Silkworm Genome Informatics Database

Gene

KWMTBOMO10153

Pre Gene Modal

BGIBMGA005567

Annotation

HM00051_[Heliconius_melpomene]

Location

Bomo_Chr17(+):3132204-3134416 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.5 Nuclear Reliability : 1.43

CDS

ATGCGTCGTCTGGAATTGAACTGGCTCCGGACTCGTTATTCAGAGTTACAGCGCGAACGACGTGGGCTGCATGCACAGATCCTACGTCTGAGATCTTTGTACACTCAACAACAACTACTATTGGAAAGTCTTTGGGGCAACGATCTCCGCCCGGGCACGGCGCAAGAGAGTGCCCTGACTAAGGCGTCGGCGTTACGTGACGCCTTAGCCTCTGTGAGTGCCAAGCTACGGGCGGCCGCGGAGTACGCACACGCTGCCGTCAGACTCCTCGATGATGCTCTGCCCGCTTGGAAACTCACCTCAGTCGGCAAGTGGGTGTCATAA

Protein

MRRLELNWLRTRYSELQRERRGLHAQILRLRSLYTQQQLLLESLWGNDLRPGTAQESALTKASALRDALASVSAKLRAAAEYAHAAVRLLDDALPAWKLTSVGKWVS

Similarity

Belongs to the complex I 75 kDa subunit family.

Uniprot

H9J7S5 A0A2A4K3I1 A0A2H1V9G5 A0A3S2TJU3 D0AB99 L7X0R9 + More
A0A0L7KRA8 A0A212EP63

Pubmed

19121390 23674305 26227816 22118469

EMBL

BABH01020191 NWSH01000227 PCG78212.1 ODYU01001380 SOQ37469.1 RSAL01000090 + More
RVE48088.1 FP102340 CBH09294.1 KC469893 AGC92704.2 JTDY01006621 KOB65827.1 AGBW02013517 OWR43278.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000037510 UP000007151

PRIDE

H9J7S5

Pfam

PF10588 NADH-G_4Fe-4S_3 + More
PF00384 Molybdopterin

Interpro

IPR019574   NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd        + More
IPR006963   Mopterin_OxRdtase_4Fe-4S_dom
IPR000283   NADH_UbQ_OxRdtase_75kDa_su_CS
IPR010228   NADH_UbQ_OxRdtase_Gsu
IPR006656   Mopterin_OxRdtase
IPR036010   2Fe-2S_ferredoxin-like_sf
IPR001041   2Fe-2S_ferredoxin-type

SUPFAM

SSF54292 SSF54292

CDD

cd00207 fer2

ProteinModelPortal

H9J7S5 A0A2A4K3I1 A0A2H1V9G5 A0A3S2TJU3 D0AB99 L7X0R9 + More
A0A0L7KRA8 A0A212EP63

KEGG

NA

GO

GO:0051536 GO:0042773 GO:0008137 GO:0016020 GO:0009055

Length:

107

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00078

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.27401

outside

1 - 107

Pi

154.10994

Theta

130.683268

Tajima's D

0.500777

CLR

0

CSRT

0.516874156292185

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics