Gene

KWMTBOMO10114  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005656

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_probable_enoyl-CoA_hydratase?_mitochondrial_[Bombyx_mori]

Location

Bomo_Chr17(-):2394025-2401244      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.349 Mitochondrial   Reliability : 1.813

CDS

ATGGCTTCTGTCGCTACTGTAACTCGTGCTTTGCTGGGAAAGAATGTACTGAACAAGTGCAAAGTGGTATCCGCAACAAGCCAAGCATCCATAAAGTTTTATAGCACAGCATCATACGAGAACATCAAGGTTGAGGTGGTCGGCTCCAAGAAGAATGTCGGACTCATTCAGTTAAACCGCCCAAAGGCACTGAATGCTCTATGCAAACCATTGTTTGTCGAACTCGGGAAGGCAGTCAATGATTTTGACGCCGACAGCAACATTGCTGCCATCATCATCACTGGTAACGAGAAGGCGTTTGCGGCTGGTGCTGATATTAAGGAGATGCAAAACAATACATACAGCAGCAACACAAAACAGGGTTTCCTTCGTGAATGGGAGGACATCTCCAACTGTGGGAAGCCCATCATTGCCGCTGTTAATGGTTTCGCTCTTGGAGGTGGTTGTGAGCTGGCAATGCTGTGCGATATCATCTATGCCGGCGAAAAGGCGAAATTCGGTCAGCCCGAGATCAACATTGGCACCATCCCCGGAGCCGGAGGCACCCAGCGTCTTCCCAGATACGTTGGCAAGTCGAAAGCAATGGAGATCGTGTTGACAGGAAACTTCTTTGATGCTCATGAAGCCGAGAAAATGGGTCTTGTCAGTAAAGTATTCCCAGTGGAAAAACTTTTAGAAGAAACCATCAAGCTGGCTGAAAGGATCGGAACCCACTCCCCGTTAATTGTGAAGTTGGCCAAACAAGCTGTGAACCAAGCTTACGAGACCACCCTCAAATCGGGCTTGCAGTTTGAGAAGTCCACCTTCTATGGAACCTTTGCTACGGAGGACCGCAAAGAAGGTATGACAGCATTTGTTGAAAAGAGACCACCGAATTTCAAGAATGAATAA

Protein

MASVATVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKNE

Similarity

Belongs to the enoyl-CoA hydratase/isomerase family.

Uniprot

Q2F6B0   H9J814   Q2F6A8   Q2F6A9   A0A194QS26   E3UKK2   + More
I4DJI9   A0A173FD02   A0A2H1VHS6   A0A068FKE8   S4NN34   A0A3S2LI98   C9S271   A0A212EI85   A0A194QB04   A0A2A4JL94   T1HHP0   A0A0P4W0W1   A0A0K8SBL7   A0A224XH30   A0A034W116   A0A2J7QWJ0   A0A336LU75   A0A069DYG6   W8CCC7   A0A0K8W2I4   A0A026WU20   E9IFF6   A0A1B0BU54   A0A0L7QSR6   A0A1A9YQW0   R4UK97   A0A310SIJ1   A0A023F444   A0A2H8THN2   J9JM53   B4KPW3   A0A0T6AT52   A0A0L7L2P9   D3TLZ0   A0A1B0A212   A0A1L8EEE8   A0A2S2N943   A0A240SWV2   A0A1A9WWH4   A0A0M4EW24   A0A1A9VW65   A0A1Y1LVP8   A0A1B6DFI9   A0A1B6FIZ5   A0A1B6KZE3   A0A1B6K254   D6WVI1   T1PAX8   A0A1I8NEK3   B4LKU0   A0A161TEE0   A0A1I8NLM6   A0A067RFD5   A0A154PBQ9   B4N5T9   B4J590   A0A0C9RFS2   A0A087ZNZ9   A0A3B0J497   A0A1W4VGL7   A0A1B0GMB5   E1ZZT3   A0A023EPZ2   Q17E10   N6TS11   V5G4I9   N6V8P2   Q7JR58   A0A195DGC1   U4UPJ9   A0A151WRH8   A0A1J1J7S6   J3JZ61   A0A232EUV8   A0A151IEI5   B3NRG4   A0A182P7I3   B4P459   B4QEU7   B4HQX7   A0A182IXQ9   B3MHF0   A0A195BLZ8   A0A182RYX9   A0A182T3X7   F4WWF1   A0A182W1Y1   A0A182YLA3   A0A2C9K292   A0A0J9RC54   A0A158NKM0   A0A195FBN0   A0A182GCY2   A0A182N3W7  

