Gene

KWMTBOMO10162

Pre Gene Modal

BGIBMGA005632

Annotation

PREDICTED:_CAP-Gly_domain-containing_linker_protein_1_[Bombyx_mori]

Location

Bomo_Chr17(-):3368975-3372083      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.11

CDS

ATGCGGATACAGGCGGAGCGCGACACGGTTCAACAAGAGCGCGGTAAAGTCGAGAGATCGCTGCGAGAGTTGCGAGGGAGGCTCGAAGTGCTGGAGAGGACGAGGAAGGAGGCGAACGAACGAAACGATACGGCGCAGAAGAGTAACCTCTCTGTTACACACGAGTATTCTGCTAATTTGAAGGACGCGGAGGCAGAAATAATTCAACTGGAAGAAGATATTGATGCGATGGACAAGGAGAAGATGAACTTGACTCAAGAGCTCGACCGCGTACAGAGGGAGGCTTTGGTCTGGCAGAGGAAAGGCATTTTAGCCGTCGAACTGAAGAAGAACATGCAAGCCGCCAAATCAGCCGCCGGCGAGATAGGACAAATGAAAAACGAAATACACCGAATGGAGGTTCGTCGAGAGCACCTTCGTCGGACCAGCGAGAAGTTGGCGGATGATCTAGCGCTGTACGTGACGCGACGCGACACCGCCATGGAGAAGTGTCGCGCCGCCGCCGCCGTTGAGAAGGCGCACGGACACTCTGGACACACCTCGCAGTCTGTCTACCGACACAAGCTGAGACTGGCTAGAGCCGATGTCGCTAGAGTTACGAAGATTATGTGGTAA

Protein

MRIQAERDTVQQERGKVERSLRELRGRLEVLERTRKEANERNDTAQKSNLSVTHEYSANLKDAEAEIIQLEEDIDAMDKEKMNLTQELDRVQREALVWQRKGILAVELKKNMQAAKSAAGEIGQMKNEIHRMEVRREHLRRTSEKLADDLALYVTRRDTAMEKCRAAAAVEKAHGHSGHTSQSVYRHKLRLARADVARVTKIMW

Uniprot

A0A2H1VUA3   A0A2H1WVW7   A0A212F6J9   D0ABA4   A0A194QS22   A0A194QGS3   + More
A0A0L7KQV3   A0A232EI72   K7ITI3   A0A2J7RIP8   A0A1Y1K1Y4   E2B9W0   A0A2P8XIC7   E2ASN7   A0A026WCK7   A0A3L8DHG3   A0A1B6C4I5   A0A088A2U7   A0A2R7W7D7   A0A182SHN9   M7BU16   J9FBN2   A0A078AW17   A0A0N0BCC1   A0A1S3WNQ5   A0A0Q9WW87  

Pubmed

22118469    26354079    26227816    28648823    20075255    28004739    + More
20798317    29403074    24508170    30249741    23624526    23382650    17994087   

EMBL

ODYU01004452    SOQ44336.1    ODYU01011071    SOQ56574.1    AGBW02010007    OWR49348.1    + More
FP102341    CBH09299.1    KQ461155    KPJ08287.1    KQ459232    KPJ02646.1    JTDY01006846    KOB65648.1    NNAY01004350    OXU18018.1    AAZX01003331    NEVH01003493    PNF40700.1    GEZM01095155    JAV55484.1    GL446605    EFN87547.1    PYGN01002030    PSN31759.1    GL442341    EFN63553.1    KK107274    EZA53658.1    QOIP01000008    RLU19766.1    GEDC01028880    JAS08418.1    KK854402    PTY15489.1    KB517139    EMP39290.1    AMCR01012220    EJY75581.1    CCKQ01013709    CDW85407.1    KQ435916    KOX68804.1    CH964289    KRG00342.1   

Proteomes

UP000007151    UP000053240    UP000053268    UP000037510    UP000215335    UP000002358    + More
UP000235965    UP000008237    UP000245037    UP000000311    UP000053097    UP000279307    UP000005203    UP000075901    UP000031443    UP000053105    UP000079721    UP000007798   

Interpro

IPR037386   CCDC40       

ProteinModelPortal

A0A2H1VUA3   A0A2H1WVW7   A0A212F6J9   D0ABA4   A0A194QS22   A0A194QGS3   + More
A0A0L7KQV3   A0A232EI72   K7ITI3   A0A2J7RIP8   A0A1Y1K1Y4   E2B9W0   A0A2P8XIC7   E2ASN7   A0A026WCK7   A0A3L8DHG3   A0A1B6C4I5   A0A088A2U7   A0A2R7W7D7   A0A182SHN9   M7BU16   J9FBN2   A0A078AW17   A0A0N0BCC1   A0A1S3WNQ5   A0A0Q9WW87  

KEGG

101741192    no KO assigned | (RefSeq) CAP-Gly domain-containing linker protein 1

GO

GO:0035082  

PANTHER

PTHR16275  

Length:

204

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.37738

outside

1  -  204

 

 

Pi

77.424626

Theta

112.956297

Tajima's D

-0.430629

CLR

0.509245

CSRT

0.257887105644718

Interpretation

Uncertain