Silkworm Genome Informatics Database

Gene

KWMTBOMO10072

Pre Gene Modal

BGIBMGA005540

Annotation

PREDICTED:_uncharacterized_protein_LOC106142577_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr17(+):1828764-1858209 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.662

CDS

ATGGCACGCAGGCAGTCAGTAATCGTAGCTACTCGAAGCGAAACAGCGAACGGATCACCTGAAGCAAAGCGGAAGAACGAGCTGGCTTTGTTGGAAGGAATGGCGAATTCCGGAGGCTGGAGTGAGGAGCCGGTCCCTAAGGATAAGCAGAGGCCACCGGTGTACAATCCTGAGGACTACGCGACCTCACTGAAGAAGTGGGGCAAGAAGGCCGGCGCCGCGTCGCTCTATGAAGTCGACGCTACCCAGGAGATGAATAAATCCAGAACTCTACCGAACCCGAACAGAAAAGACTTCAGAAACCCAAGCATGAGTCTGGGCGAGGAAATGAGTCTACGCCAATTCGGTTCCCCGAGCGAGTTACTAGTGAAACTACGCGCCGATCTGAGACTTTCCTTCCCAAGTTTCGTCCAGGAGTTCGCCTGTGAGCCTCTAGATGGGGTCAGTCTGCTTCTGGAGCTGCTGCGGAACATTCAGCTCAGTCAGTCCGGAGAGGGAGCTAGAGGACCTCCGGCTGTGAGGAGACGGCCACTGCTGGATGAACTGGCGTGCTTACAGTGTCTATGGAGTTGCTGCCATCGATACCCTGACGGCGTCAGGAGACTCGTGGCAGGCCCCAACGGAGCTTATACTCTGACAGTCTGCATTATGTCTACTGTTAACAAATCCAGGATATTGGCATTGCAGCTCCTAACAAAAGCCTGCTACCCTCCAGCAAATGGCCACAGCATGATATCCGAAGCCCTATCCACGTTGCGTCTTCGTTACGGAGAGCCGGTCCGCTTCAGGTTTTTAGTCGGAATGCTGCAGAGCACTGGAGGCTCTGGTGAACTTCAGGCAGCCGGGTTAGCCTTCATCAATGGACTGCTGATCAGCACTCCGACTCCTCAGAGGAAGTTGTACATCCAGGCCGAATTGGAGCAGGCCGGTTTTGATATCGTCACTCTGAAGAAGATGGCAGCGAAACTTCAAACTCCCAATGACCTAATATCGAAGGAAATTGAAGCATACGAAAAACAATTGATAGATATTGACATACTAAGCGAAAAAGCGAACGTAGCTCAAAAGGAGAAAGACGCTCTTAGATACAAGCTGGACTTGCTCGAGAAGAGAGTTAAGATCCTGCAAGAAGAAAAAGGTATACTTTTATCCTTGGAAAAATGCCTGAAAGAGAAATGCTGTGAGCTGCAAGAGGAGGTGTCTTCGTTAAGATCTGAACACGGAAATTCTAATCGAAAGAAAAGTTTCGGAACGAAGAAAAAAAACTCGGTTCATAAAAACAGAGATGAGTCCTCACCACCGGAAGACGAAGGCATCAGCTCGTCAGAAAGGTCACTAAGTCCTGATGGAGATCCCCAAAGAGACTCCATGGTATACGAGATATTTAATATCAAAAACGAAACCTTTGACATGATACGCAACAAACGCATTCTGCACAAGAAAATTGAGAACAAAAAGACCGAATCAAAGAAGTCACTGGACGACGAAGACGAAACTACTATAGAAGACGTTATACAAGAACTCAGAAATATTGTTAACAAAGCTGAAACAGAGCAATACGCTAAAGACATCAGCGATGACAGATCATCTAGGTGCAACCAGAATTCGGAAATCAGTATTCCCATCAACAACATAGACCACAAGAACCACAGTGAAGAAAAAGAAGACTCGATCACCAGCACACGACACAGCATACAAATAAGAAACGGCACTGATTGTTCAGAGGATAACTTCGAAGATGACCAGGAGGCTGTAATCGTTCCGAGCAAAATCGTGCCTCATCCGCCGCGGAGAGCTAAGAGCTTGCTTCATTTGTTCACCCCACCGGTCGACCAAGGGTTATTGTACAATAAACCACCCCCAGATATATACGACGAGCATTTCTATTCCAGTGACGAGGGCTCGGATTCATTGCTCAGTTCGTCTCGGTGCCAAGGTCAGAACAGCAAAAAGGATTCAATTAACAGTTTCGATTTCAAGGAGTGTCGGGCAGTCTTTAATTCTACGGTTGAAAAAGACAAAGACGTGACCAGAACTAAGCGATCTAAGGCCCGTTCTAGAGACGAAAGTGCGAAGACTTCGGTGAGAAGAAGCGAATCGTTTCAAGCCTCAGAAAAAGGGTCCCGACAGCGAGAGCACATCGACAACCTCTTCAACCACGAAACAAATACGTCTAATAGAATTACACCCCAAAGATCAAGCAGCCGGGTCGACGAAATCGTTAGTTTGATAGAATCTAAGAAACTAACCAAAAGTCTGGATAGGATCGACGAAGGCCTGAACACAATGGTCGATATAGTCCTCCTAGATGAGCCCAAAAAGCCTGTCTGGCCTTACGAAAGACGGCAAAGATCCTGCTCTAGGACCAGCAGTGAAGTCGGGAACGAATCTCCCTTAGTTCCCGTTACCAGATCCACTAGCAAGCCGACTAACTTCCTGAAATACGACACGCGATCGTCCAGCAACAAACAAGAGTCAGCTAAAACGGAACCCAACCAGAAATTTTACTTACCCGGCGCTAAATTCACCACGGGAGGTTTCGAAAATCAACCATTCAACAGTTCCACCTTCTTAGTGAAACGTGGACACTCAAATACCGGGTTTTACAGTGGAAATCACATGTTGAGAAACGCACCGGCCAGCATGACGAGTCTGGTTGGCAATGGACACGCGGATTTAAAGAGGGCCTTGTCTCCAATGGGTTCGGTGACCAATTACGGAATCCACAAATTCGCGGACATGCCTTCCGGGCTGTATTAG

