Gene

KWMTBOMO10158

Pre Gene Modal

BGIBMGA005633

Annotation

PREDICTED:_thrombospondin_type-1_domain-containing_protein_7A-like_[Bombyx_mori]

Location

Bomo_Chr17(-):3177485-3251913      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.094

CDS

ATGGCTGCCCTACAGTGGCTATTGCTCACTTTGGCGCTGACCACAGCTACAGCTGACGAAGCTACCGACCCCAAAGGCCTTCAAGAACCTGCCACTGAGTCCGTTGTGAATGATGGTGAATACTCCGCGTACGTGGGCCCCTGGGCTGAATGCAAACTCATGGGGCAGGGGGAGCACGCCACGAGGACCGTTGAAAGATATCTAAGACCGGAAGCCAACTCTTTAGTTCACACGCCTTCATTGGGTATACAACGTCGTCAAGTGCAGTGCCGTTACAAGGATGGCAAGTTTGTCGAAAACATGTACTGCGGTGCTGCTCTCGCACAAATTGGCACCACGCGAATTTGTCTCATGAAAGTAGACTGCGCTCTTGGAGAATGGCTTCCATGGAGGCCCAGATCAGACGGAGCCCTTGTACGGACTAGACGCCTGAAACGACTTCCAATAGGTGGTGGTGTGGAGTGCGACGTGGTAGAGGAAGTTCGTCCAGCGGCTATGGAAGCGAGTGCTCATTGGGTACCGGGCGCATGGGGACCATGCCGTGTTGCCATTGAGACCACGGCACCTCTGCCTCCCGGTGAACTGAACATTTTTAAGCTCGTACCTAATACCCGAACATCAAAGCTCATTATTTAA

Protein

MAALQWLLLTLALTTATADEATDPKGLQEPATESVVNDGEYSAYVGPWAECKLMGQGEHATRTVERYLRPEANSLVHTPSLGIQRRQVQCRYKDGKFVENMYCGAALAQIGTTRICLMKVDCALGEWLPWRPRSDGALVRTRRLKRLPIGGGVECDVVEEVRPAAMEASAHWVPGAWGPCRVAIETTAPLPPGELNIFKLVPNTRTSKLII

Uniprot

A0A2H1V9E5   A0A2A4K3G2   A0A3S2NYX4   A0A212EP93   A0A194QSJ5   A0A194QAS9   + More
A0A3P8ZTI9   A0A3P8XYA3   I3NBU6   J9P417   F1PMA5   F1PSZ0   A0A2I0MQX5   A0A1V4KBT3   A0A2I2UI70   M3WI04   A0A337SR10   A0A3P4RVM9   A0A0P7UEU5   A0A3M0K1C3   A0A3Q7TWE2   A0A091EGP6   A0A3Q7SV06   A0A3Q2H400   A0A2Y9JHB6   A0A3B3SI49   A0A3B3SJV8   A0A3B3SKG1   A0A3B3SJK6   A0A3Q2KZF4   F7D3M3   A0A3Q2GWW3   A0A3Q7XIQ2   A0A3Q7PG28   A0A3Q7WLH6   A0A3Q7WLH1   W5PAE1   A0A3Q7WLI2   A0A3Q7WLI7   A0A3Q7VMT3   A0A3Q7X796   A0A2U3VKU2   A0A3B3SGP7   A0A384BQ72   A0A2K5IHZ2   A0A2K5CIX6   A0A2K6PZ27   A0A2K6PZ45   A0A2K5CJ93   A0A2Y9H1A2   A0A2K5QZ33   A0A2K5QZ38   A0A2U3XHT2   A0A2I2Y6R2   A0A2I3T6T3   G1SW21   A0A2R9A1X1   A0A2I2ZB04   A0A2K5QZ65   F6U7M2   G3QYB2  

Pubmed

22118469    26354079    25069045    16341006    23371554    17975172    + More
19892987    29240929    20809919    25362486    22398555    16136131    21993624    22722832    17495919   

