Gene

KWMTBOMO10159  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005570

Annotation

PREDICTED:_lethal(2)_giant_larvae_protein_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr17(+):3284454-3358968      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 2.734

CDS

ATGGCAGGCAGAATGTTGAAGTTTATACGCGGCAAGGGCCAGCAGCCCTCTGCTGAGAGGCAGAAGTTGCAGAATGAACTATTTGCATTCCGAAAGACAGTCCAGCATGGCTTCCCGCACAGAGCGTCAGCACTCGCGTGGGATCCGCTCCTCAGACTCGCGGCGCTTGGTACCGCCACCGGAGCGCTCAAGGTCTACGGCAGACCAGGCGTCGAACTCTACGGCCAACACACCAATTACGAATCGATAGTCACACAGATACATTTCATCACAGGGACAGGCCGTTTGATATCATTATGCGACGATAACAGCCTTCACTTGTGGGAGATCAACGAGAAATCTCTAGTGGAATTAAAGTCGCATGTATTCGAAGGTAAAAATAAAAAGATATCGGCCATATGCGTAGAATCGTCAGCGAAGAACGCTTTACTGGGAACCGAAGGCGGCAACATTTACTCATTGGATTTGAGCGCTTTCACGATCTCGGAAGATGTCATATACCAGGATGTCGTTATGCAGAACTGCCCAGAGGATTACAAAGTTAACCCAGGCGCGGTGGAGTCTGTATACGAACACCCTAAGACTCCTACACGTATTCTGATCGGATACAACCGAGGACTGGCCGTGCTTTGGGACCGGGAGGCTGCGGCTCCCACACATACATTTGTTTCGAATCAACAGCTTGAAAGCTTATGCTGGAATGACGATGGCGAGCACTTCACATCATCGCACAACGACGGTTCGTACGTGACGTGGGAGGTGGCCGGCGCCTCCAGCGACCGACCCCTGAAGGAGCCCGTCACGCCCTACGGACCCTACCCTTGTAAGGCGATCACCAAGATCCTGAACAGGACTAGCGTTGATGGAGAGGACATCACTATATTTGCCGGTGGCATGCCCAGAGCTTCGTACTCCGACAAGTACACGGTTACAGTGCAGCAGGGCGAGAAACATGTGGCCTTCGACTTCACGAGCCGGGTTATAGATTTGTTCACAACGACCCCCGTGCCCCCGGACGGCGCGCCGCTGCAGGAGGAGCAGCCCGACACCCCGGCCCTCGTACAGGTGCAGGCGGTCAACCAGGTCGCCGCCGCTTTGGTGGTCCTGGCGGAAGAGGAGCTGGTGGTGATAGACCTGTGCGACGCGCGCTGGCGGCCGCTGCGGCTGCCGTACCTGGTGTCGGTGCACGCGTCCGCCGTCACCACGGCGCAGCTGGCCGACGGCGTGGCGCCCGCAGTCTACGACAACATCGTCGCCGCGGGTCAACAACAAACGGAGAATCAATACTCTGAAAGTCCGTGGCCGATTTCCGGTGGGGTGGTGGAGACGGCGGAGCTGACCGACAGACAGGTGCTGCTCACGGGGCACGAGGACGGCTCCGTGCGGTTCTGGGACGTGACCGGCGTCGCCATGACCCCCCTGTACAAGTACACCACCGCGCAGCTGTTCAGTGGTGAAGAACTTGGTGAAAACAACGACAGTCAGACCACAGATGAAGAGGAGTGGCCTCCCTTCAGGCGAGTCGGCACCTTCGACCCGTACAGCGACGACCCCCGGCTCGCGGTCAAAAAGGTTATATTGTGCCCGTTATCTGGAATGCTCACCATCGGCGGAGCCGCCGGCCATATTGTCATAGCCAGTCTCAAGACCTCTCCGAGCACCACCGAAGTCAAGTCGGTGTCAGTGAATATAGTGTCAGACAGAGACGGCTTCGTGTGGAAGGGACACGGGCAGCTCACGTTGAGGGCCGGCACGCACACCTTCCCGCAGGGATATCAGGCGACCTCGGTGGTGCAGCTGCAGCCCCCGGCGGCCGTGACGTCACTGAGCGCGCAGTGGGAGTGGGGCGTGGTGTGCGCCGGCACCGCGCACGGGCTGGCGCTGGTGGACGCGCTGGGCCCGGCACCCGCGCCGCTGCTGCATAAGTGCACGCTCAACCCGCACGATCACGGATCCGGTGACACGCCAATATCGAGAAGAAAGTCCTTCAAGAAATCCTTGAGAGAGTCATTCAGGAGGCTTCGTAAAGGACGTTCACAACGGCGACAGACGACATCGAATCCCACCTCGCCCACACAACCGATTCCGAAGAAGCCAATTGACAAAGCCGCCTCGGAAACGGACGCGGAAATCAAACCGATCGAGCGCGCGGTGGAGGCCCGCTCCACGGACGACGCCTACGGCTCGATGGTGCGCTGCCTGTACTTCGCGAGGACCTTCCTCATCAATACCCAGCAATCGACGCCGACGCTATGGGCCGGCACGAACAACGGCACTGTGTACGCCTTCACGCTGCACGTGCCCAACACTAACAAACGGAAAGAGGAACCAGTAACGTGTCAGCTAGCGAAAGAAATACAGTTGAAGCACAGGGCCCCGGTCATAGGGATCACAGTACTCGACGGCGCCTCCGTACCTCTGCCCGATCCCCTAGAGGTGGAACGAGGTGTGTCCCCGCTACCGGAGCCGGGTACACATCGTGTAGTCATCACGTCGGAGGAACAGTTCAAGATATTCACTCTGCCTTCGTTGAAACCGCACAACAAGTACAAGCTGACCGCGCACGAGGGCGCTCGGGTTCGGCGCACGGCGTGGTCGCAGTTCTCGTGCGGCGCGCACCGGGAGTGGTGCTTGCTGTGCCTCACCAACCTCGGCGACTGCCTCGTGCTCAGCCCGGAGCTGCGCCGCCAGCTCAACGCCGCCGCCGTCAGGAAGGAGGACATCAATGGGATTTCGAGTTTATGTTTCTCGAAACGAGGAGAAGCTCTCTACCTGCACTCGTCTTCCGAATTACAACGGATTACTTTATCTGCTACGAAGGTGACGATCGCGGAGTGCCACGTGCTGTTGGCGCCCTGGGCGGCCGCGCTGCGGGGGCCCGCGCCGGAGCCGCCGCTCACCAACGGGGAGCATAAGGTAGACTGTGTACTCATAGTGGGATTGACGACACAGGAAGAGGTGCCGGAGACAGCTCATGACGTCACGGCGGCCTCGGCGGACATCACCGTGGACAGCGTGCGCGACCACACCAGCGCGGAGCACCCGCCCGAACTCAACATCAACTTGCAGAACACGCAAGTGAATACGAGTTCGATGGTAATAAAGACAACGACGCGCACAACGGTGAACGAGACCAACGCGGACGGCACCACCACCACCACCACCACGACCAGCACTAACAACGCCAACGAGAACATCCTAGAGCACAGTCGCGAGGAGGGAGTCATCACCCGCATCGAGACGGGAACCGTGACGGTGCCGGCCGGCACAGATCCGAAGCTGATCCTCGAGATGTTTGATCGACAACGGTCCCCCCTGGCGGTTGTTAAAAATCCAACCATTACAACAAAACTTTGTGCAAAATGCTACAGAAAAATATTATCATTTCATAAATTTAAATCGCTGGCCATAGAAAATGATATTTATTTAGAAAGTCAGTGTACATCTGCCAAGCACCAGATTCCACTCAATAACAATGAGAATGAGATTGGGCCCACACAACAGTTTAGTATACAAATGGTTGACTGTCTCTCTCCTGAAATGAACAACAAAGATATAATATTCAGAGAACAAGTCAAGACAGAAATGGTATTGGCTCATGATGAAGAAAATGACAGTATCGAGTTAGGAAAATCAGAGCCTCCAGAGTTAGAGTCTGATGATGAATATTTGAGTGTAATTAAAAAAATTAAAACGGAGTATGGTATGGATGGTAAAGATGCTAAGATCAAACGTAAAAATGCTACTAAAAGAAAATCAAATTCCAAAAAGATAGATAATCCAAAAAATAATTTAAAAATGATGTGCGAGGAATGCGGAATTACTGTAAAAGATTTAAAAGAGCATATGAGACAACATCTTCCTCCAGACGAGAGACCAAGAGTCAATTGTCACCTTTGTGAGGAAACGTTTTCATCGGCCAATTCAAAATACAAACATGTGAGACGTAAACATATGAACATCAAACAGAATTGTAAAATCTGTAATAAGGCTGTCGCAAACCTGAAAGCGCACATATTAGTGGTGCACAATACGGAATCACTGCCGTTTGAATGTATAGCATGCGGACGCGGGTTCATATCGAAGTCGCGCCTTGACGTTCATATGGCGGTGCACACCAAGGATCGCCCTCATAAATGCTCATTTTGCATTAAACGGTTTAGGACTAAGATTTGCATGCAGCTACACGAGCGACAAGTCCACAAAAAGGAGAAGAATCATCTCTGTCAGTTCTGTTCGAAAACTTTCTTCAAAAAATATCACTTACAAGTGCATATAAGAACTCACACGAAGGAGAAACCGTACGAATGCAACGAGTGCGGCAAGTGGTTCAGCTCGAAGAACGTGCTGAAGAACCACAAGCTCATACACGAGGACGTCAAGAGATTCGCGTGCACGCTCTGCGATATGTCGTTCATTAGAAACGGGTACCTGCATGCGCACATGCTGTCCCACAAGAAAGAGAAACGCTTCGAGTGTCAGTACTGCGGGGCGAAGTTCCACCGCTCCGACCACAGGAGGCGCCACGAGCACACCGTGCACCGCCGACACCTCGACAACGCTCACGACACACCCTTCACGGCCATATAA

