Gene

KWMTBOMO10142

Pre Gene Modal

BGIBMGA005639

Annotation

PREDICTED:_DNA_fragmentation_factor_subunit_beta_[Amyelois_transitella]

Location

Bomo_Chr17(-):3049351-3050839      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.729

CDS

ATGAAGAAAGGTTATAAAGTGACTGATGTTAAACGCGAAAAGAAAATTGGCGTGGCAGCTGAAAGTTTACACGAGTTGATCGAGAAATCACACAAAAAATTAGAATTCAATGTCAGCTGCGGAGAATGTAATTTATACGTGGCTGAAGATGGGACGCTAGTTGACAATGATGAGTACCTAGCCACTCTGCCACCACAAACCGTCTTCATTTTACTAAAGGGCTCAGAAAAGATGATAACAGATTTTGATTATTATTACAATATGATCCTGTCAACTAAGAAAGAGTACATAGATACAGGAGCAGCAGCCAAGCAGTTTTTATCGACAAACATCAAAGAGAAGTTCAAAGTCTTTCAAAAGTACATTGCAGCTGCTGACGATGCTAGAATAGAGCTCAGCGAGAGAACACAAGATCCAGCTTGGTTTGAAGGTATAATGAAGATTTCCTTATACTTCATTTATTAA

Protein

MKKGYKVTDVKREKKIGVAAESLHELIEKSHKKLEFNVSCGECNLYVAEDGTLVDNDEYLATLPPQTVFILLKGSEKMITDFDYYYNMILSTKKEYIDTGAAAKQFLSTNIKEKFKVFQKYIAAADDARIELSERTQDPAWFEGIMKISLYFIY

Uniprot

H9J7Z7   A0A2H1VMR1   A0A1E1WJU4   A0A194QCC5   A0A194QS01   D0AB91   + More
A0A212EP59   L7X1G4   A0A0L7LGR6   A0A0M9A9K2   V9IAB8   A0A310SHW6   W5JGP2   E0VAJ8   A0A1B6D4X6   A0A1B6CDC6   A0A182NBH5   A0A154PA95   A0A2J7PXZ6   A0A195FWH6   A0A182J889   A0A1B6EA14   A0A182QKM7   A0A182M0H1   A0A182VTZ2   A0A158NN72   A0A2A3EK54   A0A026VZ81   A0A0C9QV11   A0A084VH37   A0A3L8DG10   A0A182R3W6   A0A067QYQ3   F4WNU5   K7J7X5   A0A182K9P8   A0A182F0Q3   A0A182YFV0   A0A2P8ZLG4   A0A182PM90   A0A1B6FSK2   A0A146LJ53   Q7Q1Q3   A0A1B0ETL7   A0A182U7Z1   A0A146LWA4   A0A182XN40   A0A182HI82   N6SU96   U4U402   A0A232FLH6   A0A0T6AZL6   D6WW09   B0WHX2   A0A088ARL5   U5EPW9   Q17BG6   A0A1S4F990   A0A1B6KTR6   A0A182GGF6   A0A023F0S3   A0A224XFN9   A0A0P4VIT5   A0A1Y1KMX5   A0A069DSR6   A0A0V0GEA2   A0A2S2QP19   A0A1Y1KI19   J9KG38   A0A336MRH6   A0A182VLF9   A0A182LM80   A0A3M6UJD4   A0A210QD94   A0A0K8UQ57   A0A034WHR1   K1P4N7   A0A195CRW1   A0A2B4RSP0   A0A0B7BH20   B3MV75   B3NAZ4   B4M987   A0A1W4V726   A0A3B0JZA1   B4P340   A0A0A1XQ30   A0A1S3JSC1   Q9NDR2   B4Q4R0   B4IEI7   Q9V3H0   Q29KJ1   B4JZC1  

Pubmed

19121390    26354079    22118469    23674305    26227816    20920257    + More
23761445    20566863    21347285    24508170    24438588    30249741    24845553    21719571    20075255    25244985    29403074    26823975    12364791    23537049    28648823    18362917    19820115    17510324    26483478    25474469    27129103    28004739    26334808    20966253    30382153    28812685    25348373    22992520    17994087    17550304    25830018    26383154    10777599    22936249    10627165    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28652364    15632085   

