SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10175  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013945
Annotation
hypothetical_protein_FF38_04907_[Lucilia_cuprina]
Location in the cell
Cytoplasmic   Reliability : 3.574
 

Sequence

CDS
ATGTGCGACGAAGAAGTTGCCGCGTTGGTAGTAGACAATGGCTCCGGTATGTGCAAGGCCGGTTTCGCAGGAGATGATGCTCCTCGCGCCGTGTTCCCCTCGATCGTGGGAAGGCCCCGCCATCAGGGCGTGATGGTCGGTATGGGACAGAAGGACTCTTATGTAGGAGATGAGGCACAGAGCAAAAGAGGTATCCTGACCCTCAAATACCCCATCGAACACGGAATCGTCACTAACTGGGATGACATGGAGAAGATTTGGCATCATACCTTCTACAATGAGCTGCGTGTCGCCCCCGAGGAACACCCAGTCCTGCTCACTGAGGCTCCCCTCAACCCCAAGGCCAACAGAGAGAAGATGACCCAGATCATGTTCGAAACATTCAACACGCCCGCCATGTACGTCGCCATCCAAGCCGTGCTCTCGCTGTACGCGTCCGGTCGTACCACCGGTATCGTGCTGGACTCCGGCGACGGTGTCTCCCACACCGTGCCCATCTACGAGGGATACGCACTCCCCCACGCCATCCTGCGTCTGGACTTAGCCGGTCGCGACCTCACAGACTACCTCATGAAGATCCTCACCGAGCGCGGCTACTCGTTCACTACCACCGCCGAGCGGGAAATCGTTCGTGACATCAAGGAGAAGCTGTGCTACGTCGCTCTTGACTTCGAGCAGGAGATGGCCACCGCTGCATCCAGCAGCTCCCTCGAGAAGTCTTACGAACTTCCCGACGGTCAGGTCATCACCATCGGAAACGAAAGATTCCGTTGCCCAGAGGCTCTCTTCCAACCCTCGTTCTTGGGTATGGAAGCTTGCGGCATCCACGAGACCACATATAACTCCATCATGAAGTGCGACGTGGACATCCGTAAGGACTTGTACGCCAACACCGTATTGTCCGGTGGTACCACCATGTACCCTGGAATCGCCGACCGTATGCAAAAGGAAATCACAGCTCTCGCCCCATCGACAATGAAGATTAAGATCATTGCTCCTCCAGAGAGGAAGTACTCCGTATGGATCGGTGGATCGATCCTCGCCTCCCTCTCTACCTTCCAACAAATGTGGATCTCGAAACAAGAGTACGACGAGTCTGGCCCCTCCATTGTACACAGGAAGTGCTTCTAA
Protein
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF

Summary

Similarity
Belongs to the actin family.
EMBL
CCAG010000053    GFDF01000322    JAV13762.1    GFDG01002397    JAV16402.1    GFDF01000193    + More
JAV13891.1    JRES01000755    KNC28651.1    GFDG01002398    JAV16401.1    MDVM02000069    PYZ99322.1    CM000366    EDX17197.1    KU884974    ARE68323.1    KQ977279    KYN04384.1    KQ978820    KYN28144.1    KJ612090    AIA25510.1    KY563399    ARK19808.1    EZ423702    ADD19978.1    GL761543    EFZ23137.1    NWSH01000606    PCG75361.1    KQ434924    KZC11593.1    KQ414855    KOC60133.1    AK402313    BAM18935.1    RSAL01000090    RVE48073.1    KX077710    ANA52570.1    OUUW01000003    SPP77736.1    GL888111    EGI67274.1    GALA01001080    JAA93772.1    GAMD01003356    JAA98234.1    KT819630    AML61188.1    KQ976595    KYM79637.1    GFDL01016025    JAV19020.1    KY499580    AQV11934.1    AE014298    AHN59386.1    CH479200    EDW29716.1    AY737530    AAU84923.1    LBMM01001888    KMQ95606.1    GAHY01000539    JAA76971.1    HM449854    ADO32989.1    CP012528    ALC49444.1    MG775274    AVR99436.1    KC702778    AHG54250.1    AB626808    BAK19478.1    KK852421    KDR24293.1    GU176616    ADJ67594.1    MF615617    AUG45771.1    AK401245    BAM17867.1    LJIG01016001    KRT81912.1    GGFL01004207    MBW68385.1    GECZ01025870    JAS43899.1    KQ981189    KYN45235.1    FJ196622    ACN32208.1    GL448543    EFN84350.1    ADTU01029809    KT860051    ALS03939.1    CH963851    EDW75356.1    KX809573    ASZ69794.1    CH480819    EDW53008.1    KQ779356    OAD51990.1    GL439124    EFN67734.1    CH916371    EDV91852.1    GGFM01006370    MBW27121.1    KP331524    AKI87970.1    GGFK01000634    MBW33955.1    MG846876    AXY94728.1    PYGN01000224    PSN50721.1    GDAI01000022    JAI17581.1    AGBW02013457    OWR43395.1    KQ982365    KYQ57141.1    KC879873    KC879874    KC879877    KC879890    KC879893    KC879907    KC879919    KC879920    KC879921    KC879928    KC879929    KC879931    KC879932    KC879945    KC879948    KC879957    KC879967    KC879968    AGR44785.1    AGR44786.1    AGR44789.1    AGR44802.1    AGR44805.1    AGR44819.1    AGR44831.1    AGR44832.1    AGR44833.1    AGR44840.1    AGR44841.1    AGR44843.1    AGR44844.1    AGR44857.1    AGR44860.1    AGR44869.1    AGR44879.1    AGR44880.1    NEVH01024423    PNF17320.1    AXCM01000748    AXCN02002234    CH933810    EDW06687.1    KRF93779.1    KU196666    KU365929    AMD16546.1    ANJ04645.1    CH954180    EDV45956.1    KQS29767.1    CH379064    EAL31912.1    KRT06670.1    JF751025    JF751026    AEO51758.1    AEO51759.1    CH902632    KPU74049.1    KPU74050.1    DS232078    EDS34125.1    CH477736    EAT36735.1    EAT36736.1    CH940664    EDW62998.1    KRF80869.1    KQ971359    EFA08633.1    GEDC01019627    GEDC01018696    GEDC01016947    JAS17671.1    JAS18602.1    JAS20351.1    AXCP01004891    AAAB01008847    EGK96552.1    EGK96553.1    CM000162    EDX02431.1    KRK06744.1   
Pfam
PF00022   Actin
Interpro
IPR004001   Actin_CS        + More
IPR020902   Actin/actin-like_CS       
IPR004000   Actin       
PDB
5WFN     E-value=0,     Score=2021

Ontologies

Topology

Subcellular location
  
Length:
376
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.00162
Exp number, first 60 AAs:
0.00114
Total prob of N-in:
0.03845
outside
1  -  376
 
 

Population Genetic Test Statistics

Pi
265.75874
Theta
194.374908
Tajima's D
1.476904
CLR
0
CSRT
0.788460576971151
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 DEEVAALVVDNGSGMCK 100.00 6e-28
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 2e-14
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 96.43 2e-13
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 96.43 2e-13
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 96.43 2e-13
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 96.43 2e-13
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 96.43 2e-13
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 96.43 2e-13
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 96.43 2e-13
28556443 CPEALFQPSFLGMEAN 96.43 2e-13
28556443 ANTVLSGGTTMYPGIADR 96.43 2e-13
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 8e-12
28556443 GIHETTYNSIMK 95.83 5e-11
28556443 YSFTTTAER 95.45 3e-10
28556443 EITALAPSTMK 95.65 2e-09
28556443 GIVTNWDDMEK 95.65 2e-09
28467696 HQGVMVGMGQK 100.00 3e-09
28556443 FLGMEANGIHETTYNSIMK 100.00 3e-09
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 3e-09
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 3e-09
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 3e-09
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 3e-09
28556443 IWHHTFYNELR 100.00 3e-09
28556443 HQGVMVGMGQK 100.00 3e-09
28556443 LTEAPLNPK 95.45 6e-09
28556443 KDLYANTVMSGGTTMYPGIADR 95.45 1e-08
28556443 KDLYANTVMSGGTTMYPGIADR 95.45 1e-08
28556443 KDLYANTVMSGGTTMYPGIADR 95.45 1e-08
28556443 IWHHTFYNELR 95.45 1e-08
28556443 IWHHTFYNELR 95.45 1e-08
28556443 LCYVALDFEQEMATAASSSSLEK 100.00 1e-08
28556443 LCYVALDFEQEMATAASSSSLEK 100.00 1e-08
28556443 LCYVALDFEQEMATAASSSSLEK 100.00 1e-08
28556443 LCYVALDFEQEMATAASSSSLEK 100.00 1e-08
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 1e-08
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPK 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPK 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPK 100.00 1e-08
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 1e-08
28556443 TTGIVLDSGDGVSH 100.00 1e-08
28556443 TTGIVLDSGDGVSH 100.00 1e-08
28556443 SYELPDGQVITIGNER 100.00 1e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 2e-08
28556443 DFEQEMATAASSSSLEK 100.00 2e-08
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 100.00 2e-08
21761556 AGFAGDDAPR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLTDYLMK 95.24 6e-08
28556443 DLTDYLMK 95.24 6e-08
21761556 GYSFTTTAER 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VALDFEQEMATAASSSSLEK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VALDFEQEMATAAASTSLEK 100.00 3e-06
28556443 TVPIYEGYALPHAILR 100.00 3e-06
28556443 ALPHAILR 100.00 5e-06
28556443 VLGLIETGK 100.00 5e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 WHHTFYNELR 100.00 8e-06
28556443 HQGVMVGMGQKDSYVGDEAQSK 100.00 8e-06
28556443 FQPSFLGMEANGIHETTYNSIMK 100.00 1e-05
28556443 VALDFEQEMATAASSSSLEK 100.00 1e-05
28556443 TVPIYEGYALPHAILR 100.00 1e-05
28556443 TVLSGGTTMYPGIADR 100.00 1e-05
28556443 MQKEITALAPSTMK 100.00 2e-05
28556443 LCYVALDFEQEMATAASSSSLEK 100.00 2e-05
28556443 CPEALFQPSFLGM 100.00 3e-05
28556443 VALDFEQEMATAASSSSLEK 100.00 3e-05
28556443 TVPIYEGYALPHAILR 100.00 3e-05
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