EMBL

ODYU01001380    SOQ37470.1    NWSH01000227    PCG78210.1    RSAL01000090    RVE48087.1    + More
AGBW02013517    OWR43277.1    KQ461155    KPJ08289.1    KQ459232    KPJ02643.1    AGTP01104191    AGTP01104192    AGTP01104193    AGTP01104194    AGTP01104195    AGTP01104196    AGTP01104197    AGTP01104198    AGTP01104199    AGTP01104200    AAEX03009334    AAEX03009335    AKCR02000004    PKK32083.1    LSYS01003958    OPJ81868.1    AANG04003224    CYRY02044174    VCX38990.1    JARO02012075    KPP59479.1    QRBI01000123    RMC05050.1    KK718434    KFO56286.1    AMGL01085905    AMGL01085906    AMGL01085907    AMGL01085908    AMGL01085909    AMGL01085910    AMGL01085911    AMGL01085912    CABD030049880    CABD030049881    CABD030049882    CABD030049883    CABD030049884    CABD030049885    CABD030049886    CABD030049887    CABD030049888    CABD030049889    AACZ04068618    AACZ04068619    AC188550    AC188559    AC191956    AAGW02035588    AAGW02035589    AAGW02035590    AAGW02035591    AAGW02035592    AAGW02035593    AAGW02035594    AAGW02035595    AAGW02035596    AAGW02035597    AJFE02087991    AJFE02087992    AJFE02087993    AJFE02087994   

Proteomes

UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    UP000265140    + More
UP000005215    UP000002254    UP000053872    UP000190648    UP000011712    UP000034805    UP000269221    UP000286640    UP000052976    UP000002281    UP000248482    UP000261540    UP000286642    UP000286641    UP000002356    UP000245340    UP000261680    UP000233080    UP000233020    UP000233200    UP000248481    UP000233040    UP000245341    UP000001519    UP000002277    UP000001811    UP000240080    UP000002280   

Pfam

PF00090   TSP_1

Interpro

IPR000884   TSP1_rpt        + More
IPR036383   TSP1_rpt_sf       

SUPFAM

SSF82895   SSF82895       

Gene 3D

2.20.100.10    

ProteinModelPortal

A0A2H1V9E5   A0A2A4K3G2   A0A3S2NYX4   A0A212EP93   A0A194QSJ5   A0A194QAS9   + More
A0A3P8ZTI9   A0A3P8XYA3   I3NBU6   J9P417   F1PMA5   F1PSZ0   A0A2I0MQX5   A0A1V4KBT3   A0A2I2UI70   M3WI04   A0A337SR10   A0A3P4RVM9   A0A0P7UEU5   A0A3M0K1C3   A0A3Q7TWE2   A0A091EGP6   A0A3Q7SV06   A0A3Q2H400   A0A2Y9JHB6   A0A3B3SI49   A0A3B3SJV8   A0A3B3SKG1   A0A3B3SJK6   A0A3Q2KZF4   F7D3M3   A0A3Q2GWW3   A0A3Q7XIQ2   A0A3Q7PG28   A0A3Q7WLH6   A0A3Q7WLH1   W5PAE1   A0A3Q7WLI2   A0A3Q7WLI7   A0A3Q7VMT3   A0A3Q7X796   A0A2U3VKU2   A0A3B3SGP7   A0A384BQ72   A0A2K5IHZ2   A0A2K5CIX6   A0A2K6PZ27   A0A2K6PZ45   A0A2K5CJ93   A0A2Y9H1A2   A0A2K5QZ33   A0A2K5QZ38   A0A2U3XHT2   A0A2I2Y6R2   A0A2I3T6T3   G1SW21   A0A2R9A1X1   A0A2I2ZB04   A0A2K5QZ65   F6U7M2   G3QYB2  

KEGG

101741472    no KO assigned | (RefSeq) thrombospondin type-1 domain-containing protein 7A-like

GO

GO:0016021   GO:0005886   GO:0031532  

SignalP

Position:   1 - 18,         Likelihood:  0.998973

 

 

Length:

211

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00882

Exp number, first 60 AAs:

0.00341

Total prob of N-in:

0.02107

outside

1  -  211

 

 

Pi

391.076991

Theta

164.962752

Tajima's D

-1.201838

CLR

0.654749

CSRT

0.104444777761112

Interpretation

Uncertain