EMBL

BABH01020199    ODYU01003152    SOQ41544.1    GDQN01003780    JAT87274.1    KQ459232    + More
KPJ02635.1    KQ461155    KPJ08298.1    FP102340    CBH09286.1    AGBW02013517    OWR43285.1    KC469893    AGC92696.1    JTDY01001151    KOB74728.1    KQ435720    KOX78649.1    JR037944    JR037945    AEY58048.1    AEY58049.1    KQ768821    OAD53042.1    ADMH02001555    ETN62080.1    DS235008    EEB10404.1    GEDC01016571    JAS20727.1    GEDC01026018    JAS11280.1    KQ434856    KZC08761.1    NEVH01020852    PNF21196.1    KQ981208    KYN44781.1    GEDC01002535    JAS34763.1    AXCN02000619    AXCM01005301    ADTU01021102    KZ288222    PBC32088.1    KK107672    EZA48154.1    GBYB01007594    JAG77361.1    ATLV01013130    KE524841    KFB37281.1    QOIP01000008    RLU19344.1    KK852819    KDR15630.1    GL888239    EGI64103.1    PYGN01000023    PSN57344.1    GECZ01016776    JAS52993.1    GDHC01011687    JAQ06942.1    AAAB01008980    EAA14550.4    AJWK01011181    GDHC01006685    JAQ11944.1    APCN01005650    APGK01057068    KB741277    ENN71274.1    KB631617    ERL84705.1    NNAY01000044    OXU31606.1    LJIG01016429    KRT80627.1    KQ971361    EFA08645.1    DS231940    EDS28031.1    GANO01000035    JAB59836.1    CH477322    EAT43578.1    GEBQ01025132    JAT14845.1    JXUM01061637    JXUM01061638    KQ562161    KXJ76541.1    GBBI01003642    JAC15070.1    GFTR01005141    JAW11285.1    GDKW01001791    JAI54804.1    GEZM01083777    JAV61015.1    GBGD01002118    JAC86771.1    GECL01000461    JAP05663.1    GGMS01010274    MBY79477.1    GEZM01083778    GEZM01083776    GEZM01083775    JAV61014.1    ABLF02033238    ABLF02033247    ABLF02033251    UFQT01001034    SSX28558.1    RCHS01001413    RMX53745.1    NEDP02004099    OWF46705.1    GDHF01023603    GDHF01013818    JAI28711.1    JAI38496.1    GAKP01003831    JAC55121.1    JH817690    EKC18587.1    KQ977372    KYN03232.1    LSMT01000368    PFX19275.1    HACG01044741    CEK91606.1    CH902624    EDV33140.1    CH954177    EDV58708.1    CH940654    EDW57763.1    OUUW01000010    SPP85752.1    CM000157    EDW88282.1    GBXI01015825    GBXI01001161    JAC98466.1    JAD13131.1    AB036773    BAA97120.1    CM000361    CM002910    EDX04898.1    KMY90063.1    CH480831    EDW46014.1    AF149797    AE014134    AAF03220.2    AAF53276.1    CH379061    EAL33183.2    CH916379    EDV94043.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000037510    UP000053105    + More
UP000000673    UP000009046    UP000075884    UP000076502    UP000235965    UP000078541    UP000075880    UP000075886    UP000075883    UP000075920    UP000005205    UP000242457    UP000053097    UP000030765    UP000279307    UP000075900    UP000027135    UP000007755    UP000002358    UP000075881    UP000069272    UP000076408    UP000245037    UP000075885    UP000007062    UP000092461    UP000075902    UP000076407    UP000075840    UP000019118    UP000030742    UP000215335    UP000007266    UP000002320    UP000005203    UP000008820    UP000069940    UP000249989    UP000007819    UP000075903    UP000075882    UP000275408    UP000242188    UP000005408    UP000078542    UP000225706    UP000007801    UP000008711    UP000008792    UP000192221    UP000268350    UP000002282    UP000085678    UP000000304    UP000001292    UP000000803    UP000001819    UP000001070   

PRIDE

H9J7Z7    Q9NDR2   

Pfam

PF02017   CIDE-N        + More
PF09230   DFF40
PF05997   Nop52

Interpro

IPR039729   DFF40        + More
IPR003508   CIDE-N_dom       
IPR015311   DFF40_C       
IPR010301   Nop52       

ProteinModelPortal

H9J7Z7   A0A2H1VMR1   A0A1E1WJU4   A0A194QCC5   A0A194QS01   D0AB91   + More
A0A212EP59   L7X1G4   A0A0L7LGR6   A0A0M9A9K2   V9IAB8   A0A310SHW6   W5JGP2   E0VAJ8   A0A1B6D4X6   A0A1B6CDC6   A0A182NBH5   A0A154PA95   A0A2J7PXZ6   A0A195FWH6   A0A182J889   A0A1B6EA14   A0A182QKM7   A0A182M0H1   A0A182VTZ2   A0A158NN72   A0A2A3EK54   A0A026VZ81   A0A0C9QV11   A0A084VH37   A0A3L8DG10   A0A182R3W6   A0A067QYQ3   F4WNU5   K7J7X5   A0A182K9P8   A0A182F0Q3   A0A182YFV0   A0A2P8ZLG4   A0A182PM90   A0A1B6FSK2   A0A146LJ53   Q7Q1Q3   A0A1B0ETL7   A0A182U7Z1   A0A146LWA4   A0A182XN40   A0A182HI82   N6SU96   U4U402   A0A232FLH6   A0A0T6AZL6   D6WW09   B0WHX2   A0A088ARL5   U5EPW9   Q17BG6   A0A1S4F990   A0A1B6KTR6   A0A182GGF6   A0A023F0S3   A0A224XFN9   A0A0P4VIT5   A0A1Y1KMX5   A0A069DSR6   A0A0V0GEA2   A0A2S2QP19   A0A1Y1KI19   J9KG38   A0A336MRH6   A0A182VLF9   A0A182LM80   A0A3M6UJD4   A0A210QD94   A0A0K8UQ57   A0A034WHR1   K1P4N7   A0A195CRW1   A0A2B4RSP0   A0A0B7BH20   B3MV75   B3NAZ4   B4M987   A0A1W4V726   A0A3B0JZA1   B4P340   A0A0A1XQ30   A0A1S3JSC1   Q9NDR2   B4Q4R0   B4IEI7   Q9V3H0   Q29KJ1   B4JZC1  

PDB

5XPC     E-value=8.94848e-11,     Score=155

KEGG

101743718    K02311 DNA fragmentation factor, 40 kD, beta subunit [EC:3.-.-.-] | (RefSeq) DNA fragmentation facto

GO

GO:0004536   GO:0006309   GO:0005634   GO:0005737   GO:0016021   GO:0006915   GO:0000790   GO:0006364   GO:0030688   GO:0005622   GO:0006468   GO:0004535   GO:0003723   GO:0006402   GO:0046872   GO:0003824  

PANTHER

PTHR13067  

Length:

154

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0024

Exp number, first 60 AAs:

0.00012

Total prob of N-in:

0.50196

inside

1  -  154

 

 

Pi

371.261725

Theta

150.598483

Tajima's D

4.651286

CLR

44.477326

CSRT

0.99990000499975

Interpretation

Uncertain