SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10174  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013945
Annotation
PREDICTED:_actin?_cytoplasmic_A3a_isoform_X1_[Bactrocera_dorsalis]
Full name
Actin, cytoplasmic A3a       + More
Actin, cytoplasmic A3      
Location in the cell
Cytoplasmic   Reliability : 3.638
 

Sequence

CDS
ATGTGCGACGAGGAAGTTGCCGCGTTGGTAGTAGACAATGGCTCCGGTATGTGCAAGGCCGGTTTCGCAGGAGATGATGCTCCTCGCGCCGTATTCCCCTCGATCGTCGGAAGGCCCCGCCATCAGGGTGTGATGGTCGGCATGGGACAGAAAGACTCGTACGTAGGAGACGAGGCACAGAGCAAAAGAGGTATCCTGACCCTCAAATACCCCATCGAACACGGAATCGTCACTAACTGGGATGACATGGAGAAGATTTGGCATCATACCTTCTACAATGAGCTCCGTGTCGCCCCCGAGGAACATCCCGTCCTTCTCACTGAGGCTCCCCTCAACCCCAAGGCCAACAGAGAGAAGATGACCCAGATCATGTTCGAAACATTCAACACGCCCGCCATGTACGTCGCCATCCAAGCCGTGCTCTCGCTGTACGCGTCCGGTCGTACCACCGGTATCGTGCTGGACTCCGGCGACGGTGTCTCCCACACCGTACCCATCTACGAGGGATACGCACTCCCTCACGCCATCCTGCGTCTGGACTTGGCCGGTCGCGACCTCACAGACTACCTCATGAAGATCCTCACCGAGCGCGGCTACTCGTTCACTACCACCGCCGAGCGGGAAATCGTTCGTGACATCAAGGAGAAGCTGTGCTACGTCGCTCTCGACTTCGAGCAGGAGATGGCCACCGCTGCATCCAGCAGCTCCCTCGAGAAGTCTTACGAACTTCCCGACGGTCAGGTCATCACCATCGGAAACGAAAGATTCCGTTGCCCAGAGGCTCTCTTCCAACCCTCGTTCTTGGGTATGGAAGCCAACGGCATCCACGAGACCACATACAACTCCATCATGAAGTGCGACGTGGACATCCGTAAGGACTTGTACGCCAACACCGTATTGTCCGGTGGTACCACCATGTACCCTGGAATCGCCGACCGTATGCAAAAGGAAATCACAGCTCTCGCCCCATCGACAATGAAGATTAAGATCATTGCTCCCCCAGAGAGGAAGTACTCCGTATGGATCGGTGGATCGATCCTCGCCTCCCTCTCTACCTTCCAACAGATGTGGATCTCGAAACAGGAGTACGACGAGTCTGGTCCCTCCATTGTACACAGGAAGTGCTTCTAA
Protein
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF

Summary

Miscellaneous
There are at least 5 different actin genes in this organism.
Similarity
Belongs to the actin family.
Keywords
Acetylation   ATP-binding   Cytoplasm   Cytoskeleton   Nucleotide-binding   Oxidation   Complete proteome   Methylation   Reference proteome  
Feature
propeptide  Removed in mature form
chain  Actin, cytoplasmic A3a
EMBL
JTDY01000763    KOB75967.1    HM629442    ADN84932.1    NWSH01000606    PCG75362.1    + More
KC118986    AGC84408.1    AK402394    BAM19016.1    EF207985    ABS57458.1    KY491540    AUG44607.1    GDQN01002966    JAT88088.1    HM449853    ADO32988.1    HQ851398    AEV89776.1    KU218658    ALX00038.1    AJ519536    CAD58315.1    GEDC01003581    JAS33717.1    JF303662    AEA29698.1    AGBW02013457    OWR43394.1    AF286059    AF286060    AAL89657.1    AAL89658.1    AK401093    KQ459232    BAM17715.1    KPJ02656.1    X97614    GEDC01009083    JAS28215.1    EU601173    JQ822245    ACD40029.1    AFM36761.1    CCAG010000053    JQ764814    AFV39665.1    OUUW01000001    SPP75837.1    MF462901    AXU98288.1    AB701689    BAL70288.1    KM923793    AJG43852.1    X04507    U49854    KY676861    ARF19868.1    EU780706    ACF05615.1    GFDF01000193    JAV13891.1    GFDG01002397    JAV16402.1    GFDF01000322    JAV13762.1    AY725779    AAU95192.1    AF182715    AAD54427.1    AY588060    AAT01072.1    CH902619    EDV38176.1    GDQN01004958    JAT86096.1    JRES01000755    KNC28651.1    AF286061    AAL89659.1    MDVM02000069    PYZ99322.1    CM000366    EDX17197.1    KU884974    ARE68323.1    KQ977279    KYN04384.1    KQ978820    KYN28144.1    KJ612090    AIA25510.1    KY563399    ARK19808.1    EZ423702    ADD19978.1    GL761543    EFZ23137.1    PCG75361.1    KQ434924    KZC11593.1    KQ414855    KOC60133.1    AK402313    BAM18935.1    RSAL01000090    RVE48073.1    KX077710    ANA52570.1    OUUW01000003    SPP77736.1    GDHF01006148    JAI46166.1    GL888111    EGI67274.1    GALA01001080    JAA93772.1    GAMD01003356    JAA98234.1    KT819630    AML61188.1    CM000071    ENO01723.1    KQ976595    KYM79637.1    GFDL01016025    JAV19020.1    KY499580    AQV11934.1    CH479183    EDW36417.1    AE014298    AHN59386.1    CH479200    EDW29716.1    AY737530    AAU84923.1    LBMM01001888    KMQ95606.1    GAHY01000539    JAA76971.1    HM449854    ADO32989.1    CP012528    ALC49444.1    MG775274    AVR99436.1    KC702778    AHG54250.1    AB626808    BAK19478.1    KK852421    KDR24293.1    GU176616    ADJ67594.1    MF615617    AUG45771.1    AK401245    BAM17867.1    LJIG01016001    KRT81912.1    GGFL01004207    MBW68385.1    GECZ01025870    JAS43899.1    KQ981189    KYN45235.1    FJ196622    ACN32208.1    GL448543    EFN84350.1    ADTU01029809    KT860051    ALS03939.1    KC879881    AGR44793.1    KC879872    AGR44784.1    KC879915    AGR44827.1    CH963851    EDW75356.1    KX809573    ASZ69794.1    CH480819    EDW53008.1    KQ779356    OAD51990.1    GL439124    EFN67734.1   
Pfam
PF00022   Actin
Interpro
IPR004000   Actin        + More
IPR020902   Actin/actin-like_CS       
IPR004001   Actin_CS       
PDB
5WFN     E-value=0,     Score=2009

