Silkworm Genome Informatics Database

Gene

KWMTBOMO10180

Pre Gene Modal

BGIBMGA005622

Annotation

PREDICTED:_WD_repeat-containing_protein_81_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr17(-):3807636-3823117 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.531 Nuclear Reliability : 1.852

CDS

ATGAAGACGAAGGCTCAAGGATTTGTTCTACAACTCAACTGTGACCCGGCGGAGCTGAAGGAACGATTCTTGAAATCCATGAAACTACTTGACGAGTTTACATATCTCATAACAGACTTCAATCTAGCTACTGGCCAAATAGAAGACTTAGGCAGCTCAGAATACACACCAGTGCCTGATACAACACCGAAGTTACTTCCAACACCTCAATTACCAACGCTTAACTTATTAGATGCATTAAGTGAACCAACTCCTTCTACGTCACAAGCTAGCATGAAAGTGACCCACACGAAAAAACCTAAAAGATTAAAAAGCATTAAAGACGATCAAACATTGATCACATTCTCGAGTTCATCTTGCTCATCGGAAAGTGTTCCTTTAGTGAAGACTGAGGTTGTAAGCAAGGAAGTGCAGTGTGAAATTGTTTATGAATTGGAAAAGTTAGACATTGAAGATAATCAATCACAAGTATCCCAAGAATCCTGCAAGTTGCCAGCTCAGTCGATGTTAGAAGTTGATAATACCTACTCTGGGACAATCATGCACGTAGATGGATCTTCTTTTTGGATTATAACCGAAGACACTGATATAGTTTACAGATTAATGTTAGAAATGACAGAATATTATACTAAGAATTACAGGAAAATGAATCTAAAAGAAGTGAAAATATTAGCGTATTGTGCTGTGTACGATGGAGATTGTTATTATAGAGGGCTTTTTCTAAATTTGATTGAGGACGGTACGAACACTGCAGAGGTGTACATAGTGGACACGGGAGAGACGCGGTGCTTCCACATAGATAGTCTTCAGCCACTGGTATTGCAGTTCTGTGATTCGCCTCCGTATGCACGGTGCTGTCATTTAGCTGGGGTGGATCCAATTAACTATAACGATATGCATCTCGTCGAGAAACTTGAAGAGTGCATGAGAAATTACATAGGAACATTATGTAAAATTGAAATTGATGACAACTCGTCGGAGTCGCTCGGCGTGTACGTCATACTGCCGGACAACCAGACACTCAACCAAATAATCGTACAACAGGAATTTGCTAACGCCATCAACAGGCCAGTTTCTCCCGCGAAGCAAGCGCCCGCGGTCCACTGCCCGCCCGAGCTGGTGAACGACAGTTCCTTAGACATCACGCACTGTCCTGAATATGAGGACCCCGTTGAAGCAGTCACGGGTTATCACAATCGCGACGAAGCGGACATATGCAAACACTACAAAGGCGGTCCGAGCGCGACCTGCTTCAAAGGAGCGAAATGCAAAAAGAAACACATCGTCAAACATCCAGACGGTTGGACGCTCGACCGTGTGGAGGTGGTCGGTAAATGCAAGTCAATCCCTCTACCGGAGCCCGGCACCTGGCACAAGGTCCTGGTCACGTGCGTCTGTCACTACGACCGGGTCTACTTTCAGATCATCGATAACAAGGAACCGGAGCAGATACCTGATTTCGGTGTGGTGCTGCCCCCCGCGACGCTGGAGAGCCTCGTGCGTGACATGAATAGCCCCGCCGCGCGCATCACATATAAACCTTTGAAGCTAACCCCTGCTCCGGGAGAGATGGTGGCTGCATTGTACCCGCTGGACGACAACTGGTATCGAGCCAGAGTGCTCTCACTCACCCGACCCGACCAGAGCGTGGAGGTGATGTACGTAGACTACGGCACCGTTCTGTGGGTGAAGGAGGACCAGATCCGCCACCTGGAGGCCCGGTACACGTTCCTGCCGATGCAGGCGGTGCGGTGCGTGCTGGCGGGCGTGACGTGCCCGTCGCACGACTCGCAGCACTGGGCCGCCGCCAAGCGGGTGCTCGGCGAACTAACCCAGGACAAGCTGCTCGACGCCCATATCATATCTCGGGACTACGACGAAGTAGCAGTCGAATTGTTCAACAGCGACGGCTACAGCATCGCGGAGCAACTTGCAGCTCGAGACATGGTCGACCTGGTAGAATACTCTGTGGTCGACGACACGAAAACGCAATATGCGGGTTATATTGCAATGTCTAGACAGAACTCTGCAATAGGCTAG

