Silkworm Genome Informatics Database

Gene

KWMTBOMO10120

Pre Gene Modal

BGIBMGA003203

Annotation

blastopia_polyprotein_[Lasius_niger]

Location

Bomo_Chr17(+):2497555-2501414 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.514

CDS

ATGGCAAGACGACGATCAAAAAGCCAGTCCTTCGATGACGACGACAGTATTTTCGATCGACCAACGCGTGGTGGAATGTTTCACTTAACGGAGAATATCATCAGGAAGTTTGACGGCAAAGACAAAACTTATGCTGTAACAAAGTGGATACAAGATATAGAGGAAAATGGTGACATATTCGAGTGGACACCAAAGCAACGGTTATTAGTGGCTCGACGGTCATTAACCGGCACGGCAGCTTTGTGGTTAAATTCTGAAAAAACGTTTCCATGCTGGGATACTTTAAAGATAGCCATCAGTAAGGAGTTCCCTGACACCATAGACGCCAAGACTATTCACGAAATGATGAGTGCTAAAAAGAAAAAGTCAAATGAATCATGCATTGACTACATGTTTGCCATGAAAGAGCTTGGACGCCGAGGCAAAATGGCGGACTACGTGGCTATAAAATATGTTGTAGATGGCATACAAGATCAAGAAATAAATAAAATAATGCTATATGGAGTCACAACGTACGCTGAATTAAAGGAGAAATTAAAAATATACGAGATTTTGAAAGAAAAAATGAAGAAAGAACCTATTCACGGAAAAGAGCAGAAAATTACTAATACAAGAGAATGGTCATCAAAAGTTCGATGTTATAGCTGTGGAGAAAAGAGTCATAAAAGTGAAGATTGCCCGAAAAAGATGCAAGGAAAAAAGTGTTTCAACTGCAACGTGTTCGGCCATATTTCTTCACAATGTCCGGCAAAGGCGGAAGCGTCATCGGCTACGGCTAGCAGCGCGAGAACAGAGCAGCAACCGAAACGCACGTATATCGCTACGACGCAGGAGGGCGCGAACACAATTTTCGAAAATCAATCTAACGAAGTTCACAACGCTATGAATGCTGTGATTGGCTCTGCGAACAGTACGGTGCGCGACAAATGTCATAACAGTGAGGTTGACATTTTAAAAGTAAATAAAGAATGTAAAGTGTTGAAAAAAACTTTGAAATTAGTAAAATTGTGTAATAATAACGAAATTCATGCATTAATTGATACTGGTAGTGAAGTTAATTTAGTAACCATGGACTATTATGAGCAAATAGGCTCTCCGACGTGTTTTAAAAATGTAAACACAGTTCTTACCGGTTTAGGCTCATCAAAGGTAATATCAACTGAACAATTTAAAACAAACATTGAAATCGACGGCTACACGTATCGTGATATAATATTTTATGTGATTCCTAGAGACAGTATACCTATTAAAGTGATATTGGGACATGAATTTTTAAGAAATGTTATTACAGTTATGAAAGATGGTTTGGTATGGATGAAACCAAATGATTGGTTGTTTAAGGTAAATTGTTTTCCATGTTCTATTGACATTGTAGGTCATGTTATGAATGAAAATGTGAGGAATGAAGTGACTAGGTTAGTAGATGAATATCGGCCATGTCAAACTAAAGAGGCTCCCATTGAGTTGAAAATCACACTTAAAGACGACATCCCAGTGGCTCAACGACCACGACGCATCTCACCAAAAGAACAGGATGAGGTAGATAAACAGGTTAAGGAGTGGCTGGAACAAGGAGTTATTCGGGTAAGCTTTTCTGAATATACTAGCCCAATTGTTCTTGTCAGAAAGGATAAGCAGTTTGAATTTAACAATGAACATAGATTAGTTTTCAATATGCTTAAGGAAAAGTTGACCAGTAATCCTGTATTGAAAATTTATGAACCAAAAGCAGAAACAGAACTTCATACAGATGCCTCAAGTATAGCATATGCGGCTATATTATTACAGAAAGATGACAACAGTGAACTACATCCAGTACATTATATGAGCAAGCGAACAACTGACGCTGAGAGTAAATATACAAGTTATGAGCTAGAAGCTTTGGCTATAATAGAAGGTATAAAGAAGTTTAGACATTATTTATACGGAAAGCATTTTAAGATAGTTACAGACTGCAAAGCTTTTCAAATGACACTGAATAAAAAAGATCTAGCAATGAGTACGAGAGTGGCACGATGGATATTGTTCTTACAAGATTATGATTTCACTATTGAACATCGTGAAGGTTCGAAGATGAAACACACAGATGCTCTAAGCCGAAACCCATATGTAGCTCTTATATTTTCAGACCTACATAGTGATTTAAGACGTGCGCAAGAGAGTGACAACGGATTAAATGCAATTATAAATATTCTGAGAGATGGTAAACTATATAATGACTTTTATTTGCAAGGATTACTCTGCAAGGGACCACAACATTGTTTGGTTGTACCACAGAAGATGGAAATTGAAATTATTAAGAGGGCGCATGATAATGGTCATTTTTCAAAGAAGAAAACATTGGAATTGATTAATAAGGATTATTACATACCAAAATTAGAGAAAAAGATTGAGGATTATATTGCTACATGCATACCTTGTCTGTTAGCATCCCGTAAAGAAGGTAAACGAGAAGGATTTTTGAATCCCATAGAAAAGGGTGACACACCATTACATACACTTCACCTGGACCACATTGGACCACTTACGGAGACACGTAAGCAATATAATTACATATTGACTATTGTTGACGCATTCACCAAGTTTGTATGGTTGTTCCCTACAAAGAGTACATCTACCCAAGAAGTGTTAAATAAGCTGGAAATACATCAACAAGTATTTGGTAATCCTATAAGAATTATTTCAGATAGAGGGACTGCATTTACGAGTAACGATTTTGCACAGTACTGTAAAGAGGAAGAAATAGAGCATGTAAAAATAACAACAGGGGTTCCCAGAGGAAACGGTCAGGTTGAAAGGGTTCATAGAACAATAATTTCAGTACTGACAAAACTTTCAGTTGAGAAACCTACATTGTGGTATAAGTTGGTAAGCAGAGTTCAAAGAGCACTCAACAGTACTTACCACAGGAGTATAAATAGTACCCCATTTCAATTACTCTTTGGAATAAAAATGAAGAGGAAAGAAGATATTCAATTACTGGACCTTTTGATGGAAGAAGAAAGACACAATTTCATTGACAGTAGAGAAGAACTTAGGAAGGAAGCGAAGAAACAAATATTTAAAGTACAAGAAGAAAATAGAAGAAATTACAACAAGAAAATGAAAGAATGTACTATATACAAGGAAGGCGACTTAGTAGCTGTGAAAAGGACTCAGTTTGGTACAGGAATGAAACTGAAACCAAAGTTTTTGGGACCATATCGAATAGTAAAGGTCAAAAGAAAGAATAGATACAATGTTGAGAAGGCTGACGCACAAGTTGAAGGCCCTAACAAGACTACTACATCTGCTGATTTTATGAAAAAGTGGCCTGATTACTTAAGTGACTGA

Protein

MARRRSKSQSFDDDDSIFDRPTRGGMFHLTENIIRKFDGKDKTYAVTKWIQDIEENGDIFEWTPKQRLLVARRSLTGTAALWLNSEKTFPCWDTLKIAISKEFPDTIDAKTIHEMMSAKKKKSNESCIDYMFAMKELGRRGKMADYVAIKYVVDGIQDQEINKIMLYGVTTYAELKEKLKIYEILKEKMKKEPIHGKEQKITNTREWSSKVRCYSCGEKSHKSEDCPKKMQGKKCFNCNVFGHISSQCPAKAEASSATASSARTEQQPKRTYIATTQEGANTIFENQSNEVHNAMNAVIGSANSTVRDKCHNSEVDILKVNKECKVLKKTLKLVKLCNNNEIHALIDTGSEVNLVTMDYYEQIGSPTCFKNVNTVLTGLGSSKVISTEQFKTNIEIDGYTYRDIIFYVIPRDSIPIKVILGHEFLRNVITVMKDGLVWMKPNDWLFKVNCFPCSIDIVGHVMNENVRNEVTRLVDEYRPCQTKEAPIELKITLKDDIPVAQRPRRISPKEQDEVDKQVKEWLEQGVIRVSFSEYTSPIVLVRKDKQFEFNNEHRLVFNMLKEKLTSNPVLKIYEPKAETELHTDASSIAYAAILLQKDDNSELHPVHYMSKRTTDAESKYTSYELEALAIIEGIKKFRHYLYGKHFKIVTDCKAFQMTLNKKDLAMSTRVARWILFLQDYDFTIEHREGSKMKHTDALSRNPYVALIFSDLHSDLRRAQESDNGLNAIINILRDGKLYNDFYLQGLLCKGPQHCLVVPQKMEIEIIKRAHDNGHFSKKKTLELINKDYYIPKLEKKIEDYIATCIPCLLASRKEGKREGFLNPIEKGDTPLHTLHLDHIGPLTETRKQYNYILTIVDAFTKFVWLFPTKSTSTQEVLNKLEIHQQVFGNPIRIISDRGTAFTSNDFAQYCKEEEIEHVKITTGVPRGNGQVERVHRTIISVLTKLSVEKPTLWYKLVSRVQRALNSTYHRSINSTPFQLLFGIKMKRKEDIQLLDLLMEEERHNFIDSREELRKEAKKQIFKVQEENRRNYNKKMKECTIYKEGDLVAVKRTQFGTGMKLKPKFLGPYRIVKVKRKNRYNVEKADAQVEGPNKTTTSADFMKKWPDYLSD

Uniprot

NA

ProteinModelPortal

NA

PDB

3S3O E-value=3.39419e-35, Score=376

KEGG

105842320 no KO assigned | (RefSeq) uncharacterized LOC105842320

GO

GO:0003676 GO:0008270 GO:0015074 GO:0004553 GO:0005737 GO:0008152 GO:0016301 GO:0016773 GO:0016155 GO:0003824

Length:

1110

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00714999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00024

outside

1 - 1110

Pi

164.853264

Theta

144.669854

Tajima's D

0.083604

CLR

208.272525

CSRT

0.389680515974201

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree