Silkworm Genome Informatics Database

Gene

KWMTBOMO10166

Pre Gene Modal

BGIBMGA005631

Annotation

cuticular_protein_RR-2_motif_74_precursor_[Bombyx_mori]

Location

Bomo_Chr17(-):3404325-3405353 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.953

CDS

ATGAGTGTTGGACTTCTTACACCAGTTGCGGAGGCGTTAATGATGGGAATCTTAGTGGGGTTGAGAAATAATAATGTGGCAGCTGTTCATGCGGAACCCATCGATCCCAATCCGGCCTATAGCTTCTCGTACGGGGTCCAAGATCCAGCGACAGGAGACCACAAAGACGCGACGGAGACGTTACAGAACGGAGTCGTCCACGGCTCTTACAGTCTGGTCGAGCCTGATGGCCACCTCAGGAAGGTTACGTACACCGCTGATAAGATCAACGGATTCAACGCTGTGGTTGAAAGGACGGGCGGTTCACACGCGGTGGCCGCTGCACCCGTAGCTAAGGTCGTAGCTGCCCCTGTGGCCATACAAGCAGCCCACATCGGTCACGTGGCCCACCCCTGGGGCTAA

Protein

MSVGLLTPVAEALMMGILVGLRNNNVAAVHAEPIDPNPAYSFSYGVQDPATGDHKDATETLQNGVVHGSYSLVEPDGHLRKVTYTADKINGFNAVVERTGGSHAVAAAPVAKVVAAPVAIQAAHIGHVAHPWG

Uniprot

C0H6R6 B4L9C2 A0A0N0BBC0 A0A087ZNJ5

Pubmed

19121390 19280704 17994087 18057021

EMBL

BABH01020168 BR000575 FAA00577.1 CH934105 CH933816 EDW05407.1 + More
EDW17297.1 KQ438551 KOX67212.1

Proteomes

UP000005204 UP000009192 UP000053105 UP000005203

PRIDE

C0H6R6

Pfam

PF00379 Chitin_bind_4

Interpro

IPR031311 CHIT_BIND_RR_consensus + More
IPR000618 Insect_cuticle

ProteinModelPortal

C0H6R6 B4L9C2 A0A0N0BBC0 A0A087ZNJ5

KEGG

100379399 no KO assigned | (RefSeq) CPR74, BmorCPR74; cuticular protein RR-2 motif 74

GO

GO:0042302 GO:0005515 GO:0003676 GO:0005634 GO:0008270 GO:0042773 GO:0016651 GO:0006402 GO:0046872 GO:0003824

Length:

133

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.03193

Exp number, first 60 AAs:

1.72965

Total prob of N-in:

0.04523

outside

1 - 133

Pi

197.913545

Theta

159.649787

Tajima's D

0.753661

CLR

0.298132

CSRT

0.589520523973801

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics