SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10098
Pre Gene Modal
BGIBMGA005549
Annotation
PREDICTED:_uncharacterized_protein_LOC101743057_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.083 PlasmaMembrane   Reliability : 1.464
 

Sequence

CDS
ATGCGCGAGTACGTGTCGCGCGTGTGCGGCGCCGTGCGGGCCAGCGACGCGCTGCGGGCGCTGGGCCCCGGCCTGCCCGAGCTGCTGGTGGCGCAGCTGCGGGCGCATCTCGCGCTGCACAGAGCCGAAGAAGGCGTCCGCAAAAAGATCGAGGCGGGTCTTGCGGCGGCCGAGGCGAGGGTCCGCGCCTCCCACCCGATCCTGTCCCGGGCCGACTCGTGGAGGAACGAGAAGCTGGCGGCGGCGGCGCGGCGGCTCCGGGACGAGTGCCGCTGGACCGCGCTCGAGGACGCCGCCGCCGCCATGCAGGCGCACAAGCTGCACCAGCACCGCTACTTCCTGCTGCGGGACCTGGCCTTCCAGCGGGACCGGGAGCCCTTGTTGATGAAGGAGCTGCGCGCGGCGCGGACGGCGCGGCGCTCGTGGCAGTGGGCGCGGCGCGTGTGGCGGCCGGCGCGCTGGGCCGTGGTGCGACACTGCCGCGGCCGCGCCGAGCGCGTGCGCACCGCCGTGGCCGCCCGCGCGCCCGCCGCCCCGCCCCGCGCCCGCCCGCCCGCCGCGCCGCCAGTGTTCCTGCTGCGGAGGGACGCCGTCTCCACCACCTCCACGCGCTGGCCGGCCTGGAGACTGCTCAACCTCGCCTATAGAATATGGTGCTGGAGCTGGAACCTGGTGTACGTGCTGGGCGTGGTGGTGCCGTGGTGCTCCCCGCTGTCGCTGCGAGCGCTGGTCTGCGTCAAGCCGTACACGCCGGAGCTAGAGGTCTCCCAGGTGAATGGAGTTTTATATCCGAAGAAGAGCAGCGAAACCCACACGATGTGCTCGCGACTGCTGGCGCTGTGGAGGCACGTGTCCAAACAGCGCACGAAGTTCGAAACCGAACCGGACACCGGCCTACTGGGCAAGGGCTTGAGTCGGTGGGCGCACCGCGTGTGGTGGTACGGCGTGGTGGGGGGCGGCGGGTCGGCGGCGCTGCTGGTGGTGTTCCCGGTGTGCGCGCTGGCGGTGTCGGCGGCGGCGGTGCTGCTGGCGCTGGCGGCCCCGCTGTGGACGCCGCCGCTGGCGCTGGCCGCGCACGTGGCGCACGCCGTGCTCTACGACGCCGACTCGCCCGACCCAGCACTCAACAGGTGGTGTCCGCTGCTGGAGGTGGTGCTGTGGCGAGTAGCGGTGCTGGGCGTGCTGCAGCCCGCCGCCGCGCTGCTCACGGCGCTGCTGCTCTGTCCGCTGGCTGCTGCTGTCCTGCTCGTCGGTGAGCACATCCACCCCCCCTCCCCACCTTCTTCTTATCGGCCCACAGACGTCAACTGCTGGACATAG
Protein
MREYVSRVCGAVRASDALRALGPGLPELLVAQLRAHLALHRAEEGVRKKIEAGLAAAEARVRASHPILSRADSWRNEKLAAAARRLRDECRWTALEDAAAAMQAHKLHQHRYFLLRDLAFQRDREPLLMKELRAARTARRSWQWARRVWRPARWAVVRHCRGRAERVRTAVAARAPAAPPRARPPAAPPVFLLRRDAVSTTSTRWPAWRLLNLAYRIWCWSWNLVYVLGVVVPWCSPLSLRALVCVKPYTPELEVSQVNGVLYPKKSSETHTMCSRLLALWRHVSKQRTKFETEPDTGLLGKGLSRWAHRVWWYGVVGGGGSAALLVVFPVCALAVSAAAVLLALAAPLWTPPLALAAHVAHAVLYDADSPDPALNRWCPLLEVVLWRVAVLGVLQPAAALLTALLLCPLAAAVLLVGEHIHPPSPPSSYRPTDVNCWT

Summary

EMBL
CT955980    CBH09249.1    KC469893    AGC92671.2    RSAL01000145    RVE45926.1    + More
KQ459232    KPJ02598.1    GEZM01050708    JAV75428.1    CH902617    KPU80844.1    NEVH01024535    PNF16892.1    PNF16890.1    GECZ01008993    JAS60776.1    CH478020    EAT34353.1    EDV44393.1    KPU80845.1    CH964232    EDW81624.1    KRF99500.1    GAKP01019029    GAKP01019027    JAC39925.1    JXUM01108785    JXUM01108786    JXUM01108787    GBXI01013390    GBXI01003691    JAD00902.1    JAD10601.1    JRES01000249    KNC32987.1    GAKP01019031    JAC39921.1    GEZM01050711    GEZM01050709    JAV75427.1    GDHF01018942    GDHF01005287    JAI33372.1    JAI47027.1    GGFM01003459    MBW24210.1    GDHF01028661    GDHF01003331    JAI23653.1    JAI48983.1    GGFK01004546    MBW37867.1    CM000070    EIM52809.1    CH479182    EDW34264.1    EAL28498.2    OUUW01000008    SPP84378.1    GGFK01004330    MBW37651.1    GGFK01004104    MBW37425.1    GGFK01004094    MBW37415.1    GEDC01017518    GEDC01017494    GEDC01010789    JAS19780.1    JAS19804.1    JAS26509.1    ADMH02000180    ETN67472.1    GGFJ01000749    MBW49890.1    CP012526    ALC46616.1    DS235179    EEB13018.1    CH916369    EDV92856.1    CH933806    EDW14870.2    GEZM01050707    JAV75430.1    KQ434931    KZC11804.1    GL449185    EFN83158.1    KQ976402    KYM92296.1    AJWK01030433    AJWK01030434    ADTU01006152    ADTU01006153    ADTU01006154    KQ982138    KYQ59700.1    APGK01058767    KB741291    ENN70608.1    KQ981619    KYN39251.1    KQ980762    KYN13560.1    CCAG010014354    GFDL01008769    JAV26276.1    JXJN01005276    GFDL01008805    JAV26240.1    UFQS01000590    UFQT01000590    SSX05179.1    SSX25540.1    GFDF01010987    JAV03097.1    DS231922    EDS26650.1    KZ288308    PBC28730.1    GL888373    EGI62099.1    APCN01005809    GL443425    EFN62073.1    NNAY01003297    OXU19664.1    KQ414608    KOC69407.1    LBMM01002835    KMQ94296.1    AAAB01008898    EAA09220.5    KQ971363    EFA09040.2    GDHF01026498    JAI25816.1    GDHF01000111    JAI52203.1    AXCM01004942    GFDL01008748    JAV26297.1    GBYB01002819    GBYB01002820    JAG72586.1    JAG72587.1    GBYB01002817    JAG72584.1    AXCN02001559    KQ977743    KYN00183.1    GFDL01008763    JAV26282.1    AGBW02008375    OWR53556.1    GGMR01016720    MBY29339.1   
Interpro
IPR036640   ABC1_TM_sf       
SUPFAM
SSF90123   SSF90123       

Ontologies

Topology

Length:
439
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
85.77117
Exp number, first 60 AAs:
0.00541
Total prob of N-in:
0.78915
outside
1  -  311
TMhelix
312  -  334
inside
335  -  340
TMhelix
341  -  363
outside
364  -  394
TMhelix
395  -  417
inside
418  -  439
 
 

Population Genetic Test Statistics

Pi
149.145432
Theta
145.311852
Tajima's D
-0.924266
CLR
10.731074
CSRT
0.153042347882606
Interpretation
Uncertain
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