Gene

KWMTBOMO10123

Annotation

PREDICTED:_uncharacterized_protein_LOC106126637_[Papilio_xuthus]

Location

Bomo_Chr17(-):2762461-2763589      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.272

CDS

ATGCAAATGCATACTCGAGCTCTGTCGGAACAGCTGGAGAAAACCCCTCTCTACGCCGCAGGACATGGGTCATTAGATGAACACAGCCAACTCTTAAAGGAAAACAAAGAAGAAATAGAAAAACTAAGTGAAGAAATAAAAAAGCAAAGGACAGAATGGAAAGAAAATAGGAGCTACGCAAGCGTTGTCAGTGGCACAAAGGAGAAAGAACGCGGAAATGCGGAGATGCATTCCGTCGTGATCTCCTCAGACGACCAGAATGCCACAGGGGAAGACGTATTTAATAAGATCAGGTCAACCCTCAACGCTAAAGAGGAAGGGATAAAAATAGACAGGATAAGAAAGGTGAAAGATAGAAAAGTTATAGTCGGCTGTGAATCGAAAGAAGAATTAGTAAAAATAAGAGAAACAATTAAAACAAAGGGAAAGGACTTACACCTCCAGGAGATAAGAAATAAGGAACCCATGGTACAATTGAAGGATGTCCTGAATTATAATAAGGACGAAGATATAGTGCGAGCACTAATTAACCAGAACAAACATCTTCTGGGGGATGTGAGTGTGGACAGCTCAACTCTGAAGGTAAAGTTCAGAAGAAGAGCTAGAAACCCGCTCACATCCCATGTGGCAATACAAGTGCCACCAAAACTATGGAAGCGGCTCACGGAGGCGGGGCTAGTCCATATAGATGTGCAAAGGGTTAGGGTAGAGGATCAGTCTCCCCTGATTCAGTGCTCGCGATGCTTGGGATATGGCCACGGGAAGCGGTTCTGCCGGGAAAAAATTGACGCCTGCAGTCACTGCGGAGAGGCGCATCATAGGTCGGAATGCGCTGACTGGATGGCGAGGGTGCCTCCGTCGTGCTGTAACTGCTTGAAGGCTAAAATCGGTGAAGCCGAGCATAATGCCTTTAGCCCAGAGTGTCCAGTAAGGAAGAGGTGGGAAACCTTGGCAAGATCTACCGTGACTTATTGCTAA

Protein

MQMHTRALSEQLEKTPLYAAGHGSLDEHSQLLKENKEEIEKLSEEIKKQRTEWKENRSYASVVSGTKEKERGNAEMHSVVISSDDQNATGEDVFNKIRSTLNAKEEGIKIDRIRKVKDRKVIVGCESKEELVKIRETIKTKGKDLHLQEIRNKEPMVQLKDVLNYNKDEDIVRALINQNKHLLGDVSVDSSTLKVKFRRRARNPLTSHVAIQVPPKLWKRLTEAGLVHIDVQRVRVEDQSPLIQCSRCLGYGHGKRFCREKIDACSHCGEAHHRSECADWMARVPPSCCNCLKAKIGEAEHNAFSPECPVRKRWETLARSTVTYC

Uniprot

A0A194QQW8   H9JG79   Q9BLI5   Q93138   A0A0L7LBB4   A0A2H1WF63   + More
A0A212EIV6   A0A2P8XUI0   A0A0K1IJN6   A0A0J7KI20   A0A2P8XUB6   A0A2P8ZKU7   A0A0A9XB35   D6WYM0   A0A2W1BMW2   A0A1B6KV32   A0A2A4K9E8   A0A2W1BG99   A0A355A924   Q5NTZ1   A0A087U2L8   V9H0F3   Q7M3N5   A0A0A9VUJ5   A0A2H1VP52  

Pubmed

26354079    19121390    11319268    7623845    26227816    22118469    + More
29403074    25401762    18362917    19820115    28756777    30148503    15814816    2447482   

EMBL

KQ461198    KPJ05926.1    BABH01002157    AB046668    BAB21511.1    D38414    + More
BAA07466.1    JTDY01001935    KOB72511.1    ODYU01008279    SOQ51725.1    AGBW02014565    OWR41401.1    PYGN01001327    PSN35652.1    KP771712    AKU04649.1    LBMM01007077    KMQ90063.1    PYGN01001334    PSN35596.1    PYGN01000027    PSN57126.1    GBHO01026738    GBHO01026737    JAG16866.1    JAG16867.1    KQ971357    EFA08428.1    KZ150016    PZC74965.1    GEBQ01024677    JAT15300.1    NWSH01000031    PCG80518.1    KZ150113    PZC73311.1    DNYW01000024    HBK70178.1    AB182560    BAD82945.1    KK117863    KFM71607.1    M19755    AAC13648.1    GBHO01045706    JAF97897.1    ODYU01003604    SOQ42577.1   

Proteomes

UP000053240    UP000005204    UP000037510    UP000007151    UP000245037    UP000036403    + More
UP000007266    UP000218220    UP000054359   

PRIDE

H9JG79    Q9BLI5    Q93138    Q5NTZ1    V9H0F3    Q7M3N5    + More

Pfam

PF14529   Exo_endo_phos_2        + More
PF00075   RNase_H
PF00078   RVT_1
PF01826   TIL

Interpro

IPR036691   Endo/exonu/phosph_ase_sf        + More
IPR012337   RNaseH-like_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR000477   RT_dom       
IPR036397   RNaseH_sf       
IPR002156   RNaseH_domain       
IPR002919   TIL_dom       
IPR036084   Ser_inhib-like_sf       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       

SUPFAM

SSF56219   SSF56219        + More
SSF53098   SSF53098       
SSF57567   SSF57567       
SSF57756   SSF57756       

Gene 3D

3.30.420.10     3.60.10.10    

ProteinModelPortal

A0A194QQW8   H9JG79   Q9BLI5   Q93138   A0A0L7LBB4   A0A2H1WF63   + More
A0A212EIV6   A0A2P8XUI0   A0A0K1IJN6   A0A0J7KI20   A0A2P8XUB6   A0A2P8ZKU7   A0A0A9XB35   D6WYM0   A0A2W1BMW2   A0A1B6KV32   A0A2A4K9E8   A0A2W1BG99   A0A355A924   Q5NTZ1   A0A087U2L8   V9H0F3   Q7M3N5   A0A0A9VUJ5   A0A2H1VP52  

KEGG

NA   

GO

GO:0004523   GO:0003676   GO:0008270  

Length:

325

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03538

outside

1  -  325

 

 

Pi

197.731203

Theta

50.268899

Tajima's D

4.914501

CLR

6.465269

CSRT

0.999950002499875

Interpretation

Possibly Balancing Selection