Silkworm Genome Informatics Database

Gene

KWMTBOMO10101

Pre Gene Modal

BGIBMGA005660

Annotation

RING_finger_protein_unkempt_[Papilio_xuthus]

Location

Bomo_Chr17(-):2282184-2287104 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.263 Nuclear Reliability : 1.959

CDS

ATGCCGTCGGAATCCAAGCCTTTGTTAACAGCCCAAACCGAAAAACCGAATCATTACAAATATCTAAAAGAATTCCGAGTGGAGCAGTGTCCATCTTTTCTCCAACATAAATGTACACAACACAGGCCGTTTACGTGTTTTCATTGGCATTTTAATAATCAAAGGAGACGCAGACCTGTTAGAAAAAGAGACGGGACCTTCAACTATAGCGCGGACAATTACTGTACGAAGTACAACGAGACGTCGGGCGTTTGCGAAGACGGAGACGAGTGTCCGTTCCTGCATCGTACAGCAGGCGACACGGAGCGACGATATCACTTGCGCTACTACAAAACTTGCATGTGCGTACACGACACGGACACGCGCGGCCTCTGCACCAAGAACGGGGCGCATTGCGCGTTCGCACACGGAGCGCCCGACCTGCGCCCCCCCGTGCTGGACGTGCGCGAGCTGCACGCACTCGACGCGGACGACGACGCCGCGCCCAACGCCCTCGACCGAGAGCGGAACCTCATCAACGAAGACCCCAAGTGGCAAGATACAAATTATGTCCTGTCATCATATAAAACGGAACCATGTAAAAGACCTCCTAGGCTTTGTAGACAAGGGTATGCATGCCCTCAGTATCATAATAGTAAAGATAAACGTAGGTCTCCTAGAAAGTATAAATATCGCAGCACACCATGCCCGAACGTGAAGCATGGTGAGGAGTGGGGCGAGCCCAGCAATTGTGAAGCCGGTGACACTTGTGGATACTGTCATACGCGGACGGAGCAGCAGTTCCATCCAGAAATCTATAAATCCACAAAATGCAACGACGTTCAGCAGGCGGGATACTGTCCACGAGGCTTGTTCTGCGCCTTTGCGCACGTTGAGCCCGAAGAACCTGGCGGCCGCGAGCCCGGCCCCGGCGACTGCGGAACCAGTCTCGCGGACTTGCTGTCCTCCGCGTTGCCCGACAAGAAAGATCGCTCTACAACCCCTTCCGGTCCTCTCACAAATGGCGCCGGTGACGGATCTGAATGCGCGTCCACGTCCAGCGGGGGATCTGGTCCGCAGGCTGCGCGTGCTCGGCCTCTGCCTTTCGATACCGCCGTGCTGCAGGAGGTGGTCGGCTGTGCACTTGACGATCTGCACCTCGATGACCCCATCAATCTTGTCGCGGCTCTGGACCGCGATCTCTCGGACGGCGAGGGCGCGCTCGCGGGCTCCGCTCCCGTCAACATTCCGTCGGCGCGACCCGCCCTGCGCGGGTTCAGTCCCCCGGGCGGCTCACCGCTGCCGGCTTTCCTGCGATACGGACCCGACGCGTTCGGTCTCAAGGCTGGCAGCTTCGGCGCGTTCGAGGGCGGCGGCTGCGAGGTGTCGCGGCTGCGCGAGGAGGTGGCGGCGGCGCGGGCGGCGGTGGCGCGGTGGGACGAGCGCGTGGCGCAGGCGCGGGCGGCGTGCGAGGCGTGGCAGCGCGAGGCGGAGGACGCGGCGCGCAAGGCGGCGGTGGCGGAGCGGCAGCGCGACGAGGCGCTGGCACACGCGCTGGCGCTGCGGCGCGAGCTGGACGCGCTGGCGCCGCGCCGGGACCCGCGGGCGCTGTCGCTGCCGGCGCTCAAGGCGCTGCAGTCGCGCGCGCGGGCGGACCTCGAGGAGATCGAGAAGGCGTTGTACCTGGAGACGGCCACCAAGTGCATGGGCTGCGAGGAGCAGCCCCGCAGCGTCACGCTGGCGCCGTGCAACCACTACGTGCTGTGCGACAAGTGCGCGGGCACCACGGACCACTGCCCCTACTGCCAGACCCCGGTGCAGAGACACCAATAG

