Gene

KWMTBOMO10144  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005637

Annotation

Protein_penguin_[Papilio_xuthus]

Location

Bomo_Chr17(-):3056994-3062769      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.643

CDS

ATGCAGAAAGGTAAAAGGAAAAGTGATGAAGATGGTGTTAGTTCACCAAAAAAGAAAAAACTAAATAGTTCGCATGAACAAGATAATAAAGTTAAAAACATCAAAAACAAAATAAACCTAAAAGGTAAAAAATTTAATAAGGATGGAGTAAAAGGTTTCAAAAAATTTACTAAAAACGACAAAGGATCTAAATTTGTTAAAACAAAAGAAAAATCGAATTTTTCTAAAGATGAAGCAAACGGAGAAAAGCCAAAATGGGCTGAAATGAAAAAAGAGAAAAAACAACTAAGGACTGTCAGACGTAAAGCCAAAATAACAGCTGAAGTATTTGAGATTTCACATAAGGCCAAGTTGTTAGCAGCACAAATACAGAGAAAAGTTGTGAAATCTGACTTCAAAATAAACTCCTGTAAAGAATTGCACAATATGTTAAAGGGACAATACAAGTCTATTGCTCTCACACATGATCTTAGTCGAGTTATTCAAGTTCTACTAAAACATAGCCCTGAAGACATTATAAATGAAATAACGAAAGAGCTTCTAGACATTATAGTACAGATGGGTCAATCTAAGTACGCGCATCATTCCGTTAAGCGAATACTGAAATATGGAACAGATTTCATTCGGCATGAGGTTTTGAAGAAGTTTTATGGACATGTTGTATCCCTGTCAACTCATGCTATTAGTGCACCTGTCTTGGATTATGCATATGGGGAGTTTGCCTCGAAAAAGGAAAAATGCCACATGCAACAAGAATTCTATGGAGAGATTTATAAGAATACAAAAGACGACAAGGTAAAGACACTCAGAGATGCATACAAAGACAGTCCAGAAATGAAATCAGCTATACTCCAGGCCTGTAAGACCAACTTACAGAAGATATTAGACAAAAACCTACATGATGGAGAATTGTTTCATTCTGTGTTATATGACTATATCTGTGAATGCAGCCAAGAAGATAGAGTAGATTTTATTTCTATTCTTAGCCCACTGATTGTCCCACTCAGTAATTCTTTACCTGGTGTCAATGCTGCCAGTATGTGCGTTTGGCAGGGTACAAATAAGGACAAGAAAACAATTTTAAAAGTGGTCAAGGAACATGCTATTCCTTTAAAAGACTATTGTGTCCACTCTGGCTGCCAATATAAAGACATTGCTAAGGACCACTGGGGTAATATGGTAATTCACTGGTTAGTAAAACCAAAAGACACAGCTGCTTTCCATCCTAGTTTAATTAAGTTTTTGGAAGATGGTGCTAAGAGTGGAACATCGAAGAAAGACACAGAAATTCGTGTTTTGGAGCTTAGGGAAGCTATATTACCTGCTCTAAAGAAAGATATGGAAACAGATCCTAAATTCTGGCTAAGCAATAAATCTAATATGTTGTTGGCTGTTGCTGTATTGTCTATAGAATCATCTAAAGAGATTCTGCATGCATTGGCAAAAGTGATCTGCGAGACTGACTGGCACATGCAGGTGGAAGGGAAGGACGATACCCTGGCGATTGAGGATGCTGGCATACACATGTGCTTAAAAAAACTAGCCAGTTTAGACAAAGAAAAATCGGCTGATACTCTTGGTGAAGCTATAAGTGAACATTTAAATGATGAAACTATTAAAGTGTGGATACGTACAAATAGGGGTTGCTTTTTCCTATTGAAATTGATAGAGAGTAATCGTGAAGAAGTAGCTAAGAAATTAAAAGCAAAATTAAAACCACATGTAAATATTTTGAAGCAACAATCATCGGAAGGTGCTAAATTATTGTTACAGAATGTACAGAATAAATAG