Protein

MAGRMLKFIRGKGQQPSAERQKLQNELFAFRKTVQHGFPHRASALAWDPLLRLAALGTATGALKVYGRPGVELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYSLDLSAFTISEDVIYQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRILIGYNRGLAVLWDREAAAPTHTFVSNQQLESLCWNDDGEHFTSSHNDGSYVTWEVAGASSDRPLKEPVTPYGPYPCKAITKILNRTSVDGEDITIFAGGMPRASYSDKYTVTVQQGEKHVAFDFTSRVIDLFTTTPVPPDGAPLQEEQPDTPALVQVQAVNQVAAALVVLAEEELVVIDLCDARWRPLRLPYLVSVHASAVTTAQLADGVAPAVYDNIVAAGQQQTENQYSESPWPISGGVVETAELTDRQVLLTGHEDGSVRFWDVTGVAMTPLYKYTTAQLFSGEELGENNDSQTTDEEEWPPFRRVGTFDPYSDDPRLAVKKVILCPLSGMLTIGGAAGHIVIASLKTSPSTTEVKSVSVNIVSDRDGFVWKGHGQLTLRAGTHTFPQGYQATSVVQLQPPAAVTSLSAQWEWGVVCAGTAHGLALVDALGPAPAPLLHKCTLNPHDHGSGDTPISRRKSFKKSLRESFRRLRKGRSQRRQTTSNPTSPTQPIPKKPIDKAASETDAEIKPIERAVEARSTDDAYGSMVRCLYFARTFLINTQQSTPTLWAGTNNGTVYAFTLHVPNTNKRKEEPVTCQLAKEIQLKHRAPVIGITVLDGASVPLPDPLEVERGVSPLPEPGTHRVVITSEEQFKIFTLPSLKPHNKYKLTAHEGARVRRTAWSQFSCGAHREWCLLCLTNLGDCLVLSPELRRQLNAAAVRKEDINGISSLCFSKRGEALYLHSSSELQRITLSATKVTIAECHVLLAPWAAALRGPAPEPPLTNGEHKVDCVLIVGLTTQEEVPETAHDVTAASADITVDSVRDHTSAEHPPELNINLQNTQVNTSSMVIKTTTRTTVNETNADGTTTTTTTTSTNNANENILEHSREEGVITRIETGTVTVPAGTDPKLILEMFDRQRSPLAVVKNPTITTKLCAKCYRKILSFHKFKSLAIENDIYLESQCTSAKHQIPLNNNENEIGPTQQFSIQMVDCLSPEMNNKDIIFREQVKTEMVLAHDEENDSIELGKSEPPELESDDEYLSVIKKIKTEYGMDGKDAKIKRKNATKRKSNSKKIDNPKNNLKMMCEECGITVKDLKEHMRQHLPPDERPRVNCHLCEETFSSANSKYKHVRRKHMNIKQNCKICNKAVANLKAHILVVHNTESLPFECIACGRGFISKSRLDVHMAVHTKDRPHKCSFCIKRFRTKICMQLHERQVHKKEKNHLCQFCSKTFFKKYHLQVHIRTHTKEKPYECNECGKWFSSKNVLKNHKLIHEDVKRFACTLCDMSFIRNGYLHAHMLSHKKEKRFECQYCGAKFHRSDHRRRHEHTVHRRHLDNAHDTPFTAI

Uniprot

A0A194QB38   A0A2J7Q3S4   A0A2J7Q3P7   A0A3L8DEL2   A0A195CTM4   A0A158NTR4   + More
A0A0P4VYT6   A0A023F356   A0A069DZP9   A0A224X621   A0A0V0G3S9   T1HCU9   A0A1L8DVZ1   A0A1L8DW03   A0A1L8DW02   W5MCA3   Q6NRG4   A0A2Y9M323   A0A2Y9M5S3   A0A2Y9MGN2   F6Z9W6   A0A2Y9T6I3   A0A2Y9MBF5   A0A2K5CZU7   A0A1S3F7U4   A0A1S3F7A4   A0A2K5CZW4   E2RPS3   F7CIU8   A0A1S3F5K5   A0A0D9R738   A0A3Q7NGW2  

Pubmed

26354079    30249741    21347285    27129103    25474469    26334808    + More
17495919    16341006    19892987   

EMBL

KQ459232    KPJ02644.1    NEVH01019065    PNF23209.1    PNF23211.1    QOIP01000009    + More
RLU18875.1    KQ977279    KYN04048.1    ADTU01026117    GDKW01001880    JAI54715.1    GBBI01003141    JAC15571.1    GBGD01000260    JAC88629.1    GFTR01008501    JAW07925.1    GECL01003493    JAP02631.1    ACPB03000213    GFDF01003477    JAV10607.1    GFDF01003478    JAV10606.1    GFDF01003476    JAV10608.1    AHAT01013466    AHAT01013467    AHAT01013468    AHAT01013469    BC070788    AAH70788.1    AAEX03003715    AQIB01148471    AQIB01148472   

Proteomes

UP000053268    UP000235965    UP000279307    UP000078542    UP000005205    UP000015103    + More
UP000018468    UP000248483    UP000002280    UP000248484    UP000233020    UP000081671    UP000002254    UP000002281    UP000029965    UP000286641   

Pfam

PF08366   LLGL        + More
PF12894   ANAPC4_WD40
PF08596   Lgl_C
PF00400   WD40

Interpro

IPR000664   Lethal2_giant        + More
IPR013577   LLGL2       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       
IPR013905   Lgl_C_dom       
IPR017986   WD40_repeat_dom       
IPR024977   Apc4_WD40_dom       

SUPFAM

SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A194QB38   A0A2J7Q3S4   A0A2J7Q3P7   A0A3L8DEL2   A0A195CTM4   A0A158NTR4   + More
A0A0P4VYT6   A0A023F356   A0A069DZP9   A0A224X621   A0A0V0G3S9   T1HCU9   A0A1L8DVZ1   A0A1L8DW03   A0A1L8DW02   W5MCA3   Q6NRG4   A0A2Y9M323   A0A2Y9M5S3   A0A2Y9MGN2   F6Z9W6   A0A2Y9T6I3   A0A2Y9MBF5   A0A2K5CZU7   A0A1S3F7U4   A0A1S3F7A4   A0A2K5CZW4   E2RPS3   F7CIU8   A0A1S3F5K5   A0A0D9R738   A0A3Q7NGW2  

PDB

6N8S     E-value=0,     Score=1805

KEGG

101742621    K06094 lethal(2) giant larvae protein | (RefSeq) lethal(2) giant larvae protein

GO

GO:0030864   GO:0008593   GO:0030866   GO:0005096   GO:0005737   GO:0019901   GO:0032878   GO:0065003   GO:0017137   GO:0045159   GO:0051294   GO:0005886   GO:0046872   GO:0005515   GO:0003676   GO:0005634   GO:0008270   GO:0042773   GO:0016651   GO:0006402   GO:0003824  

Length:

1529

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0422100000000001

Exp number, first 60 AAs:

0.00834

Total prob of N-in:

0.00163

outside

1  -  1529

 

 

Pi

222.151838

Theta

154.503407

Tajima's D

0

CLR

11.069992

CSRT

0.371431428428579

Interpretation

Uncertain