SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10113
Pre Gene Modal
BGIBMGA005657
Annotation
PREDICTED:_uncharacterized_protein_LOC106119039_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 4.353
 

Sequence

CDS
ATGAATTTGAGTAGTCCTAGAAGAAGACTGTATCTCAGCAAAGACGGCAATGGAGTCTATATAGACAACTGTAATCTACCACAGCACCAAAGAGATGGTATTAGATTTATTTACAGACAATTTGAACTGAAAAACCCTGGTATAATATTAAATGATCCATCAGGTTATGGAAAAAAATTACAAGTTGTCTTATTCATAAAAGCAATTAGACATGCTCTTGAGGACTCGGTGTTGATCATCTGCAATGACAATGATGCAGTCATTTGGCTGGAACACTTCAGGGAGTGGACTGATTTCTATGATGAAGTGTGTATTGAGAATTTTAATCCTTACAAGAAGAAGTTTGTTTTTATAAACACCATGCAGAATCTTCAAGCATTCACCAGCCGACAGAGAAGTGTCATTATAATTGACAACGATATCGTCACAAAGGAAATGTTGAAGCTTTCATACAGATGCAACTTCAAGATATGGATGACATCCGTAGAAATGAAAAAAAATCTAGATCTATTCTCTGGGGTATACAGTTGGTTATTTCCAAAAGAAAAAGTAGAAATCGATAAATTCAAAATCAATGATGGTGATGCATCTGATTACGTAACCAAAACGATACTCTTCGATGCTTTCACCGAAGAGTTTTTGAAGAGGAGTGAGGATTTCTTAACGCCTTTTTCTGTTAATAAGAAACCTAGTACTTCGGTCAAACAATCAAGAAAGAGAAAGGACATAACTGGTACTAAAATAAAACGTACTAAACGTGCAATTATAGATGACGATGATGATGATAATGATATTAAAGTAAATAGTGATATTAAACATAATAATGCTGATGTAACAAATAAGAATGATAATAGTAAGAGTGAAAATGGTGTTAATGATACTGGAGATCAATTAAAAATGGATGTTGAAACGTTCAAAGAACCATGTTCCGAAGTGAAAGTACCCGAATTGTGTGATAAGATTGTTAATAATATGGACTCGGTAGATCTGTTTGAACTCGATGAAATGATAGGTTTTAATAACATTAGTTATAATGATGTAAAACAAGCGATTATAAATGTAGAAAGTGATTTAGTGAATGATGATCAAATAAAAAATATTGAATCTGAAACTAAAAACAGTTGTAATCTACTTTTAAATAAGGTAGATAATACAAATAAAGTATCAGAAAATACAGTAGATACTACAAATAAAGTATCATTAAATAAAGACGATAATGAAGTAATTGATGATCATAAAATGAGTGTAGAAGAATCTGAAGTTGACGATCCAAATGACAGTACACAGAGTCACAAAAGTATAGACACGATAATGAAGGAATACGAACATAAAATATACGACAAATTCAAAGGCTCGCTGCTGGATAGTTTATTTTAA
Protein
MNLSSPRRRLYLSKDGNGVYIDNCNLPQHQRDGIRFIYRQFELKNPGIILNDPSGYGKKLQVVLFIKAIRHALEDSVLIICNDNDAVIWLEHFREWTDFYDEVCIENFNPYKKKFVFINTMQNLQAFTSRQRSVIIIDNDIVTKEMLKLSYRCNFKIWMTSVEMKKNLDLFSGVYSWLFPKEKVEIDKFKINDGDASDYVTKTILFDAFTEEFLKRSEDFLTPFSVNKKPSTSVKQSRKRKDITGTKIKRTKRAIIDDDDDDNDIKVNSDIKHNNADVTNKNDNSKSENGVNDTGDQLKMDVETFKEPCSEVKVPELCDKIVNNMDSVDLFELDEMIGFNNISYNDVKQAIINVESDLVNDDQIKNIESETKNSCNLLLNKVDNTNKVSENTVDTTNKVSLNKDDNEVIDDHKMSVEESEVDDPNDSTQSHKSIDTIMKEYEHKIYDKFKGSLLDSLF

Summary

Uniprot
Interpro
IPR027417   P-loop_NTPase        + More
IPR038718   SNF2-like_sf       
SUPFAM
SSF52540   SSF52540       
Gene 3D
ProteinModelPortal
PDB
5VVR     E-value=0.00474606,     Score=95

Ontologies

GO

Topology

Length:
458
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00023
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00439
outside
1  -  458
 
 

Population Genetic Test Statistics

Pi
197.109864
Theta
157.550512
Tajima's D
0.875071
CLR
19.790791
CSRT
0.625068746562672
Interpretation
Uncertain
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