Gene

KWMTBOMO10090

Pre Gene Modal

BGIBMGA005547

Annotation

PREDICTED:_transcription_factor_Adf-1-like_[Amyelois_transitella]

Location

Bomo_Chr17(+):2158184-2164259      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.217

CDS

ATGAACGAACTAGACCTGATCAAAGAAGTTGAGAAACGTCCTATACTCTATGATAAATCCGTAAGCGGATTTAACAAAACGAAACTCAGAGATGATGCCTGGAAAGAGGTGCAAGAAGCTCTTAATGTTACAGAATCCGAGTGCAAAAAACGCTGGAGATCTCTGCGTGACTCCTTCATAAAATTACAGCGAACCCATGGAGGTCGTACGAGGTGGCCATATCATCAGGCGATGCGTTTTCTCCTGCCACATATAGAACCTAAGGCGGAAACCGGAATAAAAAAAGAGGAGGATTCCGATCCCGAAGAAGAAGTGGCAAGACAGCGAGCTATACAGAACCTTCCAGACTTCTCATTCAACCATGACAAATACGAAGACGACGAATTTTCAGAGCCATCGCCAAAGAAACAACGTCTCAACTCCACAGATGAAGAATCATGTCAACATTGTACTAGGACGGACCCAGACGAATTATTCTTGCTGAGTTGCGCTCCGACTTTAAAACGGTTGAATTCCAAGAAAAACGCGGTAGCTAGACTCAAGATACAACAAGTGCTTTACGAAGCGGCATTCGGCAGGGAAATGGACGCGTCTTCGGCCCAAGATCACATATATGACGAGCAAGATGATTGA

Protein

MNELDLIKEVEKRPILYDKSVSGFNKTKLRDDAWKEVQEALNVTESECKKRWRSLRDSFIKLQRTHGGRTRWPYHQAMRFLLPHIEPKAETGIKKEEDSDPEEEVARQRAIQNLPDFSFNHDKYEDDEFSEPSPKKQRLNSTDEESCQHCTRTDPDELFLLSCAPTLKRLNSKKNAVARLKIQQVLYEAAFGREMDASSAQDHIYDEQDD

Uniprot

H9J7Q5   A0A2H1VYR9   A0A212FIC8   A0A2A4JNT6   C9S262   L7X1D7   + More
A0A194QGL9   A0A194QS45   A0A1W4WQV2   D6WZA0   C4WX15   A0A2S2Q0Z0   A0A1B0G209   A0A1A9UDF4   A0A1B0A611   A0A2H8TP98   A0A1A9WUX6   J9K5V6   A0A1B0BC78   A0A182IZ45   A0A1A9XV79   A0A1I8PUZ1   A0A0L7LE77   A0A1W4X0K5   A0A1B0FHI1   J9KBR0   A0A3B4XFW6   A0A3Q3WAQ6   A0A096M6M6   A0A0P7Y8X8   A0A1A8J5L9   A0A1A8RMH5   A0A1A8BJ41   A0A1A8LKB3   A0A060WUF7   A0A3P9L6E3   A0A1A8UXG3   A0A3B4B9G9   A0A3B4T856   A0A3P9L6D0   A0A3Q2QPZ9   B9ELY0   A0A2A2KXI9   C1BXV3   A0A060WVS3   A0A3P8ZCE2   A0A0P4VMG0   A0A3Q1AN43   A0A2A2L251   A0A3P9DND5   A0A3N0Z5Y5   A0A2I4AP61   A0A3Q1JIN1  

Pubmed

19121390    22118469    23674305    26354079    18362917    19820115    + More
26227816    24755649    17554307    25463417    20433749    25069045    27129103    25186727   

