Gene

KWMTBOMO10110

Pre Gene Modal

BGIBMGA005553

Annotation

PREDICTED:_sorting_nexin-8-like_[Papilio_xuthus]

Location

Bomo_Chr17(+):2335985-2347879      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.982 Nuclear   Reliability : 1.381

CDS

ATGACAAATACAAATGAAGTAACATTTCAAGAGCTTGAAGCAACTGATGTTGTAAGCATAGACCTTGTACCCGAACGGAAGGGAATTATACTAAAACACTGCGAGTATTATGTCAGCTCAAGGCGTCATGGCACAACTGTGACCAGAAGATACAATGATTTTGTACAGCTTTACGATGTGCTATTTGCTAAATATCCTTATCGGGCTGTATGTCAGCTACCTCCGAAACGTGTGGTGGTTGGGGGCGGAAGTGGACAGTTCTTAGAATCCCGTCGCGCTGCTCTCCAACGTTGGCTATCGTTGGCCGCCTGTCATCCAATATTGGCGCATGATGCTGACTTGCGCATCTTCCTATCTGAGTCGGTCCTGCGGCTGGAGAAACCTAAGCACGACGAGTTCGTGCTTGCCGGTACTCAGTGCGATGAACAGGAAGAAACATCTCTAGACGAAATGAAGGCGAGGTTTGCGAAGGAGCAGGAACAACTGCGGATCTTGTACTTGGGGATGGATAGACTAGCGCAGATATTCGATAGAGTTAAAATCAGATGCGAAGCAGAAAAATCAGATTTCCGTGAGCTGGGGGCCGCGCTGCAGGCGCTGTCGACGCGGGACGCCGCCGACACCCCGCTCTGGACCCGGCTCAAGCAAGCTTACGGCGACGCGGCGCTGGTATGTACCGGGGAGATGTTCGACGACGAGTCTGTGGACAGCGAGGCGGAGGGGCGGGTGTCGCTGGCGCGCGACGCGCTGGCGGCCGGCCGCGAGCTGTGCGCGCGGCTGGGGCGCGGCCTGCACGCAGAGCGCGCCGCCGCCGCCGCGCTCGCGCCGCCCCACGCGCAGCTGCGGAGACGACACCTCTACGCGCTCACCGCCGTCCTTCAGTTTTTCCAAATCGATGATGAATTACAAAATTTTCATCAAACTAAACCATAA

Protein

MTNTNEVTFQELEATDVVSIDLVPERKGIILKHCEYYVSSRRHGTTVTRRYNDFVQLYDVLFAKYPYRAVCQLPPKRVVVGGGSGQFLESRRAALQRWLSLAACHPILAHDADLRIFLSESVLRLEKPKHDEFVLAGTQCDEQEETSLDEMKARFAKEQEQLRILYLGMDRLAQIFDRVKIRCEAEKSDFRELGAALQALSTRDAADTPLWTRLKQAYGDAALVCTGEMFDDESVDSEAEGRVSLARDALAAGRELCARLGRGLHAERAAAAALAPPHAQLRRRHLYALTAVLQFFQIDDELQNFHQTKP

Uniprot

C9S279   A0A194QC95   A0A212FII3   L7X3V4   A0A0L7L2U4   A0A0V0G7R4   + More
T1IAK3   A0A067QJI4   A0A1B6K236   A0A2J7QEC3   A0A1B6MBK3   A0A0P4VG87   A0A0A9XXK9   A0A1B6EQ61   A0A026WXX4   E9JBZ6   A0A2R7WT69   A0A158NKL6   A0A195F594   A0A195D027   E2AYD4   A0A195EJ76   A0A0J7KP47   A0A195BVX5   A0A310SCI9   A0A2A3E843   V9IEV8   A0A088AEF3   F4WD10   A0A3L8E1W0   E2BQQ8   A0A0L7QUM0   A0A0N0BCG6   A0A2B4S240   A0A091ER28   A0A0B6XYZ4   A0A1W7RFE0   A0A3M0KWP6   A0A091GHJ3   A0A0F7Z5K8   A0A099ZXJ9   A0A091GZW2   H0ZCW4   T1E5N7   A0A099ZG95   K7FRX3   U3KHL0   A0A3L8SFM6   H9GEQ0   A0A218V7J9   A0A091V9R0   A0A091JPU5   A0A091T427   A0A091QGY1   A0A091JVH7   A0A093SP84   A0A3Q2U9X6   G1MUT0   A0A091IAN8   A0A0Q3XBA6   A0A093J7S8   A0A091V764   A0A091WAY1   A0A091TX84   A0A091KXT8   A0A091MHX5   R0JUU4   A0A093DQ12   U3J8J4   A0A2R5LKU5   A0A093J9L5   A0A093NW47   A0A087RFX3   A0A2I0M0P8   A0A3Q2U5T3   A0A091NKS3   A0A1W4X8J3   V4C0G1   A0A093R2D6   F1NZ35   A0A1V4KSA8   A0A293L3X6   E2R8Q0   A0A293MEI5  