Protein

MARRQSVIVATRSETANGSPEAKRKNELALLEGMANSGGWSEEPVPKDKQRPPVYNPEDYATSLKKWGKKAGAASLYEVDATQEMNKSRTLPNPNRKDFRNPSMSLGEEMSLRQFGSPSELLVKLRADLRLSFPSFVQEFACEPLDGVSLLLELLRNIQLSQSGEGARGPPAVRRRPLLDELACLQCLWSCCHRYPDGVRRLVAGPNGAYTLTVCIMSTVNKSRILALQLLTKACYPPANGHSMISEALSTLRLRYGEPVRFRFLVGMLQSTGGSGELQAAGLAFINGLLISTPTPQRKLYIQAELEQAGFDIVTLKKMAAKLQTPNDLISKEIEAYEKQLIDIDILSEKANVAQKEKDALRYKLDLLEKRVKILQEEKGILLSLEKCLKEKCCELQEEVSSLRSEHGNSNRKKSFGTKKKNSVHKNRDESSPPEDEGISSSERSLSPDGDPQRDSMVYEIFNIKNETFDMIRNKRILHKKIENKKTESKKSLDDEDETTIEDVIQELRNIVNKAETEQYAKDISDDRSSRCNQNSEISIPINNIDHKNHSEEKEDSITSTRHSIQIRNGTDCSEDNFEDDQEAVIVPSKIVPHPPRRAKSLLHLFTPPVDQGLLYNKPPPDIYDEHFYSSDEGSDSLLSSSRCQGQNSKKDSINSFDFKECRAVFNSTVEKDKDVTRTKRSKARSRDESAKTSVRRSESFQASEKGSRQREHIDNLFNHETNTSNRITPQRSSSRVDEIVSLIESKKLTKSLDRIDEGLNTMVDIVLLDEPKKPVWPYERRQRSCSRTSSEVGNESPLVPVTRSTSKPTNFLKYDTRSSSNKQESAKTEPNQKFYLPGAKFTTGGFENQPFNSSTFLVKRGHSNTGFYSGNHMLRNAPASMTSLVGNGHADLKRALSPMGSVTNYGIHKFADMPSGLY

Uniprot

A0A3S2NVW0 A0A2H1X1X4 A0A194QS54 A0A212FHN3 A0A194QAX2 A0A0L7L534 + More
A0A0T6BFI0 A0A1Y1LN48 A0A1Y1LNA4 D6WXL1 U4U4U1 A0A1W4X5S0 A0A182JF61 A0A182M1A0 A0A182NNC5 A0A182RXG2 A0A182WCL5 A0A182PWC3 A0A182FLR5 A0A023EZ36

Pubmed

26354079 22118469 26227816 28004739 18362917 19820115 + More
23537049 25474469

EMBL

RSAL01000145 RVE45946.1 ODYU01012375 SOQ58654.1 KQ461155 KPJ08353.1 + More
AGBW02008481 OWR53252.1 KQ459232 KPJ02579.1 JTDY01002861 KOB70582.1 LJIG01000842 KRT86098.1 GEZM01051185 JAV75094.1 GEZM01051186 JAV75093.1 KQ971361 EFA08863.2 KB631935 ERL87328.1 AXCM01002532 GBBI01004235 JAC14477.1

Proteomes

UP000283053 UP000053240 UP000007151 UP000053268 UP000037510 UP000007266 + More
UP000030742 UP000192223 UP000075880 UP000075883 UP000075884 UP000075900 UP000075920 UP000075885 UP000069272

Pfam

PF06367   Drf_FH3        + More
PF06371   Drf_GBD
PF00650   CRAL_TRIO

Interpro

IPR010473   GTPase-bd        + More
IPR016024   ARM-type_fold
IPR014768   GBD/FH3_dom
IPR010472   FH3_dom
IPR011989   ARM-like
IPR036865   CRAL-TRIO_dom_sf
IPR036273   CRAL/TRIO_N_dom_sf
IPR011074   CRAL/TRIO_N_dom
IPR001251   CRAL-TRIO_dom

SUPFAM

SSF48371   SSF48371        + More
SSF52087   SSF52087
SSF46938   SSF46938

Gene 3D

1.25.10.10 3.40.525.10

CDD

cd00170 SEC14

ProteinModelPortal

A0A3S2NVW0 A0A2H1X1X4 A0A194QS54 A0A212FHN3 A0A194QAX2 A0A0L7L534 + More
A0A0T6BFI0 A0A1Y1LN48 A0A1Y1LNA4 D6WXL1 U4U4U1 A0A1W4X5S0 A0A182JF61 A0A182M1A0 A0A182NNC5 A0A182RXG2 A0A182WCL5 A0A182PWC3 A0A182FLR5 A0A023EZ36

PDB

4YDH E-value=2.26291e-07, Score=135

KEGG

105841728 no KO assigned | (RefSeq) uncharacterized LOC105841728

GO

GO:0017048 GO:0030036 GO:0003779 GO:0016043 GO:0005488 GO:0004568 GO:0006032 GO:0030677 GO:0016155 GO:0003824

Length:

919

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.22572

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01109

outside

1 - 919

Pi

198.463286

Theta

150.942391

Tajima's D

1.561085

CLR

0.385465

CSRT

0.8003599820009

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics