SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10185
Pre Gene Modal
BGIBMGA005617
Annotation
PREDICTED:_uncharacterized_protein_LOC106119066_isoform_X1_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 2.847
 

Sequence

CDS
ATGAACAGGCTACATATGGCTCGGTCAACGGTGGCGTTGTTCATTGTGGCGTTCTTGACGTTGTTCATTGCTTTCTGGACGGGCGTCGTCGGCTGCTGGAAGCGCAGTCCCGGCAACATCACCGCCACCGCTATACTGATGCTCGTCACATGTCTGCTGTCGGCGGGCGCTATGGCACTGTGGCACGGGGTTGAGTTTTATGAAAAAGAGAAGGTTGTAGGAGAGGAGTTCTATCAACAATGGCCCAACATATTACGTGACAACTCTCGCGTTTGGTACGATTGGTCGTATATGGTGGCGTGGTGCGGCGTCGGACTGTCACTGCTGTCGGCCATCTTGTTTTCGTCGGCGGCCATTTGCTTACGCGGCGAGCGAGAGCGGGAGGAAGCGCTTAATATGCAGTACCTCATGCCGGTATACCCACAAAAGCAGCAGTACGCTTACGCCGGATACCCGCCGCCCGCGGCGTACCCCGGTCCCTACTACCACGGCTCGCAAAGGCACACCCTGTCCCGTATAGACGAGACGCCTCCCCAAACGCTGGCCCGACCTCGGTCCAAGAGTCTACAGCACTCTGCGGATGATTTCTCGTCGACGCGTCCGATGCTCCGGTCTCGCTCCAACGTGTCAGCGGACACGAGCAGGAGCGTGCCCGTCTGCAACCAAAGTCACGAGATTGGTAACCAGCTGGAGAGCAACAGCCCCCAGTACGCAGAGCCTAAAGACTCTGACTCGTCTTCGTACGAGCGGCCGGCTTCGATGACGGACCTGCCTATCATGGTACCCATCGACCAAGTGACCGGCGCCTACGTCCCCTACCCCCAATACTCGTACTATCACGACGAGGGTTGTAAGCTCAACCGTTTGAAAAGGAACAACAAGAAGTCTAAAAAGTCCCCAAAAAACAATGTTTACCTTGCATTCATGTACTGA
Protein
MNRLHMARSTVALFIVAFLTLFIAFWTGVVGCWKRSPGNITATAILMLVTCLLSAGAMALWHGVEFYEKEKVVGEEFYQQWPNILRDNSRVWYDWSYMVAWCGVGLSLLSAILFSSAAICLRGEREREEALNMQYLMPVYPQKQQYAYAGYPPPAAYPGPYYHGSQRHTLSRIDETPPQTLARPRSKSLQHSADDFSSTRPMLRSRSNVSADTSRSVPVCNQSHEIGNQLESNSPQYAEPKDSDSSSYERPASMTDLPIMVPIDQVTGAYVPYPQYSYYHDEGCKLNRLKRNNKKSKKSPKNNVYLAFMY

Summary

Uniprot
ProteinModelPortal

Ontologies

Topology

Length:
310
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
66.77315
Exp number, first 60 AAs:
42.12714
Total prob of N-in:
0.26274
POSSIBLE N-term signal
sequence
outside
1  -  9
TMhelix
10  -  32
inside
33  -  38
TMhelix
39  -  61
outside
62  -  96
TMhelix
97  -  119
inside
120  -  310
 
 

Population Genetic Test Statistics

Pi
211.991677
Theta
161.074358
Tajima's D
0.857076
CLR
0.029146
CSRT
0.617769111544423
Interpretation
Uncertain
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