Pubmed

19121390    26354079    22651552    27251284    26385554    23622113    + More
22118469    27129103    26823975    25348373    26334808    24495485    24508170    30249741    21282665    25474469    17994087    26227816    20353571    28004739    18362917    19820115    25315136    24845553    20798317    24945155    17510324    23537049    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22516182    28648823    17550304    21719571    25244985    15562597    22936249    21347285    26483478   

EMBL

DQ311162    ABD36107.1    BABH01020260    BABH01020261    DQ311164    ABD36109.2    + More
DQ311163    ABD36108.1    KQ461155    KPJ08323.1    HM449876    ADO33011.1    AK401457    BAM18079.1    KT182637    ANG83453.1    ODYU01002629    SOQ40387.1    KJ622099    AID66689.1    GAIX01014106    JAA78454.1    RSAL01000108    RVE47253.1    CU367882    CU463862    CBH09259.1    CBH09263.1    AGBW02014684    OWR41187.1    KQ459232    KPJ02609.1    NWSH01001193    PCG72180.1    ACPB03004539    GDKW01001258    JAI55337.1    GBRD01015130    GDHC01017762    JAG50696.1    JAQ00867.1    GFTR01004629    JAW11797.1    GAKP01011137    GAKP01011136    JAC47815.1    NEVH01009765    PNF32950.1    UFQT01000198    SSX21592.1    GBGD01002380    JAC86509.1    GAMC01003926    JAC02630.1    GDHF01007045    JAI45269.1    KK107105    QOIP01000011    EZA59570.1    RLU16590.1    GL762838    EFZ20717.1    JXJN01020473    KQ414756    KOC61682.1    KC740700    AGM32524.1    KQ764887    OAD54232.1    GBBI01002471    JAC16241.1    GFXV01001754    MBW13559.1    ABLF02014792    CH933808    EDW10240.2    LJIG01022891    KRT78198.1    JTDY01003327    KOB69732.1    EZ422442    ADD18718.1    GFDG01001728    JAV17071.1    GGMR01000999    MBY13618.1    CCAG010020817    CP012524    ALC42200.1    GEZM01045863    JAV77649.1    GEDC01016881    GEDC01013380    GEDC01012888    GEDC01000767    JAS20417.1    JAS23918.1    JAS24410.1    JAS36531.1    GECZ01019601    JAS50168.1    GEBQ01023148    JAT16829.1    GECU01002208    JAT05499.1    KQ971357    EFA08293.1    KA645916    AFP60545.1    CH940648    EDW60744.1    GEMB01001304    JAS01852.1    KK852498    KDR22576.1    KQ434857    KZC08844.1    CH964154    EDW79728.1    CH916367    EDW00716.1    GBYB01005856    JAG75623.1    OUUW01000001    SPP74273.1    AJVK01003104    GL435522    EFN73306.1    GAPW01002994    JAC10604.1    CH477289    EAT44660.1    APGK01056523    KB741277    ENN71066.1    GALX01003541    JAB64925.1    CM000071    ENO01816.2    AE013599    BT003259    AAF58326.1    AAO25016.1    KQ980886    KYN11891.1    KI209223    ERL95999.1    KQ982805    KYQ50509.1    CVRI01000072    CRL07526.1    BT128542    AEE63499.1    NNAY01002086    OXU22123.1    KQ977862    KYM99274.1    CH954179    EDV56116.1    CM000158    EDW90569.2    CM000362    EDX06974.1    CH480816    EDW47774.1    CH902619    EDV37950.1    KQ976439    KYM86767.1    GL888406    EGI61493.1    CM002911    KMY93583.1    ADTU01018888    KQ981693    KYN37818.1    JXUM01055125    KQ561852    KXJ77333.1   

Proteomes

UP000005204    UP000053240    UP000283053    UP000007151    UP000053268    UP000218220    + More
UP000015103    UP000235965    UP000053097    UP000279307    UP000092460    UP000053825    UP000092443    UP000007819    UP000009192    UP000037510    UP000092445    UP000092444    UP000091820    UP000092553    UP000078200    UP000007266    UP000095301    UP000008792    UP000095300    UP000027135    UP000076502    UP000007798    UP000001070    UP000005203    UP000268350    UP000192221    UP000092462    UP000000311    UP000008820    UP000019118    UP000001819    UP000000803    UP000078492    UP000030742    UP000075809    UP000183832    UP000215335    UP000078542    UP000008711    UP000075885    UP000002282    UP000000304    UP000001292    UP000075880    UP000007801    UP000078540    UP000075900    UP000075901    UP000007755    UP000075920    UP000076408    UP000076420    UP000005205    UP000078541    UP000069940    UP000249989    UP000075884   