Protein

MQKGKRKSDEDGVSSPKKKKLNSSHEQDNKVKNIKNKINLKGKKFNKDGVKGFKKFTKNDKGSKFVKTKEKSNFSKDEANGEKPKWAEMKKEKKQLRTVRRKAKITAEVFEISHKAKLLAAQIQRKVVKSDFKINSCKELHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKYGTDFIRHEVLKKFYGHVVSLSTHAISAPVLDYAYGEFASKKEKCHMQQEFYGEIYKNTKDDKVKTLRDAYKDSPEMKSAILQACKTNLQKILDKNLHDGELFHSVLYDYICECSQEDRVDFISILSPLIVPLSNSLPGVNAASMCVWQGTNKDKKTILKVVKEHAIPLKDYCVHSGCQYKDIAKDHWGNMVIHWLVKPKDTAAFHPSLIKFLEDGAKSGTSKKDTEIRVLELREAILPALKKDMETDPKFWLSNKSNMLLAVAVLSIESSKEILHALAKVICETDWHMQVEGKDDTLAIEDAGIHMCLKKLASLDKEKSADTLGEAISEHLNDETIKVWIRTNRGCFFLLKLIESNREEVAKKLKAKLKPHVNILKQQSSEGAKLLLQNVQNK

Uniprot

A0A2A4JDV9   A0A2H1VM78   A0A194QAR9   A0A194QTH1   D0AB89   L7X0R1   + More
S4PGK9   A0A212EP73   A0A0L7LL06   D6WZ15   A0A0T6B3C6   N6U5R4   A0A1Y1MBF6   A0A232EX65   K7J9N0   E2BXL1   V9IFZ9   A0A2A3E3U3   A0A088ALU9   A0A0J7K4J0   A0A154PGZ6   E9IFM9   E2A7S4   A0A0K8USZ1   A0A195DCV3   F4WJT7   A0A3L8DD65   A0A026W9A4   A0A034VQG9   A0A195BCC0   A0A158NS35   A0A195FXT3   A0A2J7QKP0   U5EHI9   A0A1A9WZ92   A0A151WGY7   A0A1B0AIX9   A0A336MGJ9   A0A336MJ44   A0A3L8DD77   W8BH01   A0A067QIM4   A0A1A9UHS6   A0A195BYX8   A0A1L8DGJ9   A0A1B0D4D4   A0A1B0CMH0   A0A1J1J034   A0A0K8WGW0   A0A182H6R2   A0A1I8M975   T1P9Y9   A0A2J7QKP7   A0A1B0G1S7   A0A1I8Q8R4   A0A1S4FNX6   A0A0L0C855   Q16UF7   A0A3Q0IPH3   B4NCP2   A0A1W4VII6   B4JP18   B4MCX2   A0A1S3JCA0   A0A1S3JC21   Q29H32   A0A1S3K9S0   D0QWE7   A0A3B0K6S4   A0A3B0KVM8   A0A1B6L0Z9   A0A2C9JHF8   A0A1Q3EYU5   E9G064   A0A0P5W3J1   A0A0P4YL48   A0A0P6BTP4   A0A0P4ZN88   A0A164U8Z5   A0A0P5SBG7   A0A0P6ERM2  

Pubmed

26354079    23674305    23622113    22118469    26227816    18362917    + More
19820115    23537049    28004739    28648823    20075255    20798317    21282665    21719571    30249741    24508170    25348373    21347285    24495485    24845553    26483478    25315136    26108605    17510324    17994087    15632085    19859648    15562597    21292972   

