SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10105
Pre Gene Modal
BGIBMGA005658
Annotation
gloverin_2_precursor_[Bombyx_mori]
Full name
Gloverin      
Location in the cell
Extracellular   Reliability : 1.322 Nuclear   Reliability : 1.314
 

Sequence

CDS
ATGAATTCAAATCTGTTTTATATCTTCGCTACAACTCTGGTGTGTGTTAACGCAGAAGTTTACGGACCTTCTGATTACGCAGAAGATTACTCGATCAGCGGGCAATCCTCAAGGCGACACCCCCGTGACGTCACTTGGGACAAACAAATGGGGGGAGGCAAGGTCTTTGGCACTTTGGGACAAAACGATGATGGCCTCTTTGGAAAAGCTGGTTACAACAAAGAGATCTTTAATGACGACCGCGGCAAACTAACCGGTCAGGCTTACGGTACCAGGGTTTTAGGACCTGGAGGCGACAGCACCAACTACGGCGGACGCCTAGACTGGGCGAACAAGAATGCACAAGCCACTATTGACCTAAATAGACAAATCGGTGGCAGATCTGGGATGACAGCATCAGGCTCCGGTGTGTGGGATCTGGATAAGAACACCCACTTTTCTGCCGGTGGTATGGTCTCGAAGGAGTTCGGTCACAAAAGACCAGACGTCGGTCTTCAAGCAGAGATCCGCCATGATTGGTGA
Protein
MNSNLFYIFATTLVCVNAEVYGPSDYAEDYSISGQSSRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNKEIFNDDRGKLTGQAYGTRVLGPGGDSTNYGGRLDWANKNAQATIDLNRQIGGRSGMTASGSGVWDLDKNTHFSAGGMVSKEFGHKRPDVGLQAEIRHDW

Summary

Keywords
Antibiotic   Antimicrobial   Direct protein sequencing   Immunity   Innate immunity   Secreted  
Feature
chain  Gloverin
EMBL
BABH01020272    AB186417    AB239448    BAE53372.1    BAF51564.1    AB190864    + More
BAD51474.1    KT159923    ANS56421.1    AB190865    BAD51475.1    BABH01025576    AB289656    BAF63527.1    BABH01029285    AB186418    AB289657    BAE53373.1    BAF63528.1    KT159925    ANS56423.1    AB190866    BAD51476.1    KT159924    ANS56422.1    KT159922    ANS56420.1    AB190863    BAD51473.1    BABH01029283    AB289654    BAF63526.1    EU557310    ACB45565.1    AM293324    CAL25129.1    KF724966    AHC94952.1    RSAL01000157    RVE45572.1    DQ666495    ABG72699.1    AY232303    AAO74639.1    KP056508    AKJ54490.1    KZ150002    PZC75292.1    KT346373    ALT16898.1    HM595744    ADL27731.1    NWSH01000488    PCG76058.1    FJ546344    ACR78446.1    AF233590    AAG44367.1    ODYU01001626    SOQ38113.1    ODYU01001627    SOQ38117.1    PZC75293.1    PCG76057.1    AM293319    CAL25124.1    NWSH01002731    PCG67614.1    AK402151    BAM18773.1    DQ666496    ABG72700.1    PZC75294.1    KQ459547    KPJ00058.1    SOQ38116.1    ODYU01003493    SOQ42363.1    KU950738    AMY60406.1    EU016389    ABV68856.1    FJ619624    ACM69342.1    AGBW02013581    OWR43200.1    AGBW02014422    OWR41701.1    KQ460427    KPJ14762.1    AGBW02012939    OWR44196.1    KQ459602    KPI93214.1    MG770225    AYM26645.1   
Pfam
PF10793   Gloverin        + More
PF03769   Attacin_C
PF03768   Attacin_N
Interpro
IPR019729   Gloverin-like_protein        + More
IPR040428   Attacin/Sarcotoxin-2       
IPR005520   Attacin_N       
IPR005521   Attacin_C       

Ontologies

Topology

Subcellular location
Secreted  
SignalP
Position:   1 - 18,         Likelihood:  0.972791
 
 
Length:
173
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.59515
Exp number, first 60 AAs:
0.59515
Total prob of N-in:
0.07137
outside
1  -  173
 
 

Population Genetic Test Statistics

Pi
35.809797
Theta
168.972384
Tajima's D
-0.842563
CLR
2.407756
CSRT
0.164491775411229
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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