Ontologies

Topology

Subcellular location
  
Length:
376
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.999809999999999
Exp number, first 60 AAs:
0.00114
Total prob of N-in:
0.03845
outside
1  -  376
 
 

Population Genetic Test Statistics

Pi
304.935661
Theta
211.713083
Tajima's D
1.380326
CLR
0.004388
CSRT
0.75931203439828
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 DEEVAALVVDNGSGMCK 100.00 5e-28
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 100.00 1e-14
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 100.00 1e-14
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 100.00 1e-14
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 100.00 1e-14
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 100.00 1e-14
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 100.00 1e-14
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 100.00 1e-14
28556443 CPEALFQPSFLGMEAN 100.00 1e-14
28556443 ANTVLSGGTTMYPGIADR 100.00 1e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 2e-14
28556443 GIHETTYNSIMK 100.00 3e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 8e-12
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 8e-12
28556443 EITALAPSTMK 100.00 2e-10
28556443 GIVTNWDDMEK 100.00 2e-10
28556443 YSFTTTAER 95.45 3e-10
28467696 HQGVMVGMGQK 100.00 3e-09
28556443 FLGMEANGIHETTYNSIMK 100.00 3e-09
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 5e-09
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 5e-09
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 5e-09
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 5e-09
28556443 IWHHTFYNELR 100.00 5e-09
28556443 HQGVMVGMGQK 100.00 5e-09
28556443 LTEAPLNPK 95.45 7e-09
28556443 LCYVALDFEQEMATAASSSSLEK 100.00 9e-09
28556443 LCYVALDFEQEMATAASSSSLEK 100.00 9e-09
28556443 LCYVALDFEQEMATAASSSSLEK 100.00 9e-09
28556443 LCYVALDFEQEMATAASSSSLEK 100.00 9e-09
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 9e-09
28556443 KDLYANTVLSGGTTMYPGIADR 100.00 9e-09
28556443 KDLYANTVMSGGTTMYPGIADR 95.45 1e-08
28556443 KDLYANTVMSGGTTMYPGIADR 95.45 1e-08
28556443 KDLYANTVMSGGTTMYPGIADR 95.45 1e-08
28556443 IWHHTFYNELR 95.45 1e-08
28556443 IWHHTFYNELR 95.45 1e-08
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 1e-08
28556443 TTGIVLDSGDGVSH 100.00 1e-08
28556443 TTGIVLDSGDGVSH 100.00 1e-08
28556443 SYELPDGQVITIGNER 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPK 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPK 100.00 1e-08
28556443 VAPEEHPVLLTEAPLNPK 100.00 1e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 3e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 3e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 3e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 3e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 3e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 3e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 3e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 3e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 3e-08
28556443 DLYANTVLSGGTTMYPGIADR 100.00 3e-08
28556443 DFEQEMATAASSSSLEK 100.00 3e-08
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 100.00 3e-08
21761556 AGFAGDDAPR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVMSGGTTMYPGIADR 95.24 6e-08
28556443 DLTDYLMK 95.24 6e-08
28556443 DLTDYLMK 95.24 6e-08
28556443 EITALAPSTMKIK 100.00 2e-07
21761556 GYSFTTTAER 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VALDFEQEMATAASSSSLEK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 3e-06
28556443 VALDFEQEMATAAASTSLEK 100.00 3e-06
28556443 TVPIYEGYALPHAILR 100.00 3e-06
28556443 CPEALFQPSFLGM 100.00 4e-06
28556443 VALDFEQEMATAASSSSLEK 100.00 4e-06
28556443 ALPHAILR 100.00 5e-06
28556443 VLGLIETGK 100.00 5e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 YPIEHGIVTNWDDMEK 100.00 8e-06
28556443 WHHTFYNELR 100.00 8e-06
28556443 HQGVMVGMGQKDSYVGDEAQSK 100.00 8e-06
28556443 FQPSFLGMEANGIHETTYNSIMK 100.00 9e-06
28556443 VALDFEQEMATAASSSSLEK 100.00 1e-05
28556443 TVPIYEGYALPHAILR 100.00 1e-05
28556443 TVLSGGTTMYPGIADR 100.00 1e-05
28556443 MQKEITALAPSTMK 100.00 2e-05
28556443 LCYVALDFEQEMATAASSSSLEK 100.00 2e-05
28556443 TVPIYEGYALPHAILR 100.00 3e-05
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