SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10148
Annotation
HM00048_[Heliconius_melpomene]
Location in the cell
Mitochondrial   Reliability : 2.699
 

Sequence

CDS
ATGTCTGGAGTAAAGCAAGTACGAAATAAAAAGCTTCTCCCGGATTTGCGTAAAGAAGGCGAACTCACTAAAGAAATAATATTATCTACGAAGGAGAAACACGGAGTTCCTGTGACGTCTAGACTTTTTTCTCATCACACCTTAGCGAGCGTTAGAAAACTAAGCTTTTATTTTCCTTATAATTTGCCAGACGACAGCCTGGACTTCATTTTAACGTCCAAATACAATCACTCGACGGAGCAATTTGCGGATAAAGTCGACGTGTTCCTGCAGCCAGAGACGATCGGTTGCGAGACCTGGCGACGACTTCGAAACACCTGTGATAAATTACCAAGCAGTGGAGTCCCAATGGTGAGTTTTCACTTGAAAAATAAGGCACTAGCTATTTCTAAATATATCTTTTAG
Protein
MSGVKQVRNKKLLPDLRKEGELTKEIILSTKEKHGVPVTSRLFSHHTLASVRKLSFYFPYNLPDDSLDFILTSKYNHSTEQFADKVDVFLQPETIGCETWRRLRNTCDKLPSSGVPMVSFHLKNKALAISKYIF

Summary

EMBL
KC469893    AGC92701.2    FP102340    CBH09291.1    AGBW02013517    OWR43281.1    + More
KQ461155    KPJ08293.1    NWSH01000227    PCG78219.1    KQ459232    KPJ02640.1    JTDY01005985    KOB66392.1    KQ971362    EFA07888.1    APGK01057000    APGK01057001    KB741277    ENN71240.1    KB631850    ERL86702.1    KK107063    QOIP01000005    EZA61076.1    RLU22957.1    DS231951    EDS28621.1    ATLV01026995    KE525421    KFB53729.1    GFDL01004418    JAV30627.1    CVRI01000073    CRL07755.1    GFDL01004416    JAV30629.1    AXCM01001134    AJVK01009786    LBMM01002126    KMQ95242.1    AAAB01008980    EAL39185.1    JXUM01141868    KQ569321    KXJ68665.1    CH477657    EAT37695.1    KQ976662    KYM78339.1    APCN01001775    GL888404    EGI61598.1    GL444666    EFN60748.1    GAPW01004915    JAC08683.1    KQ979579    KYN20648.1    GL445864    EFN89010.1    UFQT01000093    SSX19609.1    KQ434773    KZC03995.1    ADTU01019457    KZ288197    PBC33710.1    KQ977054    KYN06081.1    NNAY01003762    OXU18888.1    KQ762367    OAD55914.1    KQ414914    KOC59522.1    KQ981914    KYN33089.1    CCAG010023607    GBHO01013091    GBRD01004593    JAG30513.1    JAG61228.1    KQ435801    KOX73240.1    KQ982314    KYQ58098.1    CH916368    EDW04216.1    GAKP01005719    GAKP01005717    GAKP01005715    JAC53233.1    JRES01000869    KNC27658.1    GDHF01029370    GDHF01013044    JAI22944.1    JAI39270.1    CH479180    EDW28762.1    CP012523    ALC40044.1    CH379060    EAL33618.2    OUUW01000004    SPP78952.1    GAMC01008638    GAMC01008636    JAB97917.1    KK855922    PTY24376.1    GECU01011580    JAS96126.1    GEDC01030815    JAS06483.1    AE014134    AY118683    AAF53190.2    AAM50543.1    CH480831    EDW45917.1    CM000361    CM002910    EDX04807.1    KMY89919.1    CM000157    EDW88186.1    CH933807    EDW11401.1    CH963857    EDW76507.1    CH954177    EDV58798.1    RCHS01003527    RMX41047.1    KB199981    ESP03534.1   
Pfam
PF12494   DUF3695        + More
PF00339   Arrestin_N
PF02752   Arrestin_C
Interpro
IPR022179   DUF3695        + More
IPR011022   Arrestin_C-like       
IPR014756   Ig_E-set       
IPR014752   Arrestin_C       
IPR011021   Arrestin-like_N       
SUPFAM
SSF81296   SSF81296       
Gene 3D

Ontologies

Topology

Length:
134
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00364
Exp number, first 60 AAs:
0.00091
Total prob of N-in:
0.54383
inside
1  -  134
 
 

Population Genetic Test Statistics

Pi
276.85234
Theta
172.416529
Tajima's D
2.647718
CLR
0
CSRT
0.957302134893255
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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