Pubmed

26354079    22118469    23674305    26227816    24845553    27129103    + More
25401762    26823975    24508170    21282665    21347285    20798317    21719571    30249741    26358130    20360741    23758969    25727380    17381049    30282656    21881562    15592404    20838655    23749191    23371554    23254933    16341006   

EMBL

CU367882    CBH09255.1    KQ459232    KPJ02605.1    AGBW02008375    OWR53549.1    + More
KC469893    AGC92680.2    JTDY01003325    KOB69740.1    GECL01002107    JAP04017.1    ACPB03000155    KK853286    KDR08951.1    GECU01002177    JAT05530.1    NEVH01015316    PNF26938.1    GEBQ01006680    JAT33297.1    GDKW01003409    JAI53186.1    GBHO01018062    GBRD01013395    GDHC01009049    JAG25542.1    JAG52431.1    JAQ09580.1    GECZ01029816    JAS39953.1    KK107087    EZA59994.1    GL771642    EFZ09670.1    KK855480    PTY22756.1    ADTU01002109    ADTU01002110    ADTU01002111    KQ981805    KYN35566.1    KQ977110    KYN05729.1    GL443887    EFN61551.1    KQ978801    KYN28315.1    LBMM01004735    KMQ92123.1    KQ976403    KYM92116.1    KQ770367    OAD52656.1    KZ288355    PBC27221.1    JR040589    AEY59197.1    GL888077    EGI67917.1    QOIP01000001    RLU26443.1    GL449798    EFN81977.1    KQ414734    KOC62337.1    KQ435908    KOX68968.1    LSMT01000234    PFX22628.1    KK718885    KFO59037.1    HACG01002213    CEK49078.1    GDAY02001586    JAV49841.1    QRBI01000098    RMC17658.1    KL448274    KFO81810.1    GBEX01002225    JAI12335.1    KL869946    KGL86571.1    KL516011    KFO88062.1    ABQF01038220    GAAZ01001611    GBKC01002367    JAA96332.1    JAG43703.1    KL892473    KGL79845.1    AGCU01017993    AGCU01017994    AGCU01017995    AGCU01017996    AGTO01010793    QUSF01000022    RLW01412.1    AAWZ02025450    MUZQ01000034    OWK61916.1    KL410807    KFQ99848.1    KK502235    KFP21770.1    KK496095    KFQ65656.1    KK698712    KFQ25962.1    KK531214    KFP28091.1    KL672051    KFW84434.1    AADN05000376    KL218366    KFP04538.1    LMAW01000001    KQL61485.1    KK607530    KFW10008.1    KK417028    KFQ85563.1    KK735067    KFR12265.1    KK468089    KFQ83044.1    KK758897    KFP44248.1    KK828391    KFP74543.1    KB743145    EOB00952.1    KL228800    KFV04251.1    ADON01076621    GGLE01006024    MBY10150.1    KK578004    KFW11720.1    KL224810    KFW64357.1    KL226347    KFM12377.1    AKCR02000052    PKK23254.1    KL387376    KFP90373.1    KB201721    ESO94914.1    KL426122    KFW90342.1    LSYS01001700    OPJ87313.1    GFWV01000397    MAA25127.1    AAEX03004329    GFWV01013850    MAA38579.1   

Proteomes

UP000053268    UP000007151    UP000037510    UP000015103    UP000027135    UP000235965    + More
UP000053097    UP000005205    UP000078541    UP000078542    UP000000311    UP000078492    UP000036403    UP000078540    UP000242457    UP000005203    UP000007755    UP000279307    UP000008237    UP000053825    UP000053105    UP000225706    UP000052976    UP000269221    UP000053760    UP000053858    UP000007754    UP000053641    UP000007267    UP000016665    UP000276834    UP000001646    UP000197619    UP000053283    UP000053119    UP000053258    UP000000539    UP000001645    UP000054308    UP000051836    UP000053605    UP000016666    UP000054081    UP000053286    UP000053872    UP000192223    UP000030746    UP000190648    UP000002254   

PRIDE

F1NZ35   

Pfam

PF00787   PX

Interpro

IPR001683   Phox        + More
IPR028662   SNX8/Mvp1       
IPR036871   PX_dom_sf       
IPR035704   SNX8/Mvp1_PX       
IPR027267   AH/BAR_dom_sf       
IPR011992   EF-hand-dom_pair       
IPR000261   EH_dom       

SUPFAM

SSF64268   SSF64268        + More
SSF47473   SSF47473       

Gene 3D

3.30.1520.10     1.20.1270.60    

CDD

cd06866  PX_SNX8_Mvp1p_like

ProteinModelPortal

C9S279   A0A194QC95   A0A212FII3   L7X3V4   A0A0L7L2U4   A0A0V0G7R4   + More
T1IAK3   A0A067QJI4   A0A1B6K236   A0A2J7QEC3   A0A1B6MBK3   A0A0P4VG87   A0A0A9XXK9   A0A1B6EQ61   A0A026WXX4   E9JBZ6   A0A2R7WT69   A0A158NKL6   A0A195F594   A0A195D027   E2AYD4   A0A195EJ76   A0A0J7KP47   A0A195BVX5   A0A310SCI9   A0A2A3E843   V9IEV8   A0A088AEF3   F4WD10   A0A3L8E1W0   E2BQQ8   A0A0L7QUM0   A0A0N0BCG6   A0A2B4S240   A0A091ER28   A0A0B6XYZ4   A0A1W7RFE0   A0A3M0KWP6   A0A091GHJ3   A0A0F7Z5K8   A0A099ZXJ9   A0A091GZW2   H0ZCW4   T1E5N7   A0A099ZG95   K7FRX3   U3KHL0   A0A3L8SFM6   H9GEQ0   A0A218V7J9   A0A091V9R0   A0A091JPU5   A0A091T427   A0A091QGY1   A0A091JVH7   A0A093SP84   A0A3Q2U9X6   G1MUT0   A0A091IAN8   A0A0Q3XBA6   A0A093J7S8   A0A091V764   A0A091WAY1   A0A091TX84   A0A091KXT8   A0A091MHX5   R0JUU4   A0A093DQ12   U3J8J4   A0A2R5LKU5   A0A093J9L5   A0A093NW47   A0A087RFX3   A0A2I0M0P8   A0A3Q2U5T3   A0A091NKS3   A0A1W4X8J3   V4C0G1   A0A093R2D6   F1NZ35   A0A1V4KSA8   A0A293L3X6   E2R8Q0   A0A293MEI5  

PDB

6H7W     E-value=2.80002e-07,     Score=129

KEGG

NA   

GO

GO:0035091   GO:0005829   GO:0042147   GO:0016021   GO:0006886   GO:0043231   GO:0042802   GO:0034498   GO:0030904   GO:0031901   GO:0032040   GO:0008270   GO:0008026   GO:0005737   GO:0008152   GO:0016301   GO:0016773   GO:0016155   GO:0003824  

PANTHER

PTHR46571  

Length:

310

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00601999999999999

Exp number, first 60 AAs:

0.00052

Total prob of N-in:

0.06797

outside

1  -  310

 

 

Pi

177.527904

Theta

153.783717

Tajima's D

0.066214

CLR

111.278713

CSRT

0.390930453477326

Interpretation

Uncertain