EMBL

NWSH01001832    PCG69966.1    ODYU01003152    SOQ41542.1    KQ459232    KPJ02633.1    + More
KQ461155    KPJ08300.1    FP102340    CBH09284.1    KC469893    AGC92694.1    GAIX01003617    JAA88943.1    AGBW02013517    OWR43288.1    JTDY01000686    KOB76223.1    KQ971363    EFA09038.1    LJIG01016117    KRT81565.1    APGK01041594    KB740994    KB632255    ENN75986.1    ERL90654.1    GEZM01035601    JAV83159.1    NNAY01001792    OXU22907.1    AAZX01002711    GL451265    EFN79580.1    JR041372    AEY59426.1    KZ288391    PBC26358.1    LBMM01014327    KMQ85219.1    KQ434896    KZC10744.1    GL762880    EFZ20617.1    GL437382    EFN70542.1    GDHF01022839    JAI29475.1    KQ980989    KYN10708.1    GL888186    EGI65579.1    QOIP01000010    RLU18102.1    KK107374    EZA51594.1    GAKP01015149    GAKP01015145    GAKP01015141    JAC43803.1    KQ976528    KYM81867.1    ADTU01024454    KQ981208    KYN44654.1    NEVH01013260    PNF29156.1    GANO01003004    JAB56867.1    KQ983136    KYQ47082.1    UFQT01001175    SSX29325.1    UFQT01001201    SSX29481.1    RLU18103.1    GAMC01010297    GAMC01010295    JAB96258.1    KK853308    KDR08684.1    KQ978457    KYM93817.1    GFDF01008496    JAV05588.1    AJVK01011378    AJVK01011379    AJWK01018717    CVRI01000066    CRL05875.1    GDHF01002204    JAI50110.1    JXUM01114779    JXUM01114780    JXUM01114781    JXUM01114782    JXUM01114783    JXUM01114784    KQ565817    KXJ70629.1    KA644763    AFP59392.1    PNF29155.1    CCAG010007360    JRES01000777    KNC28412.1    CH477622    EAT38180.1    CH964239    EDW82601.2    CH916371    EDV92461.1    CH940660    EDW58044.1    CH379064    EAL31927.2    FJ821026    ACN94646.1    OUUW01000039    SPP89917.1    SPP89916.1    GEBQ01022642    JAT17335.1    GFDL01014579    JAV20466.1    GL732528    EFX87453.1    GDIP01092481    JAM11234.1    GDIP01227270    JAI96131.1    GDIP01025106    JAM78609.1    GDIP01210276    JAJ13126.1    LRGB01001581    KZS11152.1    GDIQ01094329    JAL57397.1    GDIQ01059302    JAN35435.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    UP000007266    + More
UP000019118    UP000030742    UP000215335    UP000002358    UP000008237    UP000242457    UP000005203    UP000036403    UP000076502    UP000000311    UP000078492    UP000007755    UP000279307    UP000053097    UP000078540    UP000005205    UP000078541    UP000235965    UP000091820    UP000075809    UP000092445    UP000027135    UP000078200    UP000078542    UP000092462    UP000092461    UP000183832    UP000069940    UP000249989    UP000095301    UP000092444    UP000095300    UP000037069    UP000008820    UP000079169    UP000007798    UP000192221    UP000001070    UP000008792    UP000085678    UP000001819    UP000268350    UP000076420    UP000000305    UP000076858   

Pfam

PF08144   CPL

Interpro

IPR040059   PUM3        + More
IPR016024   ARM-type_fold       
IPR001313   Pumilio_RNA-bd_rpt       
IPR012959   CPL_dom       
IPR011989   ARM-like       
IPR033133   PUM-HD       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.10.10    

ProteinModelPortal

A0A2A4JDV9   A0A2H1VM78   A0A194QAR9   A0A194QTH1   D0AB89   L7X0R1   + More
S4PGK9   A0A212EP73   A0A0L7LL06   D6WZ15   A0A0T6B3C6   N6U5R4   A0A1Y1MBF6   A0A232EX65   K7J9N0   E2BXL1   V9IFZ9   A0A2A3E3U3   A0A088ALU9   A0A0J7K4J0   A0A154PGZ6   E9IFM9   E2A7S4   A0A0K8USZ1   A0A195DCV3   F4WJT7   A0A3L8DD65   A0A026W9A4   A0A034VQG9   A0A195BCC0   A0A158NS35   A0A195FXT3   A0A2J7QKP0   U5EHI9   A0A1A9WZ92   A0A151WGY7   A0A1B0AIX9   A0A336MGJ9   A0A336MJ44   A0A3L8DD77   W8BH01   A0A067QIM4   A0A1A9UHS6   A0A195BYX8   A0A1L8DGJ9   A0A1B0D4D4   A0A1B0CMH0   A0A1J1J034   A0A0K8WGW0   A0A182H6R2   A0A1I8M975   T1P9Y9   A0A2J7QKP7   A0A1B0G1S7   A0A1I8Q8R4   A0A1S4FNX6   A0A0L0C855   Q16UF7   A0A3Q0IPH3   B4NCP2   A0A1W4VII6   B4JP18   B4MCX2   A0A1S3JCA0   A0A1S3JC21   Q29H32   A0A1S3K9S0   D0QWE7   A0A3B0K6S4   A0A3B0KVM8   A0A1B6L0Z9   A0A2C9JHF8   A0A1Q3EYU5   E9G064   A0A0P5W3J1   A0A0P4YL48   A0A0P6BTP4   A0A0P4ZN88   A0A164U8Z5   A0A0P5SBG7   A0A0P6ERM2  

PDB

4WZW     E-value=7.74832e-39,     Score=405

KEGG

101743438    K14844 pumilio homology domain family member 6 | (RefSeq) protein penguin

GO

GO:0003723   GO:0005730   GO:0005488   GO:0006233   GO:0004535   GO:0005634   GO:0005737   GO:0006402   GO:0046872   GO:0003824  

PANTHER

PTHR13389  

Length:

596

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15473

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01148

outside

1  -  596

 

 

Pi

340.212503

Theta

172.649669

Tajima's D

2.881752

CLR

0.000821

CSRT

0.974401279936003

Interpretation

Uncertain