EMBL

BABH01020287    BABH01020288    BABH01020289    BABH01020290    BABH01020291    ODYU01005286    + More
SOQ45989.1    AGBW02008409    OWR53470.1    NWSH01000985    PCG73244.1    CT955980    CBH09242.1    KC469893    AGC92666.1    KQ459232    KPJ02591.1    KQ461155    KPJ08343.1    KQ971372    EFA09743.1    AK342392    BAH72435.1    GGMS01002232    MBY71435.1    CCAG010006187    GFXV01003263    MBW15068.1    ABLF02029435    JXJN01011881    JTDY01001509    KOB73695.1    CCAG010019481    ABLF02017748    ABLF02030228    ABLF02033162    ABLF02055684    ABLF02061509    AYCK01001094    JARO02008890    KPP62202.1    HAED01018472    SBR04917.1    HAEH01018199    SBS07320.1    HADZ01003278    SBP67219.1    HAEF01006957    SBR44339.1    FR904638    CDQ68699.1    HADY01009641    HAEJ01011814    SBS52271.1    BT056655    ACM08527.1    LIAE01007525    PAV78716.1    BT079432    ACO13856.1    FR904771    CDQ71488.1    GDKW01003728    JAI52867.1    LIAE01007297    PAV80248.1    RJVU01007700    ROL53880.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000053240    UP000192223    + More
UP000007266    UP000092444    UP000078200    UP000092445    UP000091820    UP000007819    UP000092460    UP000075880    UP000092443    UP000095300    UP000037510    UP000261360    UP000261620    UP000028760    UP000034805    UP000193380    UP000265180    UP000261520    UP000261420    UP000265000    UP000087266    UP000218231    UP000265140    UP000257160    UP000265160    UP000192220    UP000265040   

PRIDE

H9J7Q5   

Pfam

PF10545   MADF_DNA_bdg        + More
PF02944   BESS
PF17921   Integrase_H2C2
PF17917   RT_RNaseH
PF00665   rve

Interpro

IPR004210   BESS_motif        + More
IPR006578   MADF-dom       
IPR039353   TF_Adf1       
IPR001584   Integrase_cat-core       
IPR012337   RNaseH-like_sf       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR041373   RT_RNaseH       
IPR001005   SANT/Myb       

SUPFAM

SSF53098   SSF53098       

Gene 3D

3.30.420.10    

CDD

cd00167  SANT

ProteinModelPortal

H9J7Q5   A0A2H1VYR9   A0A212FIC8   A0A2A4JNT6   C9S262   L7X1D7   + More
A0A194QGL9   A0A194QS45   A0A1W4WQV2   D6WZA0   C4WX15   A0A2S2Q0Z0   A0A1B0G209   A0A1A9UDF4   A0A1B0A611   A0A2H8TP98   A0A1A9WUX6   J9K5V6   A0A1B0BC78   A0A182IZ45   A0A1A9XV79   A0A1I8PUZ1   A0A0L7LE77   A0A1W4X0K5   A0A1B0FHI1   J9KBR0   A0A3B4XFW6   A0A3Q3WAQ6   A0A096M6M6   A0A0P7Y8X8   A0A1A8J5L9   A0A1A8RMH5   A0A1A8BJ41   A0A1A8LKB3   A0A060WUF7   A0A3P9L6E3   A0A1A8UXG3   A0A3B4B9G9   A0A3B4T856   A0A3P9L6D0   A0A3Q2QPZ9   B9ELY0   A0A2A2KXI9   C1BXV3   A0A060WVS3   A0A3P8ZCE2   A0A0P4VMG0   A0A3Q1AN43   A0A2A2L251   A0A3P9DND5   A0A3N0Z5Y5   A0A2I4AP61   A0A3Q1JIN1  

KEGG

101743339    K09427 Adh transcription factor 1 | (RefSeq) transcription factor Adf-1-like

GO

GO:0005634   GO:0003677   GO:0005667   GO:0015074   GO:0046872   GO:0004252   GO:0005515   GO:0005737   GO:0008152   GO:0016301   GO:0016773   GO:0016155   GO:0003824  

PANTHER

PTHR12243  

Subcellular location

Nucleus  

Length:

210

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04206

outside

1  -  210

 

 

Pi

167.379534

Theta

150.958315

Tajima's D

0.112052

CLR

1.46736

CSRT

0.407129643517824

Interpretation

Uncertain