PRIDE

Q2F6B0    H9J814    Q2F6A8    Q2F6A9    A0A087ZNZ9    Q7JR58    + More

Pfam

PF00378   ECH_1        + More
PF00098   zf-CCHC
PF00076   RRM_1

Interpro

IPR029045   ClpP/crotonase-like_dom_sf        + More
IPR001753   Enoyl-CoA_hydra/iso       
IPR018376   Enoyl-CoA_hyd/isom_CS       
IPR014748   Enoyl-CoA_hydra_C       
IPR001878   Znf_CCHC       
IPR035979   RBD_domain_sf       
IPR000504   RRM_dom       
IPR012677   Nucleotide-bd_a/b_plait_sf       

SUPFAM

SSF52096   SSF52096        + More
SSF54928   SSF54928       

Gene 3D

1.10.12.10     3.30.70.330    

ProteinModelPortal

Q2F6B0   H9J814   Q2F6A8   Q2F6A9   A0A194QS26   E3UKK2   + More
I4DJI9   A0A173FD02   A0A2H1VHS6   A0A068FKE8   S4NN34   A0A3S2LI98   C9S271   A0A212EI85   A0A194QB04   A0A2A4JL94   T1HHP0   A0A0P4W0W1   A0A0K8SBL7   A0A224XH30   A0A034W116   A0A2J7QWJ0   A0A336LU75   A0A069DYG6   W8CCC7   A0A0K8W2I4   A0A026WU20   E9IFF6   A0A1B0BU54   A0A0L7QSR6   A0A1A9YQW0   R4UK97   A0A310SIJ1   A0A023F444   A0A2H8THN2   J9JM53   B4KPW3   A0A0T6AT52   A0A0L7L2P9   D3TLZ0   A0A1B0A212   A0A1L8EEE8   A0A2S2N943   A0A240SWV2   A0A1A9WWH4   A0A0M4EW24   A0A1A9VW65   A0A1Y1LVP8   A0A1B6DFI9   A0A1B6FIZ5   A0A1B6KZE3   A0A1B6K254   D6WVI1   T1PAX8   A0A1I8NEK3   B4LKU0   A0A161TEE0   A0A1I8NLM6   A0A067RFD5   A0A154PBQ9   B4N5T9   B4J590   A0A0C9RFS2   A0A087ZNZ9   A0A3B0J497   A0A1W4VGL7   A0A1B0GMB5   E1ZZT3   A0A023EPZ2   Q17E10   N6TS11   V5G4I9   N6V8P2   Q7JR58   A0A195DGC1   U4UPJ9   A0A151WRH8   A0A1J1J7S6   J3JZ61   A0A232EUV8   A0A151IEI5   B3NRG4   A0A182P7I3   B4P459   B4QEU7   B4HQX7   A0A182IXQ9   B3MHF0   A0A195BLZ8   A0A182RYX9   A0A182T3X7   F4WWF1   A0A182W1Y1   A0A182YLA3   A0A2C9K292   A0A0J9RC54   A0A158NKM0   A0A195FBN0   A0A182GCY2   A0A182N3W7  

PDB

2DUB     E-value=3.19143e-85,     Score=801

KEGG

101745599    K07511 enoyl-CoA hydratase [EC:4.2.1.17] | (RefSeq) probable enoyl-CoA hydratase, mitochondrial

PATHWAY

00062    Fatty acid elongation - Bombyx mori (domestic silkworm)
00071    Fatty acid degradation - Bombyx mori (domestic silkworm)
00280    Valine, leucine and isoleucine degradation - Bombyx mori (domestic silkworm)
00310    Lysine degradation - Bombyx mori (domestic silkworm)
00380    Tryptophan metabolism - Bombyx mori (domestic silkworm)
00410    beta-Alanine metabolism - Bombyx mori (domestic silkworm)
00640    Propanoate metabolism - Bombyx mori (domestic silkworm)
00650    Butanoate metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01200    Carbon metabolism - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0003824   GO:0005739   GO:0004300   GO:0006635   GO:0016853   GO:0003723   GO:0008270   GO:0005759   GO:0008152   GO:0005975   GO:0004553   GO:0005737   GO:0016301   GO:0016773   GO:0016155  

Length:

296

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.586259999999999

Exp number, first 60 AAs:

0.00068

Total prob of N-in:

0.10786

outside

1  -  296

 

 

Pi

185.448073

Theta

147.318748

Tajima's D

1.037638

CLR

0.017084

CSRT

0.673466326683666

Interpretation

Uncertain