Pre Gene Modal
BGIBMGA005552
Annotation
PREDICTED:_U3_small_nucleolar_RNA-associated_protein_14_homolog_A_[Amyelois_transitella]
Location in the cell
Nuclear Reliability : 4.041
Sequence
CDS
ATGGAAGGTATTGATGATATAGAGCACATAGCTTCGGACCATGATCAACTAATTAGTGTGATTTCCAAATTAGATAAAACTCAGCATATAATAGAGCCCACACGCAACGAGCCCACAAACATCAATTCAGAATTTAATTTGATAAAAAAATCGAATAAGTCAATTTTGAAAAATGTTTCTAACATTTTGAGTGATACTGCTTCACATGTAGAGATTACGAAAAAATTGCTGAAAAGCCAGGAAGAGTCCAAGGTCTTAAGTAAACCATTAGAAAAACCACAGGTTGAGCGTATAAAGCGAGCGACAGGATATTTAGAAACAAAAAAGAAAGTTGGTCGGTGGGACCCCATTGTTGCTCGCAGTCGAACAGTGGACCAGGTTTTCTTTCCTTTGAAAAAAGCAGAAAATAGATTGCAGCCAACGCAAGCCTTCATTTCAAAATTAAAAACTAAATCTGAACTAGAACGCGAATTGGAGGCAGTAGATCCACCAGATATTGTTCAGGAAGACGATGAGGAAGAACAGGTGTACCCAATGTCGTATGAAGAAATGGTTGAACACAGGCAACATTTGGCAAAAATACGAGCTCAAGAATCATATAGAGCTGCAAAAGCTAAACGCCAAAGTAAAATCAAGAGCAAGAAATATCATAGAATTTTGAAGAAAGACAGGCTAAAACAACAGTTAAAAGAGTTTGAAGAATTACAAAAAAGTAATCCAGAGGAGGCCTTAAAGAAATTGGAGGCTCTGGAAAAATCTAGAGCATTAGAAAGACATACACTGCGGCATAAGAACACTGGAAAGTGGGCAAAAAATAAAATGATCAGAGCAAAGTATGATAAAGAGGCTCGGCAAGAAATAGCAGAACAGTTAGCAGTTAGTCGAAGTTTGACACAAAAGACACAAGACCCTGATAGTTCAGATGATGATGCAGAAGATAATGTAGTTATTCCTGATATTGCTTTAGCACAAGACCCGATGAATCCTTGGATGTTGAAACAAAACAATAAGTCTAATGTTGATGCAGAATTTGATTTCGGCTACAAAAAATATTTGAAAGGAAAAATGTTTAAACATAAAGAAGACAGTGGTAGTGAAGATGAAGCAGAAAAAAATAATGATACTACAAAAGCATGTTCTGATGCTGGATTAAATACTTTAAAAAATAAAATTGAGAAAATATTTAACAACAAAAATGAAAGTGCACAAATTGATAAAAATATTGAAGAAGACAACAGTACTGAACAAAATCAATCAGATCTGAATCAACCAATTCAGAACAATTCCAATATTACAAAAAACAAGATTGTTGAAACAGAACAAAAACAAAAAGAAAACAAAATGAAGAAAAATAAAGAAACTCTTAACAATAATAAAAAATCCCTTAAAACTAAACTGGTAGCAACATCTTATTGGACTGTTGAACCTGTAGAGAATAAAGATAAAAAGTACACTGAAGGTGTTGGGGGTGCATTTGATAATTTGGAAAGAAACATATCGAAACAAGTTAATATGAAATTAGATATTTTCAGGAGGAAATTAAGAAAGCTTGAACAGCTAACAGCTTCAAAGAGTAAAAAGAAATCCAAAAGAATAGGAAACAGTGAATCATATATACCTGAGAATAATTTGGAGTACTTAAAATTAGCAACTCAAAATAAGAAAGCTATAATTGATGAACAGTTACTAGAAACTACTTCAAAAACTATTCCTACTGAAGAAACAATATCTGATGATATTATGTCGAGGGCTATGCTACATAACAAGATTCCAGCTGAGGAACCTACAAACTCAAACATTGATCCCAGTAAATTTATTGAGGTCAAACCGAAATTCTTAAACTCTGAAATATCTCGACAAGAAACTGAATTAGATGTTTTAGATGATGAACAAGTTGTACCAAAAGTCAATATAGAAGAAGTATTTGAGGAAGATGATGTTGTAGCTAGCTTTAGGCAAGAAAAAGAAGATGAGGCTAATAAAGATAAGCCCGAAGATATTAACTTGACTCTGCCAGGATGGGGAGCGTGGGGAGGAAAAGGAGTGAAAGCACCGAAACGAAAAAGAAATAGATTCATTACTAAATTTGCCCCAAAAACTCCCAGGAGGGATGAGAACAAAGGTGATGTAATCATTAAAGAATACAAGGATCTAAAATTGGATGCACATAAAGTAAAAGAACTCCCATATCCTTTCAACAGTGTTAAAGAATTCGAGGCCTCACTAAGAGCTCCATTAGGCAACACATTTATACCTGAGACTGCACACCGAAAACTTACACGTCCAAATGTTGTCACTATGGCAGGCGCTATTATAGAACCTATGGATGAAGATGAATTGTTACAAAAGAAGAATCGTACCTTTAAATCATCCAACGTGATACAATTCATAAATAAAGATGGTTGA
Protein
MEGIDDIEHIASDHDQLISVISKLDKTQHIIEPTRNEPTNINSEFNLIKKSNKSILKNVSNILSDTASHVEITKKLLKSQEESKVLSKPLEKPQVERIKRATGYLETKKKVGRWDPIVARSRTVDQVFFPLKKAENRLQPTQAFISKLKTKSELERELEAVDPPDIVQEDDEEEQVYPMSYEEMVEHRQHLAKIRAQESYRAAKAKRQSKIKSKKYHRILKKDRLKQQLKEFEELQKSNPEEALKKLEALEKSRALERHTLRHKNTGKWAKNKMIRAKYDKEARQEIAEQLAVSRSLTQKTQDPDSSDDDAEDNVVIPDIALAQDPMNPWMLKQNNKSNVDAEFDFGYKKYLKGKMFKHKEDSGSEDEAEKNNDTTKACSDAGLNTLKNKIEKIFNNKNESAQIDKNIEEDNSTEQNQSDLNQPIQNNSNITKNKIVETEQKQKENKMKKNKETLNNNKKSLKTKLVATSYWTVEPVENKDKKYTEGVGGAFDNLERNISKQVNMKLDIFRRKLRKLEQLTASKSKKKSKRIGNSESYIPENNLEYLKLATQNKKAIIDEQLLETTSKTIPTEETISDDIMSRAMLHNKIPAEEPTNSNIDPSKFIEVKPKFLNSEISRQETELDVLDDEQVVPKVNIEEVFEEDDVVASFRQEKEDEANKDKPEDINLTLPGWGAWGGKGVKAPKRKRNRFITKFAPKTPRRDENKGDVIIKEYKDLKLDAHKVKELPYPFNSVKEFEASLRAPLGNTFIPETAHRKLTRPNVVTMAGAIIEPMDEDELLQKKNRTFKSSNVIQFINKDG
Summary
Uniprot
EMBL
Proteomes
PRIDE
Interpro
IPR006709
SSU_processome_Utp14
ProteinModelPortal
PDB
5OQL
E-value=1.82093e-08,
Score=144
Ontologies
PANTHER
Topology
Length:
801
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00003
outside
1 - 801
Population Genetic Test Statistics
Pi
134.947952
Theta
167.743627
Tajima's D
-1.067289
CLR
0.21509
CSRT
0.129693515324234
Interpretation
Uncertain
