Gene

KWMTBOMO10128  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005648

Annotation

Similar_to_CG4692_[Heliconius_melpomene]

Location

Bomo_Chr17(-):2811198-2812349      View in EpiBrowser

Full name

Putative ATP synthase subunit f, mitochondrial      

Location in the cell

Mitochondrial   Reliability : 2.408

CDS

ATGGCTTTCGGTGATTACCCCAAGGAGTATAATCCTGCTGTACATGGGCCTTACGATCCTGCACGCTACTATGGAAAACCTGATACTCCATTCAGTCAGTTGAAGCTGAACGAAATCGGTTCGTGGTTCGGTCGCCGCAGCAAGACTCCGTCTGCCGTGGCCGGAGCTTTCAGTCGAGCCTGGTGGAGATGGCAACATAAGTACGTACAACCTAAGAAGGTTGGCATGGCTCCATTCTATCAACTACTCGTTGGCAGCATGGTCTTCTTCTATGCCATCAACTATGGAAGAATTAAGCACCACAAGAACTACAAATACCACTAA

Protein

MAFGDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNYKYH

Description

Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain. Minor subunit located with subunit a in the membrane (By similarity).

Subunit

F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(0) seems to have nine subunits: a, b, c, d, e, f, g, F6 and 8 (or A6L) (By similarity).

Similarity

Belongs to the ATPase F chain family.

Keywords

Alternative splicing   ATP synthesis   Complete proteome   Hydrogen ion transport   Ion transport   Membrane   Mitochondrion   Reference proteome   Transport  

Feature

chain  Putative ATP synthase subunit f, mitochondrial
splice variant  In isoform B.

Uniprot

L7X0S3   D0AB75   I4DK72   H9J806   A0A194QS47   A0A2H1X381   + More
A0A2A4JHT3   A0A1E1WAH0   A0A194QGP8   U5EZG0   A0A182YPR7   T1GFI1   A0A182MB01   A0A182QWK6   T1PHQ3   A0A0K8TSU5   A0A182RJV0   A0A182WAY1   A0A1A9VU72   A0A1B0AF80   A0A182SSR1   A0A1L8E0A7   Q1HRJ7   A0A182PUS2   A0A1A9XPT4   A0A1B0BRL6   A0A1A9X4V4   A0A067R7N7   A0A336JVX2   B4LJI2   V5GXI9   C6ZQT5   A0A1L8EFK9   A0A182JLI5   A0A212FKP6   A0A2M4A5B9   A0A2M4C557   W5JQR1   B8RJ20   A0A3B0JRI7   T1D5H4   A0A182IGF7   A0A2M3Z0R8   B4MP00   B5RJ63   A0A1W4WCK4   Q6XI17   Q9W141   W8CDF0   A0A1B0G437   A0A0L0C0Z6   B4J809   B0WDF3   B4KQ55   B4H565   T1DHH4   B4IH47   B4QCG5   Q28X92   A0A1I8M533   A0A182XT52   Q7QLC5   A0A0C9RRE6   B3NQV2   B3MG91   A0A023ECZ6   A0A034WWD1   A0A1I8PV83   A0A0A1XR83   A0A0A1WMS9   A0A0K8W557   A0A293MUV9   A0A1J1IH77   A0A182NQ92   Q9W141-2   A0A1B0CFL2   A0A2J7RIS2   A0A2M4B0E3   A0A2R5LEX6   A0A0K8ULD5   A0A2H8TX46   A0A0T6B3W9   B5U263   A0A195EW94   R4G5B0   B5U240   B5U249   A0A0A9YI81   A0A146LF38   B5U218   B5U217   B5U235   A0A2I9LNS8   Q201W3   A0A1W4WV18   J3JV39   A0A151X1X8   Q09JM8   D6WX58   R4WQJ6  

Pubmed

23674305    22651552    19121390    26354079    25244985    26369729    + More
17204158    24845553    17994087    20496585    22118469    20920257    23761445    24330624    14525923    17550304    10731132    12537572    12537569    24495485    26108605    18057021    22936249    15632085    25315136    9087549    12364791    14747013    17210077    24945155    26483478    25348373    25830018    20087394    25401762    26823975    20075255    29248469    22516182    23537049    18070664    18362917    19820115    23691247   

EMBL

KC469893    AGC92709.1    FP102339    CBH09270.1    AK401690    BAM18312.1    + More
BABH01020219    KQ461155    KPJ08312.1    ODYU01013053    SOQ59708.1    NWSH01001365    PCG71531.1    GDQN01010646    GDQN01007054    JAT80408.1    JAT84000.1    KQ459232    KPJ02621.1    GANO01000864    JAB59007.1    CAQQ02393081    AXCM01004513    AXCN02001889    KA647418    AFP62047.1    GDAI01000171    JAI17432.1    GFDF01001977    JAV12107.1    DQ440097    ABF18130.1    JXJN01019147    KK852652    KDR19410.1    UFQS01000003    UFQT01000003    SSW96774.1    SSX17161.1    CH940648    EDW61550.1    GALX01001979    JAB66487.1    EZ114886    ACU30939.1    GFDG01001456    JAV17343.1    AXCP01007179    AGBW02008005    OWR54314.1    GGFK01002620    MBW35941.1    GGFJ01010977    MBW60118.1    ADMH02000608    ETN65643.1    EZ000445    ACJ64319.1    OUUW01000001    SPP73748.1    GALA01000508    JAA94344.1    APCN01008223    GGFM01001354    MBW22105.1    CH963848    EDW73839.1    BT044337    ACH92402.1    AY232015    CM000158    AAR10038.1    EDW92569.1    AE013599    AY060738    BT025808    BT030456    GAMC01002061    JAC04495.1    CCAG010002612    JRES01001049    KNC25965.1    CH916367    EDW02239.1    DS231897    EDS44524.1    CH933808    EDW09183.2    KRG04509.1    CH479210    EDW32901.1    GAMD01002341    JAA99249.1    CH480838    EDW49223.1    CM000362    CM002911    EDX08581.1    KMY96383.1    CM000071    EAL26424.1    AAAB01007639    EAA03027.1    GBYB01009906    JAG79673.1    CH954179    EDV57035.1    CH902619    EDV37794.1    JXUM01149425    GAPW01006341    GAPW01006340    KQ570772    JAC07257.1    KXJ68304.1    GAKP01000844    JAC58108.1    GBXI01000815    JAD13477.1    GBXI01014559    JAC99732.1    GDHF01012957    GDHF01006088    JAI39357.1    JAI46226.1    GFWV01019895    MAA44623.1    CVRI01000047    CRK98390.1    AJWK01010169    AJWK01010170    NEVH01003493    PNF40738.1    GGFK01013121    MBW46442.1    GGLE01003958    MBY08084.1    GDHF01024807    JAI27507.1    GFXV01006694    MBW18499.1    LJIG01009932    KRT82092.1    FJ158240    FJ158241    FJ158242    FJ158243    FJ158244    FJ158245    GQ336322    GQ336323    GQ336324    GQ336325    GQ336326    ACH99579.1    ACH99580.1    ACH99581.1    ACH99582.1    ACH99583.1    ACH99584.1    ACU11636.1    ACU11637.1    ACU11638.1    ACU11639.1    ACU11640.1    KQ981954    KYN32162.1    GAHY01000101    JAA77409.1    FJ158217    FJ158221    FJ158223    GQ336320    GQ336321    ACH99556.1    ACH99560.1    ACH99562.1    ACU11634.1    ACU11635.1    FJ158226    FJ158227    FJ158228    FJ158229    FJ158230    FJ158231    FJ158232    FJ158233    FJ158234    FJ158235    FJ158236    FJ158237    FJ158238    FJ158239    ACH99565.1    ACH99566.1    ACH99567.1    ACH99568.1    ACH99569.1    ACH99570.1    ACH99571.1    ACH99572.1    ACH99573.1    ACH99574.1    ACH99575.1    ACH99576.1    ACH99577.1    ACH99578.1    GBHO01010832    JAG32772.1    GDHC01013027    JAQ05602.1    FJ158195    FJ158202    FJ158204    FJ158208    FJ158209    FJ158210    FJ158211    GU201928    ACH99534.1    ACH99541.1    ACH99543.1    ACH99547.1    ACH99548.1    ACH99549.1    ACH99550.1    ACZ95802.1    FJ158194    FJ158196    FJ158197    FJ158198    FJ158199    FJ158200    FJ158201    FJ158203    FJ158205    FJ158206    FJ158207    ACH99533.1    ACH99535.1    ACH99536.1    ACH99537.1    ACH99538.1    ACH99539.1    ACH99540.1    ACH99542.1    ACH99544.1    ACH99545.1    ACH99546.1    FJ158212    FJ158213    FJ158214    FJ158215    FJ158216    FJ158218    FJ158219    FJ158220    FJ158222    FJ158224    FJ158225    ACH99551.1    ACH99552.1    ACH99553.1    ACH99554.1    ACH99555.1    ACH99557.1    ACH99558.1    ACH99559.1    ACH99561.1    ACH99563.1    ACH99564.1    GFWZ01000051    MBW20041.1    ABLF02027176    DQ413223    AK340420    ABD72691.1    BAH71034.1    APGK01044595    BT127105    KB741027    KB632186    AEE62067.1    ENN74885.1    ERL89730.1    KQ982585    KYQ54194.1    DQ886818    ABI52735.1    KQ971361    EFA09167.1    AK416962    BAN20177.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000076408    UP000015102    + More
UP000075883    UP000075886    UP000075900    UP000075920    UP000078200    UP000092445    UP000075901    UP000075885    UP000092443    UP000092460    UP000091820    UP000027135    UP000008792    UP000075880    UP000007151    UP000000673    UP000268350    UP000075840    UP000007798    UP000192221    UP000002282    UP000000803    UP000092444    UP000037069    UP000001070    UP000002320    UP000009192    UP000008744    UP000001292    UP000000304    UP000001819    UP000095301    UP000076407    UP000007062    UP000008711    UP000007801    UP000069940    UP000249989    UP000095300    UP000183832    UP000075884    UP000092461    UP000235965    UP000078541    UP000002358    UP000007819    UP000192223    UP000019118    UP000030742    UP000075809    UP000007266   

PRIDE

H9J806    B5RJ63    Q9W141   

Pfam

PF10206   WRW        + More
PF00202   Aminotran_3
PF12755   Vac14_Fab1_bd

Interpro

IPR019344   F1F0-ATPsyn_F_prd        + More
IPR015424   PyrdxlP-dep_Trfase       
IPR015421   PyrdxlP-dep_Trfase_major       
IPR005814   Aminotrans_3       
IPR015422   PyrdxlP-dep_Trfase_dom1       
IPR004631   4NH2But_aminotransferase_euk       
IPR011989   ARM-like       
IPR032878   Vac14_Fab1-bd       
IPR016024   ARM-type_fold       

SUPFAM

SSF53383   SSF53383        + More
SSF48371   SSF48371       

Gene 3D

3.40.640.10     3.90.1150.10     1.25.10.10    

CDD

cd00610  OAT_like

ProteinModelPortal

L7X0S3   D0AB75   I4DK72   H9J806   A0A194QS47   A0A2H1X381   + More
A0A2A4JHT3   A0A1E1WAH0   A0A194QGP8   U5EZG0   A0A182YPR7   T1GFI1   A0A182MB01   A0A182QWK6   T1PHQ3   A0A0K8TSU5   A0A182RJV0   A0A182WAY1   A0A1A9VU72   A0A1B0AF80   A0A182SSR1   A0A1L8E0A7   Q1HRJ7   A0A182PUS2   A0A1A9XPT4   A0A1B0BRL6   A0A1A9X4V4   A0A067R7N7   A0A336JVX2   B4LJI2   V5GXI9   C6ZQT5   A0A1L8EFK9   A0A182JLI5   A0A212FKP6   A0A2M4A5B9   A0A2M4C557   W5JQR1   B8RJ20   A0A3B0JRI7   T1D5H4   A0A182IGF7   A0A2M3Z0R8   B4MP00   B5RJ63   A0A1W4WCK4   Q6XI17   Q9W141   W8CDF0   A0A1B0G437   A0A0L0C0Z6   B4J809   B0WDF3   B4KQ55   B4H565   T1DHH4   B4IH47   B4QCG5   Q28X92   A0A1I8M533   A0A182XT52   Q7QLC5   A0A0C9RRE6   B3NQV2   B3MG91   A0A023ECZ6   A0A034WWD1   A0A1I8PV83   A0A0A1XR83   A0A0A1WMS9   A0A0K8W557   A0A293MUV9   A0A1J1IH77   A0A182NQ92   Q9W141-2   A0A1B0CFL2   A0A2J7RIS2   A0A2M4B0E3   A0A2R5LEX6   A0A0K8ULD5   A0A2H8TX46   A0A0T6B3W9   B5U263   A0A195EW94   R4G5B0   B5U240   B5U249   A0A0A9YI81   A0A146LF38   B5U218   B5U217   B5U235   A0A2I9LNS8   Q201W3   A0A1W4WV18   J3JV39   A0A151X1X8   Q09JM8   D6WX58   R4WQJ6  

KEGG

101744632    K02130 F-type H+-transporting ATPase subunit f | (RefSeq) putative ATP synthase subunit f, mitochond

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:1902600   GO:0000276   GO:0005739   GO:0006754   GO:0003867   GO:0009448   GO:0030170  

PANTHER

PTHR13080  

Subcellular location

Mitochondrion membrane  

Length:

107

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.25672

Exp number, first 60 AAs:

0.00871

Total prob of N-in:

0.04010

outside

1  -  73

TMhelix

74  -  96

inside

97  -  107

 

 

Pi

186.168416

Theta

155.0938

Tajima's D

-0.6321

CLR

0.137563

CSRT

0.214339283035848

Interpretation

Uncertain