Protein

MPSESKPLLTAQTEKPNHYKYLKEFRVEQCPSFLQHKCTQHRPFTCFHWHFNNQRRRRPVRKRDGTFNYSADNYCTKYNETSGVCEDGDECPFLHRTAGDTERRYHLRYYKTCMCVHDTDTRGLCTKNGAHCAFAHGAPDLRPPVLDVRELHALDADDDAAPNALDRERNLINEDPKWQDTNYVLSSYKTEPCKRPPRLCRQGYACPQYHNSKDKRRSPRKYKYRSTPCPNVKHGEEWGEPSNCEAGDTCGYCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRGLFCAFAHVEPEEPGGREPGPGDCGTSLADLLSSALPDKKDRSTTPSGPLTNGAGDGSECASTSSGGSGPQAARARPLPFDTAVLQEVVGCALDDLHLDDPINLVAALDRDLSDGEGALAGSAPVNIPSARPALRGFSPPGGSPLPAFLRYGPDAFGLKAGSFGAFEGGGCEVSRLREEVAAARAAVARWDERVAQARAACEAWQREAEDAARKAAVAERQRDEALAHALALRRELDALAPRRDPRALSLPALKALQSRARADLEEIEKALYLETATKCMGCEEQPRSVTLAPCNHYVLCDKCAGTTDHCPYCQTPVQRHQ

Uniprot

A0A194QAZ3 A0A3S2NVV0 A0A194QS35 A0A212FII6 C9S274 L7X0P5 + More
A0A2A4JL62 A0A2A4JL90 A0A0C9PNW8 E0VI15 A0A2P8XQB3 N6TGN0 A0A0L0CJ72 A0A1I8PYZ8 A0A1I8MFZ1 A0A1I8MFY3 A0A1A9W2M2 A0A0Q9X7R7 A0A1W4UQZ5 A0A0R3NK30 A0A0R1E9G2 A0A0Q9WUB1 A0A0Q9WZC4

Pubmed

26354079 22118469 23674305 20566863 29403074 23537049 + More
26108605 25315136 17994087 15632085 17550304

EMBL

KQ459232 KPJ02599.1 RSAL01000145 RVE45925.1 KQ461155 KPJ08333.1 + More
AGBW02008375 OWR53555.1 CU367882 CBH09250.1 KC469893 AGC92674.1 NWSH01001193 PCG72183.1 PCG72182.1 GBYB01002818 JAG72585.1 DS235179 EEB13021.1 PYGN01001553 PSN34114.1 APGK01039007 KB740966 KB632186 ENN76943.1 ERL89713.1 JRES01000409 KNC31529.1 CH964272 KRG00168.1 CM000070 KRT00031.1 CM000160 KRK04116.1 CH940650 KRF83760.1 CH933806 KRG01311.1

Proteomes

UP000053268 UP000283053 UP000053240 UP000007151 UP000218220 UP000009046 + More
UP000245037 UP000019118 UP000030742 UP000037069 UP000095300 UP000095301 UP000091820 UP000007798 UP000192221 UP000001819 UP000002282 UP000008792 UP000009192

Pfam

PF18384 zf_CCCH_5 + More
PF00642 zf-CCCH

Interpro

IPR040594   Unkempt_Znf        + More
IPR000571   Znf_CCCH
IPR013083   Znf_RING/FYVE/PHD
IPR001841   Znf_RING
IPR036855   Znf_CCCH_sf
IPR011598   bHLH_dom

SUPFAM

SSF90229 SSF90229

Gene 3D

3.30.40.10

CDD

cd00083 HLH

ProteinModelPortal

A0A194QAZ3 A0A3S2NVV0 A0A194QS35 A0A212FII6 C9S274 L7X0P5 + More
A0A2A4JL62 A0A2A4JL90 A0A0C9PNW8 E0VI15 A0A2P8XQB3 N6TGN0 A0A0L0CJ72 A0A1I8PYZ8 A0A1I8MFZ1 A0A1I8MFY3 A0A1A9W2M2 A0A0Q9X7R7 A0A1W4UQZ5 A0A0R3NK30 A0A0R1E9G2 A0A0Q9WUB1 A0A0Q9WZC4

PDB

5ELH E-value=3.91578e-54, Score=537

KEGG

101742916 K23047 E3 ubiquitin-protein ligase UNKL [EC:2.3.2.27] | (RefSeq) RING finger protein unkempt

GO

GO:0046872 GO:0046983 GO:0005515 GO:0008270 GO:0008026 GO:0005737 GO:0008152 GO:0016301 GO:0016773 GO:0016155 GO:0003824

Length:

603

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

8e-05

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00015

outside

1 - 603

Pi

135.168496

Theta

172.547563

Tajima's D

-0.664624

CLR

0.429555

CSRT

0.210839458027099

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics