGTGGGCGAATACGATTCGGAGGAGGGCGAACTGTGGGGCTCTGAGGGATCCGCCTCCGAGGACTCCTGGGAGACGCAGAGCTCACATGCTGAACACGAGCCACGCACTCCGGATGTCACACCTATACTTCCGAAAGTGGAGAATCAGCAGGTTCCCGCCGTAGAGAGTACGTCGAGTGGTCTAACGATACCGAGGCTACTGGAACCACGCGTCGCCGCTCACATCGAGAGGGGACGAGTAGCCATGAGGAGACTGGAGGAGATGTTCGCCAAACATCCTGCGCTTCAAACACAGGAGATAATGAGAAAACTGCTCAATTTGTATAAGGACTGTCGATTCTTGGATCGCTTGATGGGTACTACTTTCTTCCATGAAGATCATTTCTTGGTAATTAATGTTCGCCTTTAG
Protein
MAGQNPGSPTDFQYFYEDEVYKINNRGQVVFGLVLENYEANSSDQESDIETPIQKGEIRVVWHPSGTERVISEKSVGLADRSLMPGDVVRRLIAGKDTQRGYCRDIVMTAALQIVGTKHVIPSVASERLQPLEEFSPDLAVCLDSWVGTSKAVHSKLRLVSSDGSRLEYSDLDTCPLEDYSMRRRRSTPYSSSEYYPGQVVYGPLGSLDNANWLHMTKEMKAARKHKMHDHKFTVEAVVTESVSVHWQCRALCTHPTETGAPQQPKFFVEGDDLKNLKLLNVFEPCTLQVGDRNFLTITTEDTFVGKKQWRKQQSKIYRNQRKQTRPVKKSSKSETNSSEHVPSRPKKRASSHRKLKPADNEMEVDMTEEKLENLDEVLKADPSCPSIKIEPIGDVSLPMASSQEDTATEEKNDSGISGLSKSHVRSPEPAKEHGSLLNGDSKSDVALNDDDSENWENTSSDGSDTDSGATWSSRCSSAASRGGKRSPQLAVRLLRGKRLKRTVRRAPPAPPPKHNDRVVVETLHTTSRANVVWQDGTIEMGIPSTQLYPIHHLDGQECFPGDFVVSGAANIEENQQLKHREYGVVQRVDHHGRTAIVHWYRTYTSADEPVPQMLYESEVSVYDLKDHPDFQYRPGTVVIRVANFTGEDANCTAGQVIDNFPTGRVKVWWVDGHISMCWPQDLYKVGEYDSEEGELWGSEGSASEDSWETQSSHAEHEPRTPDVTPILPKVENQQVPAVESTSSGLTIPRLLEPRVAAHIERGRVAMRRLEEMFAKHPALQTQEIMRKLLNLYKDCRFLDRLMGTTFFHEDHFLVINVRL
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF00179 UQ_con
SUPFAM
SSF54495
SSF54495
Gene 3D
CDD
ProteinModelPortal
Ontologies
GO
Topology
Length:
820
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00362
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00017
outside
1 - 820
Population Genetic Test Statistics
Pi
221.597209
Theta
180.046488
Tajima's D
0.704349
CLR
0.137136
CSRT
0.572721363931803
Interpretation
Uncertain