Protein

MKTKAQGFVLQLNCDPAELKERFLKSMKLLDEFTYLITDFNLATGQIEDLGSSEYTPVPDTTPKLLPTPQLPTLNLLDALSEPTPSTSQASMKVTHTKKPKRLKSIKDDQTLITFSSSSCSSESVPLVKTEVVSKEVQCEIVYELEKLDIEDNQSQVSQESCKLPAQSMLEVDNTYSGTIMHVDGSSFWIITEDTDIVYRLMLEMTEYYTKNYRKMNLKEVKILAYCAVYDGDCYYRGLFLNLIEDGTNTAEVYIVDTGETRCFHIDSLQPLVLQFCDSPPYARCCHLAGVDPINYNDMHLVEKLEECMRNYIGTLCKIEIDDNSSESLGVYVILPDNQTLNQIIVQQEFANAINRPVSPAKQAPAVHCPPELVNDSSLDITHCPEYEDPVEAVTGYHNRDEADICKHYKGGPSATCFKGAKCKKKHIVKHPDGWTLDRVEVVGKCKSIPLPEPGTWHKVLVTCVCHYDRVYFQIIDNKEPEQIPDFGVVLPPATLESLVRDMNSPAARITYKPLKLTPAPGEMVAALYPLDDNWYRARVLSLTRPDQSVEVMYVDYGTVLWVKEDQIRHLEARYTFLPMQAVRCVLAGVTCPSHDSQHWAAAKRVLGELTQDKLLDAHIISRDYDEVAVELFNSDGYSIAEQLAARDMVDLVEYSVVDDTKTQYAGYIAMSRQNSAIG

Uniprot

A0A2A4JYC2 A0A212EPH0 A0A194QAV3 A0A194QRW7 A0A2J7RRW2 A0A1B6CRF5 + More
A0A210PZP4 R7UN36 A0A2B4RHX1

Pubmed

22118469 26354079 28812685 23254933

EMBL

NWSH01000358 PCG77021.1 AGBW02013457 OWR43388.1 KQ459232 KPJ02668.1 + More
KQ461155 KPJ08263.1 NEVH01000597 PNF43578.1 GEDC01021152 JAS16146.1 NEDP02005326 OWF41971.1 AMQN01008070 KB302105 ELU04806.1 LSMT01000550 PFX16389.1

Proteomes

UP000218220 UP000007151 UP000053268 UP000053240 UP000235965 UP000242188 + More
UP000014760 UP000225706

Pfam

PF00567   TUDOR        + More
PF00642   zf-CCCH
PF00076   RRM_1
PF01753   zf-MYND

Interpro

IPR002999   Tudor        + More
IPR000571   Znf_CCCH
IPR035437   SNase_OB-fold_sf
IPR036855   Znf_CCCH_sf
IPR012677   Nucleotide-bd_a/b_plait_sf
IPR000504   RRM_dom
IPR002893   Znf_MYND
IPR035979   RBD_domain_sf

SUPFAM

SSF90229 SSF90229 + More
SSF54928 SSF54928

Gene 3D

2.40.50.90 3.30.70.330

ProteinModelPortal

A0A2A4JYC2 A0A212EPH0 A0A194QAV3 A0A194QRW7 A0A2J7RRW2 A0A1B6CRF5 + More
A0A210PZP4 R7UN36 A0A2B4RHX1

PDB

5M9N E-value=5.36878e-08, Score=139

KEGG

101740900 K17601 WD repeat-containing protein 81 | (RefSeq) WD repeat-containing protein 81

GO

GO:0046872 GO:0003723 GO:0009116 GO:0003824 GO:0008152 GO:0004588 GO:0006221 GO:0006402

Length:

679

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00315

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.00043

outside

1 - 679

Pi

222.014602

Theta

187.780862

Tajima's D

0.666365

CLR

0.251892

CSRT

0.561521923903805

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics